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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Digital Northern Results

Search query: TTTCTATGCT

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Tags per 200,000 <2 <4 <8 <16 <32 <64 <128 <256 <512 >512

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Tag CountsTags per
200,000
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Code
SAGE_Stomach_normal_B_antrum26653215   
SAGE_Brain_oligodendroglioma_B_100132442212   
SAGE_Pancreas_carcinoma_CL_ASPC31224212   
SAGE_Peritoneum_mesothelioma_B_1232529212   
SAGE_Lung_normal_B_188708511   
SAGE_Brain_medulloblastoma_B_97-05-P31274295410   
SAGE_Brain_medulloblastoma_CL_H3414392029   
SAGE_Prostate_carcinoma_CL_LNCaP-C4002929   
SAGE_Stomach_adenocarcinoma_B_G2346492539   
SAGE_Pancreas_adenocarcinoma_CL_Panc12474918   
SAGE_Stomach_normal_MD_13S4590828   
SAGE_Stomach_normal_epithelium_B_body12476118   
SAGE_White_Blood_Cells_monocytes_normal_AP_A29878648   
SAGE_Brain_ependymoma_B_13945631427   
SAGE_Peritoneum_normal_B_135352727   
SAGE_Spinal_cord_normal_B_15478527   
SAGE_White_Blood_Cells_monocyte_normal_AP_P110115847   
SAGE_Brain_medulloblastoma_B_98-04-P1173257016   
SAGE_Breast_phyllodes_tumor_fibroblasts_AP_0702025957526   
SAGE_Lymph_Node_normal_B_19942636   
SAGE_Ovary_adenocarcinoma_B_OVT-83198716   
SAGE_Ovary_carcinoma_CL_ES2-13115916   
SAGE_Bone_marrow_normal_B_D013657715   
SAGE_Brain_astrocytoma_grade_II_B_H12711448935   
SAGE_Brain_medulloblastoma_B_C6097461225   
SAGE_Breast_Carcinoma_SSEA4+_C7_IDC403381240975   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIEK03774715   
SAGE_Lung_adenocarcinoma_MD_L93591615   
SAGE_Lymph_node_Lymphoma_B_hs019647914811375   
SAGE_Pancreas_adenocarcinoma_CL_CAPAN13767415   
SAGE_Placenta_normal_B_111808335   
SAGE_Prostate_carcinoma_CL_PC3_Mock3881915   
SAGE_Stomach_normal_MD_14S7335325   
SAGE_Brain_Medulloblastoma_CL_UW228-N9493724   
SAGE_Brain_medulloblastoma_B_98-05-P6084845114   
SAGE_Brain_medulloblastoma_B_98-09-P5588598424   
SAGE_Breast_carcinoma_B_DCIS-54309814   
SAGE_Breast_carcinoma_CL_MDA435H484032314   
SAGE_Breast_normal_epithelium_CD24+_AP_N24155114   
SAGE_Colon_adenocarcinoma_B_Tu984137114   
SAGE_Leukocytes_normal_B_14787314   
SAGE_Lung_adenocarcinoma_MD_L108688724   
SAGE_Stomach_adenocarcinoma_MD_HG79371424   
SAGE_White_Blood_Cells_monocyte_normal_AP_A19991324   
SAGE_Brain_astrocytoma_grade_III_B_43910782423   
SAGE_Brain_astrocytoma_grade_III_B_H10205157313   
SAGE_Brain_ependymoma_B_R102312269023   
SAGE_Brain_ependymoma_B_R4555182513   
SAGE_Brain_glioblastoma_B_R2010105323   
SAGE_Brain_glioblastoma_CL_H3925599013   
SAGE_Brain_glioblastoma_CL_H54+EGFRvIII5698213   
SAGE_Brain_medulloblastoma_B_H14136185313   
SAGE_Brain_medulloblastoma_B_H3066045413   
SAGE_Brain_meningioma_grade_III_B_SF23665978613   
SAGE_Breast_carcinoma_B_IDC-46409513   
SAGE_Breast_carcinoma_B_IDC-56045113   
SAGE_Breast_carcinoma_CL_MCF7control_0h5987713   
SAGE_Breast_carcinoma_CL_MCF7estradiol_3h6016213   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC86652013   
SAGE_Breast_normal_myoepithelium_CL_HME505551613   
SAGE_Colon_adenocarcinoma_CL_Caco26068213   
SAGE_Liver_cholangiocarcinoma_CL_K45297313   
SAGE_Muscle_normal_B_old5388913   
SAGE_Retina_Peripheral_normal_B_15966113   
SAGE_Stomach_adenocarcinoma_MD_HS295883113   
SAGE_Stomach_carcinoma_B_G1896307513   
SAGE_Thyroid_follicular_carcinoma_B_TT00412466423   
SAGE_Universal_reference_human_RNA_CL5172913   
SAGE_Vascular_endothelium_normal_breast_associated_P1H12+_AP_15702313   
SAGE_Vascular_normal_CS_control5164213   
SAGE_White_Blood_Cells_monocyte_depleted_mononuclear_cells_normal_AP_P15163413   
SAGE_White_Blood_Cells_monocytes_normal_AP_C110165623   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P110287323   
SAGE_Bone_marrow_normal_AP_CD34+/CD38+/lin+8159512   
SAGE_Brain_Medulloblastoma_CL_425Otx2siRNA9729112   
SAGE_Brain_Medulloblastoma_CL_UW228-V28082712   
SAGE_Brain_astrocytoma_grade_I_B_H10437592212   
SAGE_Brain_ependymoma_B_R5108407312   
SAGE_Brain_ependymoma_B_R5127537912   
SAGE_Brain_glioblastoma_B_H11106898612   
SAGE_Brain_glioblastoma_B_H1425C8899012   
SAGE_Brain_glioblastoma_B_R709909912   
SAGE_Brain_glioblastoma_hypoxia_CL_H2477176512   
SAGE_Brain_medulloblastoma_B_DL76839212   
SAGE_Brain_medulloblastoma_B_H9728537612   
SAGE_Brain_normal_leptomeninges_B_AL27247312   
SAGE_Breast_carcinoma_MD_LCIS6783412   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC87396712   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIFK08594412   
SAGE_Esophagus_Adenocarcinoma_B_CA1D7379312   
SAGE_GallBladder_Adenocarcinoma_B_C018138012   
SAGE_Heart_normal_B_18306312   
SAGE_Lymph_node_Lymphoma_B_hs02045178993552   
SAGE_Retina_Retinoblastoma_B_18849012   
SAGE_Stomach_carcinoma_B_xenograft_X1016974912   
SAGE_Bladder_Cancer_B_hs02664244612251   
SAGE_Brain_astrocytoma_grade_III_B_40710831211   
SAGE_Brain_astrocytoma_grade_III_B_58410300811   
SAGE_Brain_astrocytoma_grade_III_B_H97010698211   
SAGE_Brain_astrocytoma_grade_III_B_R14011873311   
SAGE_Brain_astrocytoma_grade_II_B_H50112830911   
SAGE_Brain_fetal_normal_B_S130554621   
SAGE_Brain_glioblastoma_B_H135312480511   
SAGE_Brain_glioblastoma_B_H83310060011   
SAGE_Brain_glioblastoma_CL_4d11521211   
SAGE_Breast_Carcinoma_CD24+_C4_IDC403570910221   
SAGE_Embryonic_stem_cell_HES3_normal_p16_CL_SHE1020535321   
SAGE_Peripheral_Blood_Cancer_B_hs04295756848521   
SAGE_Peripheral_Blood_Cancer_B_hs04306399705551   
SAGE_Retina_Macula_normal_B_4Mac10141711   
SAGE_Retina_macula_normal_B_HMAC210241711   
SAGE_Skin_Cancer_B_hs02833692239231   
SAGE_Skin_Cancer_B_hs02843892507241   
SAGE_Thyroid_normal_B_00111593811   
SAGE_Bladder_Cancer_B_hs02406216426100   
SAGE_Bladder_Cancer_B_hs0241333580120   
SAGE_Bladder_Cancer_B_hs02645833968280   
SAGE_Bladder_Cancer_B_hs0265464019890   
SAGE_Bone_Marrow_Cancer_FS_hs0405490003770   
SAGE_Breast_Carcinoma_CD24+_C1_IDC31428660460   
SAGE_Breast_Carcinoma_CD24+_C2_IDC344720960150   
SAGE_Breast_Carcinoma_CD24+_C3_IDC384117410180   
SAGE_Breast_Carcinoma_EPCR+_C5_IDC27379656810   
SAGE_Breast_Carcinoma_EPCR+_C6_IDC314208755120   
SAGE_Breast_Normal_Epithelium_CD24+_N3_N47303600210   
SAGE_Breast_Normal_Epithelium_CD44+_N7_N5811007864350   
SAGE_Embryo_Pre-Cancer_B_hs0324689301650   
SAGE_Embryonic_stem_cell_H1_normal_p31_CL_SHE1727620310   
SAGE_Embryonic_stem_cell_H7_normal_p33_CL_SHE1327246510   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES240143210   
SAGE_Embryonic_stem_cell_HSF6_normal_p50_CL_SHES922448810   
SAGE_Eye_Retinoblastoma_B_hs038912434232310   
SAGE_Foreskin_normal_B_hs0305394035070   
SAGE_Skin_Cancer_B_hs02795703298260   
SAGE_Skin_Cancer_B_hs02803618498100   
SAGE_Skin_Melanoma_B_hs0273388177090   
SAGE_Skin_Melanoma_B_hs0274389521160   
SAGE_Skin_Melanoma_B_hs0275412822190   
SAGE_Skin_Melanoma_B_hs0276563180030   
SAGE_Skin_Normal_B_hs02715807686210   
SAGE_Skin_Normal_B_hs02724397550110   
SAGE_Skin_Normal_B_hs02775269789100   
SAGE_Skin_Normal_B_hs0278304222150   
SAGE_Skin_Normal_B_hs0281651708930   
SAGE_Testis_Embryonal_Carcinoma_CL_hs02135935490160   
SAGE_Urothelium_normal_B_hs0239311430750   
SAGE_Uterus_Normal_B_hs01946452623120   
SAGE_Uterus_normal_B_hs01953718463100   
SAGE_Vein_normal_B_hs0230675562250   
SAGE_Vein_normal_B_hs02376135688140