Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
SAGE Genie
  • Human SAGE Genie Tools
  • Downloads
  • Digital Karyotyping
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Digital Northern Results

Search query: TTTTGAAGAT

Color Code                              
Tags per 200,000 <2 <4 <8 <16 <32 <64 <128 <256 <512 >512

LibraryTotal Tags
in Library
Tag CountsTags per
200,000
Color
Code
SAGE_Brain_medulloblastoma_B_H132259498723   
SAGE_Brain_medulloblastoma_B_H97285376921   
SAGE_Brain_medulloblastoma_B_H27572318719   
SAGE_Brain_medulloblastoma_B_H30660454619   
SAGE_Brain_astrocytoma_grade_III_B_H10551098861018   
SAGE_Uterus_Normal_B_hs0194645262359618   
SAGE_Lung_adenocarcinoma_B_136256316   
SAGE_Lymph_node_Lymphoma_B_hs0204517899342116   
SAGE_Thyroid_follicular_adenoma_B_TT005101578815   
SAGE_Brain_astrocytoma_grade_III_B_82899939714   
SAGE_Brain_oligodendroglioma_B_H98827864214   
SAGE_Spinal_cord_normal_B_154785414   
SAGE_Brain_astrocytoma_grade_III_B_R927107344713   
SAGE_Brain_ependymoma_B_R35373822513   
SAGE_Brain_medulloblastoma_B_98-09-P55885984613   
SAGE_Retinal_Pigment_Epithelium_normal_B_4PeriRPE90199613   
SAGE_Brain_ependymoma_B_23946653312   
SAGE_Brain_medulloblastoma_B_98-05-P60848451312   
SAGE_Brain_astrocytoma_grade_III_B_439107824611   
SAGE_Brain_glioblastoma_B_H111068986411   
SAGE_Brain_medulloblastoma_B_97-05-P01569971411   
SAGE_Brain_medulloblastoma_B_H87667404411   
SAGE_Pancreas_adenocarcinoma_B_91-1611333582211   
SAGE_Peripheral_Blood_Cancer_B_hs0429575684833211   
SAGE_Retina_normal_B_4cRet103701611   
SAGE_Brain_astrocytoma_grade_III_B_R140118733610   
SAGE_Brain_medulloblastoma_B_C60974612410   
SAGE_Eye_Retinoblastoma_B_hs03891243423263510   
SAGE_Peripheral_Blood_Cancer_B_hs0430639970533110   
SAGE_Skin_Normal_B_hs0272439755023510   
SAGE_Brain_fetal_normal_B_S1305546149   
SAGE_Brain_glioblastoma_B_R33610232259   
SAGE_Brain_normal_substantia_nigra_B_14177329   
SAGE_Breast_carcinoma_MD_DCIS4078329   
SAGE_Breast_metastatic_carcinoma_B_LN26034339   
SAGE_Muscle_Rhabdomyosarcoma_B_16127039   
SAGE_Prostate_carcinoma_CL_LNCaP-C4002929   
SAGE_Bladder_Cancer_B_hs026546401981938   
SAGE_Brain_astrocytoma_grade_III_B_H2729605948   
SAGE_Brain_astrocytoma_grade_II_B_H12711448958   
SAGE_Brain_ependymoma_B_R62812043158   
SAGE_Brain_medulloblastoma_B_98-05-P0408925848   
SAGE_Brain_medulloblastoma_B_DL76839238   
SAGE_Foreskin_normal_B_hs030539403501608   
SAGE_Skin_Normal_B_hs027752697892158   
SAGE_Bladder_Cancer_B_hs024133358011297   
SAGE_Brain_astrocyte_normal_CL_NHA55148127   
SAGE_Brain_astrocytoma_grade_III_B_40710831247   
SAGE_Brain_astrocytoma_grade_III_B_58410300847   
SAGE_Brain_astrocytoma_grade_II_B_H51610811647   
SAGE_Brain_glioblastoma_CL_28d11062447   
SAGE_Brain_medulloblastoma_B_96-04-P0195264527   
SAGE_Breast_carcinoma_epithelium_X_MUC1+_AP7514737   
SAGE_Breast_fibroadenoma_MD5568827   
SAGE_Breast_normal_epithelium_CD24+_AP_N57646937   
SAGE_Breast_normal_stroma_AP_17915237   
SAGE_Breast_normal_stroma_B_IDC85048527   
SAGE_Skin_Cancer_B_hs028336922391467   
SAGE_Stomach_normal_B_antrum2665317   
SAGE_Uterus_normal_B_hs019537184631467   
SAGE_Vascular_endothelium_hemangioma_B_1467568037   
SAGE_White_Blood_Cells_monocyte_depleted_mononuclear_cells_normal_AP_A15379527   
SAGE_Brain_ependymoma_B_11506237326   
SAGE_Brain_glioblastoma_control_CL_H2476042826   
SAGE_Brain_medulloblastoma_B_98-04-P1173257016   
SAGE_Brain_medulloblastoma_B_H4845746926   
SAGE_Brain_oligodendroglioma_B_10013244216   
SAGE_Lung_normal_B_18870836   
SAGE_Pancreas_carcinoma_CL_PL452955716   
SAGE_Pancreas_normal_CS_HX3198516   
SAGE_Retina_Peripheral_normal_B_15966126   
SAGE_Skin_Melanoma_B_hs027338817701196   
SAGE_Skin_Normal_B_hs02783042221946   
SAGE_Thyroid_follicular_carcinoma_B_TT00412466446   
SAGE_Thyroid_normal_B_00111593846   
SAGE_Vascular_normal_CS_VEGF+5731626   
SAGE_Brain_astrocytoma_grade_III_B_34310015835   
SAGE_Brain_astrocytoma_grade_II_B_H35910576435   
SAGE_Brain_astrocytoma_grade_II_B_H51811602235   
SAGE_Brain_astrocytoma_grade_II_B_H53010243935   
SAGE_Brain_ependymoblastoma_B_8193397515   
SAGE_Brain_ependymoma_B_H5806861425   
SAGE_Brain_ependymoma_B_R5127537925   
SAGE_Brain_medulloblastoma_B_12733861415   
SAGE_Brain_meningioma_grade_I_B_SF42716925325   
SAGE_Brain_normal_leptomeninges_B_AL27247325   
SAGE_Breast_carcinoma_B_IDC-36889125   
SAGE_Breast_carcinoma_MD_LCIS6783425   
SAGE_Breast_normal_myoepithelium_CD10+_AP_IDC76900625   
SAGE_Retina_Peripheral_normal_B_210531235   
SAGE_Retinal_Pigment_Epithelium_normal_B_4MacRPE7726225   
SAGE_Skin_Melanoma_B_hs027438952111115   
SAGE_Skin_Normal_B_hs027158076861515   
SAGE_Testis_Embryonal_Carcinoma_CL_hs021263701611855   
SAGE_Testis_Embryonal_Carcinoma_CL_hs021359354901565   
SAGE_Urothelium_normal_B_hs02393114307825   
SAGE_Vascular_endothelium_normal_liver_associated_AP_NLEC17775925   
SAGE_Vein_normal_B_hs023067556221855   
SAGE_Vein_normal_B_hs023761356881675   
SAGE_Bladder_Cancer_B_hs024062164261464   
SAGE_Bladder_Cancer_B_hs02664244612884   
SAGE_Bone_Marrow_Normal_FS_hs040448425471064   
SAGE_Brain_Medulloblastoma_CL_425Otx2siRNA9729124   
SAGE_Brain_Medulloblastoma_CL_UW228-N9493724   
SAGE_Brain_astrocytoma_grade_II_B_H50112830934   
SAGE_Brain_ependymoma_B_R5108407324   
SAGE_Brain_glioblastoma_CS_TA24667814   
SAGE_Brain_medulloblastoma_B_98-04-P4944306814   
SAGE_Brain_medulloblastoma_B_DL58367124   
SAGE_Brain_medulloblastoma_CL_H3414392014   
SAGE_Brain_normal_cerebellum_B_BB5424050014   
SAGE_Breast_carcinoma_B_DCIS-54309814   
SAGE_Breast_carcinoma_CL_MDA435H244663114   
SAGE_Breast_carcinoma_metastasis_B_24979414   
SAGE_Colon_normal_B_NC24847914   
SAGE_Embryonic_stem_cell_normal_CL_hs02383636083904   
SAGE_Lymph_Node_normal_B_19942624   
SAGE_Ovary_adenocarcinoma_B_OVT-64144314   
SAGE_Ovary_normal_CL_IOSE29EC-114715914   
SAGE_Prostate_carcinoma_CL_LNCaP-T4354214   
SAGE_Retina_Retinoblastoma_B_18849024   
SAGE_Skin_Cancer_B_hs02803618498904   
SAGE_Skin_Cancer_B_hs02843892507864   
SAGE_Skin_Melanoma_B_hs02754128221934   
SAGE_Skin_Normal_B_hs028165170891364   
SAGE_Bladder_Cancer_B_hs02645833968973   
SAGE_Bone_Marrow_AML_FS_CD34+CD38+6151913   
SAGE_Brain_Medulloblastoma_CL_425C26264213   
SAGE_Brain_astrocytoma_grade_III_B_H97010698223   
SAGE_Brain_astrocytoma_grade_II_B_H38810628523   
SAGE_Brain_ependymoma_B_13945631413   
SAGE_Brain_ependymoma_B_R102312269023   
SAGE_Brain_ependymoma_B_R5825218913   
SAGE_Brain_glioblastoma_B_GBM10625976213   
SAGE_Brain_glioblastoma_B_H135312480523   
SAGE_Brain_glioblastoma_CL_H54+EGFRvIII5698213   
SAGE_Breast_Carcinoma_CD24+_C2_IDC344720960843   
SAGE_Breast_Carcinoma_CD24+_C4_IDC403570910573   
SAGE_Breast_carcinoma_CL_MCF7control_0h5987713   
SAGE_Breast_carcinoma_CL_MCF7estradiol_10H6072513   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC76509113   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS-35740213   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC86652013   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_IDC285795613   
SAGE_Breast_carcinoma_epithelium_CD44+_AP_PE25234213   
SAGE_Breast_carcinoma_epithelium_PROCR+_AP_IDC295408013   
SAGE_Breast_normal_B_gestational hyperplasia16170413   
SAGE_Breast_phyllodes_tumor_fibroblasts_AP_0702025957513   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES240143283   
SAGE_Liver_cholangiocarcinoma_CL_K45297313   
SAGE_Liver_normal_B_16630813   
SAGE_Lymph_node_Lymphoma_B_hs01964791481803   
SAGE_Retina_Macula_normal_B_4Mac10141723   
SAGE_Retina_Peripheral_normal_B_4Peri12669123   
SAGE_Retina_macula_normal_B_HMAC210241723   
SAGE_Skin_Normal_B_hs02824411636713   
SAGE_Vascular_endothelium_normal_breast_associated_P1H12+_AP_15702313   
SAGE_White_Blood_Cells_monocyte_normal_AP_P110115823   
SAGE_Bone_marrow_normal_AP_CD34+/CD38-/lin-8639112   
SAGE_Brain_Medulloblastoma_CL_UW228-V28082712   
SAGE_Brain_astrocytoma_grade_II_B_H5638856812   
SAGE_Brain_glioblastoma_B_R709909912   
SAGE_Brain_medulloblastoma_B_97-05-P3127429512   
SAGE_Brain_normal_cortex_B_BB5429423312   
SAGE_Brain_normal_peds_cortex_B_H15717755412   
SAGE_Breast_Carcinoma_CD24+_C1_IDC314286604532   
SAGE_Breast_Carcinoma_SSEA4+_C7_IDC403381240462   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC87396712   
SAGE_Breast_carcinoma_epithelium_BerEP4+AP_IDC77341012   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N57617312   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Normal_Oxygen7928412   
SAGE_Colon_carcinoma_CL_Hct116_wildtype_p53_Normal_Oxygen8039812   
SAGE_Embryo_Pre-Cancer_B_hs03246893016782   
SAGE_Embryonic_stem_cell_BG01_normal_p20_CL_SHE1920166832   
SAGE_Embryonic_stem_cell_H1_normal_p54_CL_SHE1621821432   
SAGE_Embryonic_stem_cell_HES3_normal_p16_CL_SHE1020535332   
SAGE_Embryonic_stem_cell_HES4_normal_p36_CL_SHE1120923232   
SAGE_Esophagus_Dysplasia_B_LGD017490412   
SAGE_Esophagus_Normal_B_CN017563412   
SAGE_GallBladder_Adenocarcinoma_B_HAIIb6698812   
SAGE_Lung_adenocarcinoma_MD_L108688712   
SAGE_Lymph_Node_Lymphoma_B_17200812   
SAGE_Placenta_first_trimester_normal_B_18926512   
SAGE_Prostate_normal_epithelium_CS_confluent7189712   
SAGE_Bone_Marrow_Cancer_FS_hs04054900037401   
SAGE_Brain_glioblastoma_B_H83310060011   
SAGE_Brain_glioblastoma_B_R2010105311   
SAGE_Brain_glioblastoma_CL_4d11521211   
SAGE_Breast_Carcinoma_CD24+_C3_IDC384117410211   
SAGE_Breast_Carcinoma_EPCR+_C5_IDC273796568281   
SAGE_Breast_Carcinoma_EPCR+_C6_IDC314208755291   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGD010986211   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES115173511   
SAGE_Placenta_normal_B_111808311   
SAGE_Skin_Cancer_B_hs02795703298351   
SAGE_Skin_Melanoma_B_hs02765631800311   
SAGE_White_Blood_Cells_monocytes_normal_AP_C110165611   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P110287311   
SAGE_Breast_Normal_Epithelium_CD24+_N1_N33964688020   
SAGE_Breast_Normal_Epithelium_CD24+_N3_N47303600210   
SAGE_Breast_Normal_Epithelium_CD44+_N7_N5811007864220   
SAGE_Embryonic_stem_cell_H13_normal_p22_CL_SHE1522110110   
SAGE_Embryonic_stem_cell_H14_normal_p22_CL_SHE1421217010   
SAGE_Embryonic_stem_cell_H1_normal_p31_CL_SHE1727620310   
SAGE_Embryonic_stem_cell_H7_normal_p33_CL_SHE1327246510