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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


SAGE Library Info

Library ID

New SAGE Library Name:SAGE_Retina_Peripheral_normal_B_1
Old SAGE Library Name:
Organism:Homo sapiens
Library Keywords:retina, non-normalized, normal, bulk, short SAGE

Tag Info

#Total tags:59,661
#Tags excluding linkers:59,661
#Unique tags:22,812

Tissue Info

Tissue:retina
Cell/Histology type:normal peripheral retina
Tissue preparation:bulk
Mutations:null
Patient age:88
Sex:female
Other info:Patient had periocular malignancies that required exenteration of a normal eye as part of the clinically indicated surgical therapy. The eye was placed in saline after it was removed from the patient and peripheral retinal fragments were collected from regions outside the central arcades and frozen within 45 minutes of the surgical removal to ensure minimal degradation of mRNA molecules.

Library Preparation Info

Tagging enzyme:BsmFI
Anchoring enzyme:NlaIII
Tissue or cell line supplier:null
Library preparer:Dror Sharon
Prepared in lab of:Massachusetts Eye and Ear Ocular Molecular Genetics laboratory
References: