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SAGE Genie
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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


SAGE Library Info

Library ID

New SAGE Library Name:SAGE_Colon_adenocarcinoma_CL_HCT116
Old SAGE Library Name:
Organism:Homo sapiens
Library Keywords:adenocarcinoma, colon, non-normalized, short sage, cell line

Tag Info

#Total tags:59,572
#Tags excluding linkers:55,641
#Unique tags:24,585

Tissue Info

Tissue:colon
Cell/Histology type:adenocarcinoma
Tissue preparation:cell line
Mutations:Ras gene codon 13; wild type p53; RER+
Patient age:null
Sex:unknown
Other info:cell line derived from colorectal carcinoma. ATCC: CCL-247. Mutation in the Ras gene, codon 13. Wild type p53. RER+

Library Preparation Info

Tagging enzyme:BsmFI
Anchoring enzyme:NlaIII
Tissue or cell line supplier:M.G. Brattain
Library preparer:Lin Zhang
Prepared in lab of:Ken Kinzler and Bert Vogelstein, Johns Hopkins Medical Institute
References:L. Zhang et al., Science 276, 1268-1272 (1997)