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SAGE Genie
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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


SAGE Library Info

Library ID

New SAGE Library Name:SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS6
Old SAGE Library Name:
Organism:Homo sapiens
Library Keywords:mammary gland, epithelium, ductal, carcinoma, antibody purified, non-normalized, short sage, female

Tag Info

#Total tags:73,409
#Tags excluding linkers:72,857
#Unique tags:30,256

Tissue Info

Tissue:breast
Cell/Histology type:breast carcinoma epithelium
Tissue preparation:antibody purified
Mutations:null
Patient age:null
Sex:female
Other info:Extensive high-grade comedo DCIS (~8-10 cm). Purified using BerEP4 beads (Dynal).Library name in Cancer Cell, 2004, 6(1):17-32 "D-EPI-6 epithelial cells"

Library Preparation Info

Tagging enzyme:BsmFI
Anchoring enzyme:NlaIII
Tissue or cell line supplier:Amiel Cooper
Library preparer:Kornelia Polyak
Prepared in lab of:Kornelia Polyak, Dana-Farber Cancer Institute
References: