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SAGE Genie
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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


SAGE Library Info

Library ID

New SAGE Library Name:SAGE_Colon_adenocarcinoma_CL_Caco2
Old SAGE Library Name:
Organism:Homo sapiens
Library Keywords:adenocarcinoma, colon, non-normalized, short SAGE, cell line

Tag Info

#Total tags:64,110
#Tags excluding linkers:60,682
#Unique tags:23,111

Tissue Info

Tissue:colon
Cell/Histology type:adenocarcinoma
Tissue preparation:cell line
Mutations:RER- (replication error negitive cell line), has normal mismatch repair
Patient age:null
Sex:male
Other info:Colon, colorectal carcinoma cell line (RER-), ATCC: HTB-37.

Library Preparation Info

Tagging enzyme:BsmFI
Anchoring enzyme:NlaIII
Tissue or cell line supplier:J. Fogh
Library preparer:Lin Zhang
Prepared in lab of:Ken Kinzler and Bert Vogelstein, Johns Hopkins Medical Institute
References:L. Zhang et al., Science 276, 1268-1272 (1997)