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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


SAGE Library Info

Library ID

New SAGE Library Name:mSAGE_Whole_body_teratocarcinoma_CL_P19_3+3
Old SAGE Library Name:
Organism:Mus musculus
Library Keywords:embryonic cell, teratocarcinoma, cell line, whole boday, differentiated, cardiomyocyte, short sage

Tag Info

#Total tags:
#Tags excluding linkers:53,022
#Unique tags:20,164

Tissue Info

Tissue:whole body
Cell/Histology type:null
Tissue preparation:cell line
Mutations:null
Patient age:null
Sex:unknown
Other info:SAGE identification of differentiation responsive genes in P19 embryonic cells induced to form cardiomyocytes in vitro. P19 embryonic carcinoma (EC) cells, induced to form cardiomyocytes in vitro, day 3+3.0 of differentiation protocol. Total number of 54,236 SAGE tags sequenced. 53,022 SAGE tags analyzed after clean-up (extraction of poly(A) tags, linker-generated tags, and tags originated from clones producing 4 tags or less). (NCBI name: P19 embryonic carcinoma (EC) cells, day 3+3.0)

Library Preparation Info

Tagging enzyme:BsmFI
Anchoring enzyme:NlaIII
Tissue or cell line supplier:null
Library preparer:null
Prepared in lab of:Sergey V. Anisimov, Kirill V . Tarasov , Daniel Riordon, Anna M. Wobus, Kenneth R. Boheler
References: