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SAGE Genie
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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


SAGE Library Info

Library ID

New SAGE Library Name:SAGE_Prostate_carcinoma_CL_PC3_Mock
Old SAGE Library Name:
Organism:Homo sapiens
Library Keywords:prostate, carcinoma, cell line, non-normalized, short SAGE

Tag Info

#Total tags:38,819
#Tags excluding linkers:38,819
#Unique tags:15,961

Tissue Info

Tissue:prostate
Cell/Histology type:prostate carcinoma
Tissue preparation:cell line
Mutations:null
Patient age:null
Sex:male
Other info:PC3 cells, Mock treatment, total number of 40,655 SAGE tags sequenced. 38,819 SAGE tags analyzed after clean-up (extraction of poly(A) tags, linker-generated tags, and tags originated from clones producing 4 tags or less).

Library Preparation Info

Tagging enzyme:BsmFI
Anchoring enzyme:NlaIII
Tissue or cell line supplier:ATCC
Library preparer:Nikki Holbrook
Prepared in lab of:Geriatrics Section, Yale University School of Medicine
References:O. Potapova et al., Cancer Res 62, 3257-63 (2002)