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SAGE Genie
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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

SAGE Library Info

Library ID

New SAGE Library Name:SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS7
Old SAGE Library Name:
Organism:Homo sapiens
Library Keywords:mammary gland, epithelium, carcinoma, antibody purified, non-normalized, short sage, female, adult

Tag Info

#Total tags:89,615
#Tags excluding linkers:89,184
#Unique tags:31,311

Tissue Info

Cell/Histology type:breast carcinoma epithelium
Tissue preparation:antibody purified
Patient age:29
Other info:Invasive breast tumor(~2cm), extensive high-grade comedo DCIS (~4 cm), positive lymph nodes. Purified using BerEP4 beads (Dynal). Library name in Cancer Cell, 2004, 6(1):17-32 "D-EPI-7 epithelial cells"

Library Preparation Info

Tagging enzyme:BsmFI
Anchoring enzyme:NlaIII
Tissue or cell line supplier:Andrea Richardson
Library preparer:Kornelia Polyak
Prepared in lab of:Kornelia Polyak, Dana-Farber Cancer Institute