Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
SAGE Genie
  • Human SAGE Genie Tools
  • Downloads
  • Digital Karyotyping
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Digital Northern Results

Search query: TTGTGTGATG

Color Code                              
Tags per 200,000 <2 <4 <8 <16 <32 <64 <128 <256 <512 >512

LibraryTotal Tags
in Library
Tag CountsTags per
200,000
Color
Code
SAGE_Stomach_adenocarcinoma_B_G23464925515   
SAGE_Stomach_normal_B_antrum26653215   
SAGE_Lung_normal_CL_L1542226314   
SAGE_White_Blood_Cells_monocytes_normal_AP_A298786714   
SAGE_Brain_medulloblastoma_CL_H34143920313   
SAGE_Testis_Embyronal_Carcinoma_B_166352412   
SAGE_Lung_adenocarcinoma_MD_L935916211   
SAGE_Brain_medulloblastoma_B_127338614210   
SAGE_Esophagus_Normal_B_CN0175634410   
SAGE_Brain_glioblastoma_CL_stem_cells10841459   
SAGE_Breast_carcinoma_B_CT15_IDC2184019   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC76509139   
SAGE_Breast_normal_epithelium_CD24+_AP_N154143029   
SAGE_Eye_Retinoblastoma_B_hs0389124342325629   
SAGE_Pancreas_normal_B_12152019   
SAGE_Prostate_carcinoma_CL_LNCaP-T4354229   
SAGE_White_Blood_Cells_monocytes_normal_AP_C110165659   
SAGE_Brain_medulloblastoma_CL_mhh-14785828   
SAGE_Brain_normal_thalamus_B_12401518   
SAGE_Breast_carcinoma_B_IDC-36889138   
SAGE_Ovary_normal_CL_IOSE29EC-114715928   
SAGE_Brain_ependymoma_B_R5127537937   
SAGE_Breast_carcinoma_epithelium_CD44+_AP_PE25234227   
SAGE_Breast_carcinoma_epithelium_PROCR+_AP_IDC285278127   
SAGE_Breast_normal_epithelium_CD44+_AP_N25600827   
SAGE_Breast_normal_myoepithelium_CL_HME505551627   
SAGE_Stomach_carcinoma_B_xenograph_X435162027   
SAGE_Vascular_endothelium_hemangioma_B_1467568037   
SAGE_Vascular_normal_CS_control5164227   
SAGE_White_Blood_Cells_monocyte_depleted_mononuclear_cells_normal_AP_P15163427   
SAGE_Bone_Marrow_Cancer_FS_hs040549000371636   
SAGE_Brain_oligodendroglioma_B_10013244216   
SAGE_Breast_carcinoma_CL_MCF7estradiol_3h6016226   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N15722226   
SAGE_Lung_normal_CL_L162898316   
SAGE_Ovary_adenocarcinoma_B_OVT-83198716   
SAGE_Pancreas_adenocarcinoma_B_96-62523321316   
SAGE_Pancreas_carcinoma_CL_ASPC3122416   
SAGE_Stomach_carcinoma_B_G1896307526   
SAGE_Vascular_endothelium_breast_carcinoma_associated_P1H12+_AP_DCIS66531426   
SAGE_Vascular_normal_CS_VEGF+5731626   
SAGE_White_Blood_Cells_monocyte_normal_AP_A19991336   
SAGE_Brain_ependymoma_B_R3537382225   
SAGE_Brain_medulloblastoma_B_C6097461225   
SAGE_Brain_normal_peds_cortex_B_H15717755425   
SAGE_Breast_carcinoma_B_95-2593936415   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_IDC263936115   
SAGE_Breast_normal_epithelium_CD24+_AP_N57646925   
SAGE_Breast_normal_epithelium_MUC1+_AP_N57622725   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIEK03774715   
SAGE_Embryo_Pre-Cancer_B_hs032468930162005   
SAGE_Esophagus_Dysplasia_B_LGD017490425   
SAGE_Pancreas_adenocarcinoma_CL_CAPAN13767415   
SAGE_Prostate_carcinoma_CL_PC3_Mock3881915   
SAGE_Skin_Cancer_B_hs028336922391075   
SAGE_White_Blood_Cells_breast_carcinoma_associated_CD45+_AP_IDC73439915   
SAGE_White_Blood_Cells_monocyte_normal_AP_P110115835   
SAGE_Bone_Marrow_Normal_FS_hs040448425471064   
SAGE_Brain_Medulloblastoma_CL_425Otx2siRNA9729124   
SAGE_Brain_glioblastoma_CS_TA24667814   
SAGE_Brain_medulloblastoma_B_98-05-P6084845114   
SAGE_Breast_normal_epithelium_CD44+_AP_N58046424   
SAGE_Embryonic_stem_cell_H1_normal_p31_CL_SHE1727620364   
SAGE_Liver_cholangiocarcinoma_B_K2D4685314   
SAGE_Prostate_carcinoma_CL_LNCaP-C4002914   
SAGE_Prostate_carcinoma_CL_PC3_AS24076814   
SAGE_Skin_Cancer_B_hs02843892507834   
SAGE_Stomach_normal_MD_13S4590814   
SAGE_Testis_Embryonal_Carcinoma_CL_hs021359354901464   
SAGE_Bladder_Cancer_B_hs026458339681003   
SAGE_Brain_Medulloblastoma_CL_425C26264213   
SAGE_Brain_astrocytoma_grade_III_B_34310015823   
SAGE_Brain_astrocytoma_grade_III_B_40710831223   
SAGE_Brain_astrocytoma_grade_III_B_43910782423   
SAGE_Brain_astrocytoma_grade_III_B_58410300823   
SAGE_Brain_astrocytoma_grade_III_B_R14011873323   
SAGE_Brain_astrocytoma_grade_II_B_H35910576423   
SAGE_Brain_astrocytoma_grade_II_B_H51811602223   
SAGE_Brain_ependymoma_B_13945631413   
SAGE_Brain_ependymoma_B_R4555182513   
SAGE_Brain_glioblastoma_CL_28d11062423   
SAGE_Brain_glioblastoma_control_CL_H2476042813   
SAGE_Brain_medulloblastoma_B_96-04-P0195264513   
SAGE_Brain_medulloblastoma_B_H4845746913   
SAGE_Brain_normal_cerebellum_B_15038513   
SAGE_Breast_Carcinoma_EPCR+_C5_IDC273796568593   
SAGE_Breast_carcinoma_B_DCIS-46060513   
SAGE_Breast_carcinoma_B_IDC-46409513   
SAGE_Breast_carcinoma_B_IDC-56045113   
SAGE_Breast_carcinoma_associated_stroma_B_DCIS65704913   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC86652013   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_PE25013213   
SAGE_Breast_metastatic_carcinoma_B_LN26034313   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N156399413   
SAGE_Breast_phyllodes_tumor_fibroblasts_AP_0702025957513   
SAGE_Colon_adenocarcinoma_CL_Caco26068213   
SAGE_Colon_adenocarcinoma_CL_HCT1165564113   
SAGE_Colon_adenocarcinoma_CL_SW8376114813   
SAGE_Embryonic_stem_cell_H1_normal_p54_CL_SHE1621821443   
SAGE_Foreskin_normal_B_hs03053940350643   
SAGE_Liver_normal_B_16630813   
SAGE_Peripheral_Blood_Cancer_B_hs042957568481003   
SAGE_Placenta_normal_B_111808323   
SAGE_Prostate_normal_B_26405813   
SAGE_Prostate_normal_MD_PR3175927713   
SAGE_Skin_Melanoma_B_hs02754128221633   
SAGE_Skin_Normal_B_hs02724397550763   
SAGE_Skin_Normal_B_hs027752697891053   
SAGE_Skin_Normal_B_hs028165170891013   
SAGE_Skin_Normal_B_hs02824411636703   
SAGE_Uterus_normal_B_hs01953718463603   
SAGE_Vascular_endothelium_normal_breast_associated_P1H12+_AP_15702313   
SAGE_White_Blood_Cells_lung_macrophage_normal_AP_L15187213   
SAGE_Bladder_Cancer_B_hs02406216426752   
SAGE_Bladder_Cancer_B_hs02654640198512   
SAGE_Bladder_Cancer_B_hs02664244612442   
SAGE_Bone_marrow_normal_AP_CD34+/CD38-/lin-8639112   
SAGE_Brain_ependymoma_B_H5806861412   
SAGE_Brain_ependymoma_B_R5108407312   
SAGE_Brain_fetal_normal_B_S130554642   
SAGE_Brain_medulloblastoma_B_97-05-P0156997112   
SAGE_Brain_medulloblastoma_B_97-05-P3127429512   
SAGE_Brain_medulloblastoma_B_98-05-P0408925812   
SAGE_Brain_medulloblastoma_B_DL76839212   
SAGE_Brain_medulloblastoma_B_H2757231812   
SAGE_Brain_medulloblastoma_B_H8766740412   
SAGE_Brain_medulloblastoma_B_H9728537612   
SAGE_Brain_meningioma_grade_I_B_SF42716925312   
SAGE_Breast_Carcinoma_CD24+_C2_IDC344720960682   
SAGE_Breast_Normal_Epithelium_CD24+_N3_N473036002362   
SAGE_Breast_Normal_Epithelium_CD24+_N4_N481802274192   
SAGE_Breast_carcinoma_B_95-3476707012   
SAGE_Breast_carcinoma_MD_LCIS6783412   
SAGE_Breast_carcinoma_epithelium_X_MUC1+_AP7514712   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N57617312   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGX08843912   
SAGE_Colon_carcinoma_CL_Hct116_wildtype_p53_Anoxia7901512   
SAGE_Embryonic_stem_cell_BG01_normal_p20_CL_SHE1920166832   
SAGE_Embryonic_stem_cell_H14_normal_p22_CL_SHE1421217032   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES115173522   
SAGE_GallBladder_Adenocarcinoma_B_HAIIb6698812   
SAGE_GallBladder_Normal_B_HN8570612   
SAGE_Lung_adenocarcinoma_MD_L108688712   
SAGE_Lymph_Node_Lymphoma_B_17200812   
SAGE_Lymph_node_Lymphoma_B_hs02045178993732   
SAGE_Peripheral_Blood_Cancer_B_hs04306399705802   
SAGE_Prostate_normal_epithelium_CS_confluent7189712   
SAGE_Retina_Retinoblastoma_B_18849012   
SAGE_Skin_Cancer_B_hs02803618498392   
SAGE_Skin_Normal_B_hs02715807686592   
SAGE_Stomach_adenocarcinoma_MD_HG79371412   
SAGE_Uterus_Normal_B_hs01946452623922   
SAGE_Vein_normal_B_hs02306755622702   
SAGE_Bladder_Cancer_B_hs02413335801301   
SAGE_Brain_astrocytoma_grade_III_B_H105510988611   
SAGE_Brain_astrocytoma_grade_III_B_H97010698211   
SAGE_Brain_astrocytoma_grade_III_B_R92710734411   
SAGE_Brain_astrocytoma_grade_II_B_H51610811611   
SAGE_Brain_ependymoma_B_R102312269011   
SAGE_Brain_glioblastoma_B_R2010105311   
SAGE_Brain_glioblastoma_B_R33610232211   
SAGE_Brain_glioblastoma_CL_4d11521211   
SAGE_Breast_Normal_Epithelium_CD44+_N6_N48104876561   
SAGE_Breast_Normal_Epithelium_CD44+_N7_N58110078641101   
SAGE_Embryonic_stem_cell_H13_normal_p22_CL_SHE1522110121   
SAGE_Embryonic_stem_cell_H7_normal_p33_CL_SHE1327246521   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES240143241   
SAGE_Embryonic_stem_cell_HES3_normal_p16_CL_SHE1020535321   
SAGE_Embryonic_stem_cell_HES4_normal_p36_CL_SHE1120923221   
SAGE_Embryonic_stem_cell_HSF6_normal_p50_CL_SHES922448821   
SAGE_Embryonic_stem_cell_normal_CL_hs02383636083231   
SAGE_Retina_Peripheral_normal_B_4Peri12669111   
SAGE_Skin_Cancer_B_hs02795703298541   
SAGE_Skin_Melanoma_B_hs02743895211201   
SAGE_Skin_Normal_B_hs02783042221301   
SAGE_Testis_Embryonal_Carcinoma_CL_hs02126370161521   
SAGE_Thyroid_follicular_carcinoma_B_TT00412466411   
SAGE_Vein_normal_B_hs02376135688561   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P110287311   
SAGE_Breast_Carcinoma_CD24+_C1_IDC314286604170   
SAGE_Breast_Carcinoma_CD24+_C3_IDC384117410160   
SAGE_Breast_Carcinoma_CD24+_C4_IDC40357091020   
SAGE_Breast_Carcinoma_EPCR+_C6_IDC31420875520   
SAGE_Breast_Carcinoma_SSEA4+_C7_IDC40338124070   
SAGE_Breast_Normal_Epithelium_CD24+_N1_N339646880420   
SAGE_Breast_Normal_Epithelium_CD24+_N2_N3513584223240   
SAGE_Breast_Normal_Epithelium_CD44+_N5_N47189093880   
SAGE_Lymph_node_Lymphoma_B_hs0196479148190   
SAGE_Skin_Melanoma_B_hs02733881770120   
SAGE_Skin_Melanoma_B_hs0276563180090   
SAGE_Urothelium_normal_B_hs0239311430760