Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
SAGE Genie
  • Human SAGE Genie Tools
  • Downloads
  • Digital Karyotyping
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


SAGE Library Info

Library ID

New SAGE Library Name:SAGE_Kidney_carcinoma_B_D2
Old SAGE Library Name:
Organism:Homo sapiens
Library Keywords:kidney, bulk, transitional cell carcinoma, female, adult

Tag Info

#Total tags:101,013
#Tags excluding linkers:100,281
#Unique tags:32,412

Tissue Info

Tissue:kidney
Cell/Histology type:Kidney transitional cell carcinoma
Tissue preparation:bulk
Mutations:null
Patient age:73
Sex:female
Other info:Source: Clontech Total RNA, Cat.# 64012-1, Lot# 2120258. Right kidney; poorly differentiated with squamous differentiation (grade III-IV); extensive invasion seen in kidney, including renal tubules, lymphovascular areas and perinephric fat; no evidence of tumor in ureter, artery or vein.

Library Preparation Info

Tagging enzyme:BsmFI
Anchoring enzyme:NlaIII
Tissue or cell line supplier:Clontech, Total RNA, Cat. #64012-1, Lot # 2120258
Library preparer:Deric Olschner
Prepared in lab of:Dr. Greg Riggins
References:A. Lal et al., Cancer Res 59, 5403-7 (1999)