Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
SAGE Genie
  • Human SAGE Genie Tools
  • Downloads
  • Digital Karyotyping
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Digital Northern Results

Search query: CTCAATAAAC

Color Code                              
Tags per 200,000 <2 <4 <8 <16 <32 <64 <128 <256 <512 >512

LibraryTotal Tags
in Library
Tag CountsTags per
200,000
Color
Code
mSAGE_Spleen_normal_TS23_MMD_SM0551276274265   
mSAGE_Branchial_arch_normal_TS17_MMD_SM0391362163957   
mSAGE_Skin_normal_E2F1_wildtype_B_20583351551   
mSAGE_Brain_normal_P20_MMD_SM0311526573647   
mSAGE_Brain_normal_P84-P90_LCM_SM1371043222344   
mSAGE_Spleen_normal_TS22_MMD_SM011596111343   
mSAGE_Brain_normal_P84-P90_LCM_SM1841181982338   
mSAGE_Skin_normal_E2F1_null_B_22531761037   
mSAGE_Urogenital_sinus_normal_TS18_MMD_SM0651436192737   
mSAGE_Brain_normal_TS20_LCM_SM0641478372736   
mSAGE_Brain_normal_P42_MMD_SM0501073661935   
mSAGE_Brain_normal_TS19_LCM_SM0871138932035   
mSAGE_Retina_normal_2.5 d_B_5256177932   
mSAGE_Adrenal_glands_normal_TS22_MMD_SM079998081530   
mSAGE_Branchial_arch_normal_TS15_MMD_SM043913591430   
mSAGE_Testis_normal_TS24_MMD_SM0441248331930   
mSAGE_Bladder_normal_P84_MMD_SM0371371892029   
mSAGE_Brain_normal_P35_LCM_SM1871021391529   
mSAGE_Urogenital_sinus_normal_TS24_MMD_SM0541141841729   
mSAGE_Brain_normal_P84-P90_MMD_SM0601248611828   
mSAGE_Heart_normal_TS19_MMD_SM0511336911928   
mSAGE_Limb_normal_TS23_MMD_SM1771127681628   
mSAGE_Testis_normal_P36_MMD_SM0911201001728   
mSAGE_Brain_normal_P84-P90_LCM_SM1831152621627   
mSAGE_Lung_normal_TS19_MMD_SM1351078161527   
mSAGE_Brain_normal_TS21_LCM_SM1671052081426   
mSAGE_Brain_normal_TS21_LCM_SM1421100701425   
mSAGE_Spleen_normal_P84_MMD_SM012858131125   
mSAGE_Bladder_normal_TS24_MMD_SM027821191024   
mSAGE_Brain_normal_TS25_LCM_SM1481212631524   
mSAGE_Brain_normal_P07_LCM_SM1851105041323   
mSAGE_Brain_normal_P84-P90_LCM_SM1471360391623   
mSAGE_Brain_normal_P84-P90_LCM_SM1941100561323   
mSAGE_Brain_normal_TS20_LCM_SM0531177171423   
mSAGE_Mammary_gland_adenocarcinoma_p53_null_B_1860161723   
mSAGE_Skin_normal_TS24_MMD_SM1341089651323   
mSAGE_Stomach_normal_TS25_MMD_SM0891101231323   
mSAGE_Heart_normal_TS15_MMD_SM0061064701222   
mSAGE_Small_intestine_normal_TS25_MMD_SM0941159191322   
mSAGE_Brain_normal_TS17_LCM_SM0671032301121   
mSAGE_Brain_normal_TS17_MMD_SM0561380661521   
mSAGE_Brain_normal_TS25_MMD_SM1111028231121   
mSAGE_Lung_normal_P0_MMD_SM0211775731921   
mSAGE_Mammary_gland_adenocarcinoma_p53_null_B_1756835621   
mSAGE_Ovaries_normal_P36_MMD_SM0761317481421   
mSAGE_Brain_normal_P07_LCM_SM1441486021520   
mSAGE_Brain_normal_P27_MMD_SM0401373891420   
mSAGE_Brain_normal_P35_LCM_SM1861085231120   
mSAGE_Brain_normal_TS15_LCM_SM0701171611220   
mSAGE_Brain_normal_TS20_LCM_SM1091159321220   
mSAGE_Brain_normal_TS25_LCM_SM1681081571120   
mSAGE_Lung_normal_P109_MMD_SM2121145281220   
mSAGE_Mammary_glands_normal_P84_MMD_SM0741069001120   
mSAGE_Muscle_normal_TS19_MMD_SM0421370751420   
mSAGE_Retina_normal_0.5d_B_5149132520   
mSAGE_Skin_normal_B_2457206620   
mSAGE_Skin_squamous_cell_carcinoma_B_2557574620   
mSAGE_Thymus_normal_P72_MMD_SM0241294641320   
mSAGE_Brain_normal_P07_LCM_SM1891038901019   
mSAGE_Brain_normal_P35_LCM_SM1901000971019   
mSAGE_Brain_normal_TS21_MMD_SM1541044481019   
mSAGE_Cerebellum_percoll_GCP61124619   
mSAGE_Limb_normal_TS22_MMD_SM0841248851219   
mSAGE_Mammary_gland_adenocarcinoma_p53_null_B_1961610619   
mSAGE_Pancreas_normal_TS21_MMD_SM22583740819   
mSAGE_Pancreas_normal_TS24_MMD_SM0151006511019   
mSAGE_Placenta_normal_TS11_MMD_SM0631039701019   
mSAGE_Testis_normal_TS22_MMD_SM0801126771119   
mSAGE_Urogenital_sinus_normal_TS24_MMD_SM0361248611219   
mSAGE_Whole_embryo_normal_TS26_CARM_wildtype_B_2673587719   
mSAGE_Brain_normal_TS23_MMD_SM1791080711018   
mSAGE_Stomach_normal_TS20_MMD_SM0721081951018   
mSAGE_Brain_normal_P84-P90_LCM_SM195105509917   
mSAGE_Pituitary_gland_normal_TS23_MMD_SM1331289851117   
mSAGE_Skin_normal_E2F1_wildtype_UV_B_2155985517   
mSAGE_Small_intestine_normal_TS20_MMD_SM095105320917   
mSAGE_Spleen_normal_TS26_MMD_SM0101135841017   
mSAGE_Urogenital_sinus_normal_TS24_MMD_SM0321172011017   
mSAGE_Vascular_endothelium_24hr_regenerating_liver_associated_AP_24hrRLiEC104872917   
mSAGE_Vascular_endothelium_LLC_tumor_associated_AP_LLCTEC103877917   
mSAGE_Brain_normal_P27_MMD_SM097111653916   
mSAGE_Kidney_normal_TS24_MMD_SM0821219171016   
mSAGE_Mammary_gland_normal_p53_wildtype_organoid_B_1261140516   
mSAGE_Brain_normal_P07_LCM_SM188105184815   
mSAGE_Brain_normal_P84-P90_LCM_SM180102933815   
mSAGE_Brain_normal_TS25_LCM_SM175105486815   
mSAGE_Lung_normal_TS19_MMD_SM0451299981015   
mSAGE_Lung_normal_TS26_MMD_SM0661554461215   
mSAGE_Retina_normal_10.5d_B_5551642415   
mSAGE_Skin_normal_TS21_MMD_SM12050845415   
mSAGE_Brain_normal_P84_LCM_SM110108882814   
mSAGE_Brain_normal_TS17_MMD_SM121126786914   
mSAGE_Brain_normal_TS20_LCM_SM052106766814   
mSAGE_Ovaries_normal_TS22_MMD_SM093107774814   
mSAGE_Bladder_normal_TS22_MMD_SM0411501511013   
mSAGE_Brain_normal_P35_LCM_SM191106565713   
mSAGE_Brain_normal_P84-P90_LCM_SM139105364713   
mSAGE_Brain_normal_P84-P90_LCM_SM152117634813   
mSAGE_Brain_normal_P84-P90_LCM_SM182107335713   
mSAGE_Brain_normal_P84-P90_LCM_SM196104850713   
mSAGE_Embyonic_stem_cell_normal_GM-CSF_IL3_CL30536213   
mSAGE_Kidney_normal_P84_MMD_SM1048830566113   
mSAGE_Large_intestine_normal_TS20_MMD_SM078105053713   
mSAGE_Mammary_gland_normal_p53_null_organoid_B_1458675413   
mSAGE_Pancreas_normal_TS17_MMD_SM161105033713   
mSAGE_Retina_normal_6.5d_B_5458501413   
mSAGE_Uterus_normal_P36_MMD_SM075106307713   
mSAGE_Vascular_endothelium_KM12SM_tumor_associated_AP_KM12TEC1669131113   
mSAGE_Brain_normal_P27_MMD_SM029115753712   
mSAGE_Brain_normal_P27_MMD_SM073109003712   
mSAGE_Brain_normal_TS20_LCM_SM088132781812   
mSAGE_Brain_normal_TS20_LCM_SM092115094712   
mSAGE_Heart_normal_TS20_MMD_SM003113010712   
mSAGE_Hippocampus_normal_B_LAL30931212   
mSAGE_Lung_normal_TS19_MMD_SM018145397912   
mSAGE_Mammary_gland_normal_C3(1)SV40Tag_B_7261877412   
mSAGE_Urogenital_sinus_normal_TS24_MMD_SM163131986812   
mSAGE_Brain_normal_P07_MMD_SM141106639611   
mSAGE_Brain_normal_P84-P90_MMD_SM201107041611   
mSAGE_Brain_normal_TS20_MMD_SM143108967611   
mSAGE_Cerebellum_CS_GCP+SHH85242511   
mSAGE_Heart_normal_TS19_MMD_SM008117622711   
mSAGE_Large_intestine_normal_TS25_MMD_SM096124382711   
mSAGE_MEF_normal_CL_SHE182348231411   
mSAGE_Retina_normal_TS20_B_4752319311   
mSAGE_Skin_normal_E2F1_null_UV_B_2353925311   
mSAGE_Uterus_normal_P0_MMD_SM171100516611   
mSAGE_Whole_embryo_normal_TS26_CARM_null_B_2789988511   
mSAGE_Adrenal_glands_normal_P84_MMD_SM059137762710   
mSAGE_Brain_normal_P84-P90_LCM_SM193109772610   
mSAGE_Branchial_arch_normal_TS17_MMD_SM105115192610   
mSAGE_Mammary_gland_normal_C3(1)SV40Tag_LGD1069_B_7359962310   
mSAGE_Mammary_glands_normal_P60_MMD_SM062135017710   
mSAGE_Mammary_glands_normal_P84_MMD_SM071110859610   
mSAGE_Pituitary_gland_normal_P0_MMD_SM16555720310   
mSAGE_Placenta_normal_TS22_MMD_SM049154731810   
mSAGE_Retina_normal_TS26_B_5054861310   
mSAGE_Thymus_normal_TS23_MMD_SM057110038610   
mSAGE_Brain_normal_P35_LCM_SM19210435359   
mSAGE_Brain_normal_P84-P90_LCM_SM13210570159   
mSAGE_Brain_normal_P84-P90_LCM_SM18110571959   
mSAGE_Brain_normal_P84-P90_MMD_SM09810844159   
mSAGE_Endoderm_normal_TS12_MMD_SM10810857959   
mSAGE_Heart_normal_TS15_MMD_SM00510719159   
mSAGE_Heart_normal_TS15_MMD_SM00712645969   
mSAGE_Mammary_glands_normal_P84_MMD_SM12910991159   
mSAGE_Pituitary_gland_normal_P0_MMD_SM1666097339   
mSAGE_T_cell_tolerated_skin_graft_normal_CL2209619   
mSAGE_Testis_normal_somatic_cell_adult_busulphan_B8148249   
mSAGE_Vascular_endothelium_48hr_regenerating_liver_associated_AP_48hrRLiEC17457789   
mSAGE_Whole_body_teratocarcinoma_CL_ATDC5_U2187519   
mSAGE_Brain_normal_TS21_LCM_SM19911569558   
mSAGE_Large_intestine_normal_TS20_MMD_SM1557113638   
mSAGE_Limb_normal_TS22_MMD_SM08511189558   
mSAGE_Lymph_nodes_normal_P63_MMD_SM22111289958   
mSAGE_Lymph_nodes_normal_P63_MMD_SM22212005458   
mSAGE_Lymph_nodes_normal_P84_MMD_SM13011140158   
mSAGE_Mammary_gland_normal_p53_null_pseudopregnant_organoid_B_156764938   
mSAGE_Neural_tube_normal_TS13_MMD_SM1269736448   
mSAGE_Pancreas_normal_TS22_MMD_SM2239814548   
mSAGE_Prostate_normal_P0_MMD_SM0258914448   
mSAGE_T_cell_naive_FS_614872128   
mSAGE_Vascular_endothelium_SW620_tumor_associated_AP_SW620TEC11203558   
mSAGE_Vascular_endothelium_normal_spleen_associated_AP_NSEC19292248   
mSAGE_Brain_normal_P35_MMD_SM13810212647   
mSAGE_Embryo_normal_TS11_MMD_SM09011105447   
mSAGE_Esophagus_normal_TS24_MMD_SM21010748047   
mSAGE_Heart_normal_TS19_MMD_SM00410853247   
mSAGE_Lung_normal_TS13_MMD_SM12711225147   
mSAGE_Retina_normal_10.5d_CRXnull_B_565261227   
mSAGE_Retina_normal_TS22_B_485473327   
mSAGE_Retina_normal_TS24_B_495488327   
mSAGE_Small_intestine_normal_TS20_MMD_SM1595151127   
mSAGE_Vascular_endothelium_normal_lung_associated_AP_NLgEC110483747   
mSAGE_Vascular_endothelium_normal_muscle_associated_AP_NMEC110729247   
mSAGE_Bone_marrow_normal_GM-CSF+IL10_FS3018516   
mSAGE_Bone_marrow_normal_GM-CSF_IL10_LPS_FS3103716   
mSAGE_Bone_normal_P84_MMD_SM2186492426   
mSAGE_Embryo_normal_TS11_MMD_SM09911594746   
mSAGE_Embryo_normal_TS11_MMD_SM11612316246   
mSAGE_Kidney_normal_P0_MMD_SM08612930446   
mSAGE_Mammary_gland_normal_p53_wildtype_pseudopregnant_organoid_B_166419726   
mSAGE_Pancreas_normal_P70_MMD_SM0179994436   
mSAGE_Pancreas_normal_P72_MMD_SM10211897846   
mSAGE_Testis_normal_P0_MMD_SM12811516746   
mSAGE_Vascular_endothelium_72hr_regenerating_liver_associated_AP_72hrRLiEC11506346   
mSAGE_Vascular_endothelium_CT26_tumor_associated_AP_CT26TEC9369236   
mSAGE_Vascular_endothelium_normal_kidney_associated_AP_NKEC12980516   
mSAGE_Brain_normal_TS17_LCM_SM06810469435   
mSAGE_Brain_normal_TS21_LCM_SM19711002035   
mSAGE_Brain_normal_TS23_LCM_SM17811792035   
mSAGE_Brain_normal_TS23_LCM_SM20010817935   
mSAGE_Brain_normal_TS25_LCM_SM23010239035   
mSAGE_Embryo_normal_TS7_MMD_SM10610313635   
mSAGE_Embryo_normal_TS7_MMD_SM20410995335   
mSAGE_Embryo_normal_TS7_MMD_SM20511019435   
mSAGE_Kidney_normal_TS20_MMD_SM12411334435   
mSAGE_Liver_normal_TS26_MMD_SM14911495235   
mSAGE_Neural_tube_normal_TS13_MMD_SM12510359435   
mSAGE_Neural_tube_normal_TS9_MMD_SM11710231235   
mSAGE_Ovaries_normal_P0_MMD_SM16411454435   
mSAGE_Pancreas_normal_TS22_MMD_SM01411140135   
mSAGE_Placenta_normal_TS15_MMD_SM04713748145   
mSAGE_Prostate_normal_P63_MMD_SM21910841335   
mSAGE_Thymus_normal_TS26_MMD_SM02210667935   
mSAGE_Urogenital_sinus_normal_TS24_MMD_SM17011724635   
mSAGE_Vascular_endothelium_EMT6_tumor_associated_AP_EMT6TEC11460535   
mSAGE_Brain_normal_P84-P90_LCM_SM15312099734   
mSAGE_Embryo_normal_TS34_MMD_SM1739441424   
mSAGE_Heart_normal_TS20_MMD_SM0029919724   
mSAGE_Kidney_normal_TS14_MMD_SM1694785114   
mSAGE_Skin_normal_P84_MMD_SM21412630634   
mSAGE_Small_intestine_normal_TS20_MMD_SM1514991114   
mSAGE_T_cell_TCR_alpha_beta_normal_FS_599158724   
mSAGE_Brain_normal_TS13_MMD_SM08111004723   
mSAGE_Brain_normal_TS19_MMD_SM13110950423   
mSAGE_Brain_normal_TS23_LCM_SM30110823023   
mSAGE_Embryo_normal_TS2_MMD_SM06110553323   
mSAGE_Endoderm_normal_TS13_MMD_SM10710297223   
mSAGE_Esophagus_normal_TS20_MMD_SM20910443823   
mSAGE_Heart_normal_TS13_MMD_SM14510364723   
mSAGE_Heart_normal_TS9_MMD_SM17410927223   
mSAGE_Hypothalamus_normal_adult_B_465506613   
mSAGE_Kidney_normal_TS19_MMD_SM11312051323   
mSAGE_Limb_normal_TS17_MMD_SM17210968123   
mSAGE_Liver_normal_TS14_MMD_SM00111578023   
mSAGE_Prostate_normal_P72_MMD_SM02611996423   
mSAGE_Retina_normal_4.5d_B_535025113   
mSAGE_Retina_normal_adult_MD_585105013   
mSAGE_Skin_normal_TS21_MMD_SM1195120213   
mSAGE_Testis_normal_P84_MMD_SM11812012123   
mSAGE_Vascular_endothelium_normal_liver_associated_AP_NLiEC110921823   
mSAGE_Whole_body_teratocarcinoma_CL_P19_3+35302213   
mSAGE_Embryo_normal_TS34_MMD_SM1469271612   
mSAGE_Embryonic_stem_cells_normal_MMD_SM2088718212   
mSAGE_Hindlimb_bud_normal_TS19_B6834912   
mSAGE_Liver_normal_P84_MMD_SM10017654022   
mSAGE_Pancreas_normal_TS26_MMD_SM0168929612   
mSAGE_T_cell_TCR_gamma_delta_normal_FS_609118912   
mSAGE_Vascular_endothelium_normal_brain_associated_AP_NBEC116723422   
mSAGE_Vascular_endothelium_normal_heart_associated_AP_NHEC18677512   
mSAGE_Brain_normal_TS13_MMD_SM08312010711   
mSAGE_Brain_normal_TS15_MMD_SM12210762811   
mSAGE_Endoderm_normal_TS13_MMD_SM11211052911   
mSAGE_Heart_normal_TS15_MMD_SM20610660711   
mSAGE_Pancreas_normal_P72_MMD_SM10310687211