Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
SAGE Genie
  • Human SAGE Genie Tools
  • Downloads
  • Digital Karyotyping
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Digital Northern Results

Search query: TTTGCTGAAC

Color Code                              
Tags per 200,000 <2 <4 <8 <16 <32 <64 <128 <256 <512 >512

LibraryTotal Tags
in Library
Tag CountsTags per
200,000
Color
Code
SAGE_Retina_Peripheral_normal_B_1596611240   
SAGE_Breast_metastatic_carcinoma_B_LN2603431239   
SAGE_Brain_normal_substantia_nigra_B_141773523   
SAGE_Stomach_normal_B_antrum26653322   
SAGE_Stomach_normal_MD_14S73353719   
SAGE_Breast_carcinoma_B_DCIS-543098418   
SAGE_Retinal_Pigment_Epithelium_normal_B_4MacRPE77262718   
SAGE_Retina_macula_normal_B_HMAC2102417917   
SAGE_Brain_glioblastoma_B_H137149338416   
SAGE_Brain_normal_thalamus_B_124015216   
SAGE_Breast_carcinoma_metastasis_B_249794416   
SAGE_Pancreas_adenocarcinoma_CL_Panc124749216   
SAGE_Breast_carcinoma_B_IDC-464095515   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_IDC2639361315   
SAGE_Prostate_adenocarcinoma_MD_PR31764951515   
SAGE_Retina_Macula_normal_B_4Mac101417815   
SAGE_Retina_Peripheral_normal_B_2105312815   
SAGE_Retina_normal_B_4cRet103701815   
SAGE_Retinal_Pigment_Epithelium_normal_B_4PeriRPE90199715   
SAGE_Retina_Peripheral_normal_B_4Peri126691914   
SAGE_Brain_medulloblastoma_B_H30660454413   
SAGE_Breast_carcinoma_CL_ZR75_1_untreated32303212   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS-266168412   
SAGE_Colon_normal_B_NC149610312   
SAGE_Bladder_Cancer_B_hs0265464019826711   
SAGE_Brain_medulloblastoma_B_H97285376511   
SAGE_Breast_Carcinoma_CD24+_C3_IDC38411741024311   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_PE250132311   
SAGE_Peritoneum_normal_B_1353527311   
SAGE_Retina_Pigment_epithelium_normal_B_153666311   
SAGE_Brain_normal_peds_cortex_B_H157177554410   
SAGE_Breast_carcinoma_CL_MCF7control_0h59877310   
SAGE_Breast_phyllodes_tumor_fibroblasts_AP_07020259575310   
SAGE_Esophagus_Dysplasia_B_HGD0278611410   
SAGE_Prostate_normal_MD_PR31759277310   
SAGE_Breast_carcinoma_B_CT15_IDC2184019   
SAGE_Breast_normal_B_gestational hyperplasia16170439   
SAGE_Fibroblasts_CL_postcrisis2183319   
SAGE_Uterus_endometrium_normal_CS_DI12199119   
SAGE_Bladder_Cancer_B_hs024062164262798   
SAGE_Brain_Medulloblastoma_CL_UW228-N9493748   
SAGE_Brain_ependymoma_B_2394665328   
SAGE_Breast_carcinoma_B_IDC-36889138   
SAGE_Breast_metastatic_carcinoma_B_LN14508728   
SAGE_Brain_astrocytoma_grade_III_B_40710831247   
SAGE_Brain_astrocytoma_grade_III_B_R92710734447   
SAGE_Brain_astrocytoma_grade_II_B_H51610811647   
SAGE_Breast_carcinoma_associated_myoepithelium_CD10+_AP_DCIS68145237   
SAGE_Breast_carcinoma_epithelium_CD44+_AP_ASC35247827   
SAGE_Breast_normal_myoepithelium_CL_HME505551627   
SAGE_Esophagus_Normal_B_CN017563437   
SAGE_GallBladder_Normal_B_HN8570637   
SAGE_Lymph_node_Lymphoma_B_hs020451789932007   
SAGE_Bladder_Cancer_B_hs024133358011126   
SAGE_Bone_marrow_normal_AP_CD34+/CD38-/lin-8639136   
SAGE_Brain_astrocytoma_grade_II_B_H51811602246   
SAGE_Brain_ependymoma_B_11506237326   
SAGE_Brain_medulloblastoma_B_H13225949826   
SAGE_Brain_medulloblastoma_B_H4845746926   
SAGE_Brain_meningioma_grade_III_B_SF23665978626   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC86652026   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N15722226   
SAGE_Lymph_Node_normal_B_19942636   
SAGE_Prostate_carcinoma_CL_LNCaP_no-DHT6216026   
SAGE_Retina_Retinoblastoma_B_18849036   
SAGE_Testis_Embyronal_Carcinoma_B_16635226   
SAGE_Brain_astrocytoma_grade_II_B_H53010243935   
SAGE_Brain_ependymoblastoma_B_8193397515   
SAGE_Brain_ependymoma_B_R3537382225   
SAGE_Brain_glioblastoma_hypoxia_CL_H2477176525   
SAGE_Brain_medulloblastoma_B_12733861415   
SAGE_Brain_medulloblastoma_B_97-05-P0156997125   
SAGE_Brain_medulloblastoma_B_C6097461225   
SAGE_Brain_medulloblastoma_B_H8766740425   
SAGE_Brain_meningioma_grade_I_B_SF42716925325   
SAGE_Breast_Carcinoma_CD24+_C4_IDC403570910955   
SAGE_Breast_carcinoma_B_95-2593936415   
SAGE_Breast_carcinoma_B_95-3476707025   
SAGE_Breast_carcinoma_MD_LCIS6783425   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC87396725   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS67285725   
SAGE_Breast_carcinoma_epithelium_X_MUC1+_AP7514725   
SAGE_Breast_normal_FS_NER3456515   
SAGE_Foreskin_normal_B_hs030539403501145   
SAGE_Lymph_Node_Lymphoma_B_17200825   
SAGE_Stomach_carcinoma_B_xenograft_X1016974925   
SAGE_Testis_Embryonal_Carcinoma_CL_hs021359354901515   
SAGE_Uterus_Normal_B_hs019464526231645   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P110287335   
SAGE_Brain_ependymoma_B_R62812043134   
SAGE_Brain_glioblastoma_B_H135312480534   
SAGE_Brain_glioblastoma_B_R709909924   
SAGE_Brain_medulloblastoma_B_98-05-P0408925824   
SAGE_Brain_medulloblastoma_B_98-05-P6084845114   
SAGE_Brain_medulloblastoma_CL_mhh-14785814   
SAGE_Brain_normal_cerebellum_B_BB5424050014   
SAGE_Breast_carcinoma_CL_MDA435C4727014   
SAGE_Breast_carcinoma_CL_MDA435H244663114   
SAGE_Breast_carcinoma_MD_DCIS4078314   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS78918424   
SAGE_Breast_normal_epithelium_CD44+_AP_N58046424   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIFK08594424   
SAGE_Colon_adenocarcinoma_B_Tu984137114   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES2401432104   
SAGE_Eye_Retinoblastoma_B_hs0389124342322694   
SAGE_Kidney_normal_B_14099314   
SAGE_Liver_cholangiocarcinoma_B_K2D4685314   
SAGE_Lung_adenocarcinoma_MD_L108688724   
SAGE_Lung_normal_CL_L154222614   
SAGE_Prostate_carcinoma_CL_LNCaP-C4002914   
SAGE_Skin_Normal_B_hs02783042221724   
SAGE_Stomach_adenocarcinoma_MD_G3294680214   
SAGE_Urothelium_normal_B_hs02393114307764   
SAGE_Bone_Marrow_AML_FS_CD34+CD38+6151913   
SAGE_Brain_Medulloblastoma_CL_425C26264213   
SAGE_Brain_astrocyte_normal_CL_NHA55148113   
SAGE_Brain_astrocytoma_grade_III_B_H105510988623   
SAGE_Brain_astrocytoma_grade_II_B_H50112830923   
SAGE_Brain_ependymoma_B_13945631413   
SAGE_Brain_ependymoma_B_R4555182513   
SAGE_Brain_ependymoma_B_R5825218913   
SAGE_Brain_fetal_normal_B_S130554663   
SAGE_Brain_glioblastoma_B_GBM10625976213   
SAGE_Brain_glioblastoma_B_R2010105323   
SAGE_Brain_glioblastoma_B_R33610232223   
SAGE_Brain_glioblastoma_control_CL_H2476042813   
SAGE_Brain_meningioma_grade_I_B_SF44655464713   
SAGE_Breast_carcinoma_B_DCIS-46060513   
SAGE_Breast_carcinoma_CL_MCF7estradiol_10H6072513   
SAGE_Breast_carcinoma_CL_MCF7estradiol_3h6016213   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC76509113   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC96353913   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS-35740213   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_IDC285795613   
SAGE_Breast_carcinoma_epithelium_CD44+_AP_PE25234213   
SAGE_Breast_fibroadenoma_MD5568813   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N156399413   
SAGE_Breast_normal_organoid_B5818113   
SAGE_Embryonic_stem_cell_H1_normal_p31_CL_SHE1727620353   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES115173533   
SAGE_Liver_cholangiocarcinoma_B_K16031913   
SAGE_Liver_cholangiocarcinoma_CL_K35484213   
SAGE_Muscle_normal_B_old5388913   
SAGE_Ovary_adenocarcinoma_B_OVT-75351413   
SAGE_Placenta_hydatidiform_mole_B_110167723   
SAGE_Prostate_carcinoma_B_pool26603413   
SAGE_Skin_Melanoma_B_hs02733881770723   
SAGE_Skin_Melanoma_B_hs02743895211673   
SAGE_Skin_Normal_B_hs02724397550683   
SAGE_Skin_Normal_B_hs02775269789943   
SAGE_Testis_Embryonal_Carcinoma_CL_hs021263701611023   
SAGE_Universal_reference_human_RNA_CL5172913   
SAGE_White_Blood_Cells_lung_macrophage_normal_AP_L15187213   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P25029713   
SAGE_Bone_marrow_normal_AP_CD34+/CD38+/lin+8159512   
SAGE_Brain_Medulloblastoma_CL_425Otx2siRNA9729112   
SAGE_Brain_astrocytoma_grade_III_B_8289993912   
SAGE_Brain_astrocytoma_grade_III_B_H2729605912   
SAGE_Brain_ependymoma_B_R5108407312   
SAGE_Brain_glioblastoma_B_H11106898612   
SAGE_Brain_medulloblastoma_B_97-05-P3127429512   
SAGE_Brain_medulloblastoma_B_98-09-P5588598412   
SAGE_Brain_medulloblastoma_B_DL58367112   
SAGE_Brain_normal_cortex_B_BB5429423312   
SAGE_Brain_normal_leptomeninges_B_AL27247312   
SAGE_Breast_carcinoma_associated_stroma_B_IDC76802412   
SAGE_Breast_normal_myoepithelium_CD10+_AP_IDC76900612   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N57617312   
SAGE_Breast_normal_stroma_AP_17915212   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Anoxia7905312   
SAGE_Esophagus_Dysplasia_B_LGD017490412   
SAGE_GallBladder_Adenocarcinoma_B_HAIIb6698812   
SAGE_GallBladder_Adenocarcinoma_B_NAM017854812   
SAGE_Prostate_normal_epithelium_CS_confluent7189712   
SAGE_Skin_Cancer_B_hs02803618498402   
SAGE_Skin_Melanoma_B_hs02765631800662   
SAGE_Skin_Normal_B_hs02816517089942   
SAGE_Skin_Normal_B_hs02824411636632   
SAGE_Stomach_adenocarcinoma_MD_HG79371412   
SAGE_Vascular_endothelium_hemangioma_B_1467568012   
SAGE_Vein_normal_B_hs02306755622792   
SAGE_White_Blood_Cells_monocyte_normal_AP_A19991312   
SAGE_White_Blood_Cells_monocytes_normal_AP_A29878612   
SAGE_Bladder_Cancer_B_hs02645833968321   
SAGE_Bladder_Cancer_B_hs02664244612251   
SAGE_Brain_astrocytoma_grade_III_B_34310015811   
SAGE_Brain_astrocytoma_grade_III_B_43910782411   
SAGE_Brain_astrocytoma_grade_III_B_H97010698211   
SAGE_Brain_astrocytoma_grade_II_B_H12711448911   
SAGE_Brain_astrocytoma_grade_II_B_H35910576411   
SAGE_Brain_astrocytoma_grade_II_B_H38810628511   
SAGE_Breast_Carcinoma_CD24+_C1_IDC314286604251   
SAGE_Breast_Carcinoma_EPCR+_C5_IDC273796568191   
SAGE_Breast_Carcinoma_EPCR+_C6_IDC314208755301   
SAGE_Breast_Carcinoma_SSEA4+_C7_IDC403381240201   
SAGE_Breast_Normal_Epithelium_CD44+_N6_N48104876581   
SAGE_Embryonic_stem_cell_BG01_normal_p20_CL_SHE1920166821   
SAGE_Embryonic_stem_cell_H1_normal_p54_CL_SHE1621821421   
SAGE_Embryonic_stem_cell_H7_normal_p33_CL_SHE1327246521   
SAGE_Embryonic_stem_cell_HES3_normal_p16_CL_SHE1020535321   
SAGE_Kidney_carcinoma_B_D210028111   
SAGE_Peripheral_Blood_Cancer_B_hs04295756848411   
SAGE_Peripheral_Blood_Cancer_B_hs04306399705621   
SAGE_Skin_Cancer_B_hs02795703298531   
SAGE_Skin_Cancer_B_hs02833692239331   
SAGE_Skin_Cancer_B_hs02843892507361   
SAGE_Skin_Melanoma_B_hs02754128221351   
SAGE_Skin_Normal_B_hs02715807686361   
SAGE_Thyroid_follicular_adenoma_B_TT00510157811   
SAGE_Uterus_normal_B_hs01953718463311   
SAGE_White_Blood_Cells_monocyte_normal_AP_P110115811   
SAGE_White_Blood_Cells_monocytes_normal_AP_C110165611   
SAGE_Bone_Marrow_Cancer_FS_hs04054900037110   
SAGE_Breast_Carcinoma_CD24+_C2_IDC344720960120   
SAGE_Breast_Normal_Epithelium_CD24+_N1_N339646880300   
SAGE_Breast_Normal_Epithelium_CD24+_N2_N3513584223350   
SAGE_Breast_Normal_Epithelium_CD24+_N3_N473036002100   
SAGE_Breast_Normal_Epithelium_CD24+_N4_N48180227430   
SAGE_Breast_Normal_Epithelium_CD44+_N5_N47189093850   
SAGE_Breast_Normal_Epithelium_CD44+_N7_N5811007864320   
SAGE_Embryo_Pre-Cancer_B_hs03246893016240   
SAGE_Embryonic_stem_cell_HSF6_normal_p50_CL_SHES922448810   
SAGE_Embryonic_stem_cell_normal_CL_hs02383636083140   
SAGE_Lymph_node_Lymphoma_B_hs0196479148170   
SAGE_Vein_normal_B_hs02376135688170