Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
SAGE Genie
  • Human SAGE Genie Tools
  • Downloads
  • Digital Karyotyping
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Digital Northern Results

Search query: TTACTTAATG

Color Code                              
Tags per 200,000 <2 <4 <8 <16 <32 <64 <128 <256 <512 >512

LibraryTotal Tags
in Library
Tag CountsTags per
200,000
Color
Code
SAGE_Ovary_carcinoma_CL_A278021369328   
SAGE_Kidney_embryonic_CL_293+beta-catenin23519325   
SAGE_Testis_Embryonal_Carcinoma_CL_hs0212637016170922   
SAGE_Testis_Embryonal_Carcinoma_CL_hs0213593549065822   
SAGE_Testis_Embyronal_Carcinoma_B_166352618   
SAGE_Brain_ependymoblastoma_B_81933975317   
SAGE_Eye_Retinoblastoma_B_hs038912434232109517   
SAGE_Kidney_embryonic_CL_293-control41955314   
SAGE_Breast_carcinoma_B_DCIS-543098313   
SAGE_Embryonic_stem_cell_H13_normal_p22_CL_SHE152211011311   
SAGE_Brain_glioblastoma_CL_28d110624610   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_IDC2639361210   
SAGE_Embryonic_stem_cell_H1_normal_p54_CL_SHE162182141110   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES24014322210   
SAGE_Brain_ependymoma_B_R5108407349   
SAGE_Brain_glioblastoma_control_CL_H2476042839   
SAGE_Breast_Carcinoma_EPCR+_C6_IDC3142087552089   
SAGE_Breast_carcinoma_B_CT15_IDC2184019   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N156399439   
SAGE_Embryonic_stem_cell_H14_normal_p22_CL_SHE14212170109   
SAGE_Pancreas_normal_B_12152019   
SAGE_Brain_ependymoma_B_H5806861438   
SAGE_Brain_glioblastoma_B_R709909948   
SAGE_Brain_medulloblastoma_B_H2757231838   
SAGE_Breast_Carcinoma_CD24+_C1_IDC3142866041908   
SAGE_Breast_normal_epithelium_MUC1+_AP_N157170438   
SAGE_Ovary_normal_CL_IOSE29EC-114715928   
SAGE_Brain_astrocytoma_grade_III_B_40710831247   
SAGE_Brain_astrocytoma_grade_III_B_H10205157327   
SAGE_Brain_glioblastoma_CL_H54+EGFRvIII5698227   
SAGE_Brain_oligodendroglioma_B_H9882786417   
SAGE_Breast_carcinoma_epithelium_X_MUC1+_AP7514737   
SAGE_Breast_normal_epithelium_CD44+_AP_N25600827   
SAGE_Breast_normal_myoepithelium_CL_HME505551627   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Anoxia7905337   
SAGE_Embryonic_stem_cell_H7_normal_p33_CL_SHE13272465107   
SAGE_Kidney_carcinoma_B_D210028147   
SAGE_Ovary_cystadenoma_CL_ML10-105514427   
SAGE_Spinal_cord_normal_B_15478527   
SAGE_Brain_astrocytoma_grade_III_B_H2729605936   
SAGE_Brain_glioblastoma_B_H1425C8899036   
SAGE_Brain_medulloblastoma_B_98-04-P1173257016   
SAGE_Brain_medulloblastoma_CL_D2836631626   
SAGE_Brain_oligodendroglioma_B_10013244216   
SAGE_Embryonic_stem_cell_BG01_normal_p20_CL_SHE1920166876   
SAGE_Embryonic_stem_cell_H1_normal_p31_CL_SHE1727620396   
SAGE_Embryonic_stem_cell_HES4_normal_p36_CL_SHE1120923276   
SAGE_Eye_lens_B_UIHI08589836   
SAGE_Ovary_adenocarcinoma_B_OVT-83198716   
SAGE_Retina_Retinoblastoma_B_18849036   
SAGE_Brain_astrocytoma_grade_III_B_R92710734435   
SAGE_Brain_astrocytoma_grade_II_B_H35910576435   
SAGE_Brain_glioblastoma_CL_4d11521235   
SAGE_Breast_carcinoma_associated_stroma_B_IDC76802425   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N57617325   
SAGE_Esophagus_Normal_B_CN017563425   
SAGE_Lymph_Node_Lymphoma_B_17200825   
SAGE_Pancreas_adenocarcinoma_B_91-161133358215   
SAGE_Pancreas_adenocarcinoma_CL_CAPAN13767415   
SAGE_Stomach_carcinoma_B_xenograft_X1016974925   
SAGE_Thyroid_follicular_adenoma_B_TT00510157835   
SAGE_White_Blood_Cells_monocytes_normal_AP_C110165635   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P110287335   
SAGE_Brain_Medulloblastoma_CL_425Otx2siRNA9729124   
SAGE_Brain_Medulloblastoma_CL_UW228-N9493724   
SAGE_Brain_Medulloblastoma_CL_UW228-V28082724   
SAGE_Brain_astrocytoma_grade_III_B_8289993924   
SAGE_Brain_ependymoma_B_2394665314   
SAGE_Brain_medulloblastoma_B_98-05-P6084845114   
SAGE_Breast_carcinoma_CL_MDA435H244663114   
SAGE_Colon_carcinoma_CL_Hct116_wildtype_p53_Normal_Oxygen8039824   
SAGE_Embryonic_stem_cell_HSF6_normal_p50_CL_SHES922448854   
SAGE_Prostate_carcinoma_CL_LNCaP-C4002914   
SAGE_Retina_Peripheral_normal_B_4Peri12669134   
SAGE_Rheumatoid_arthritis_synovial_fibroblast_CS4247214   
SAGE_Uterus_Normal_B_hs019464526231304   
SAGE_Uterus_normal_B_hs01953718463884   
SAGE_White_Blood_Cells_monocyte_normal_AP_A19991324   
SAGE_Brain_astrocytoma_grade_II_B_H12711448923   
SAGE_Brain_astrocytoma_grade_II_B_H38810628523   
SAGE_Brain_astrocytoma_grade_II_B_H50112830923   
SAGE_Brain_ependymoma_B_11506237313   
SAGE_Brain_ependymoma_B_R102312269023   
SAGE_Brain_ependymoma_B_R4555182513   
SAGE_Brain_ependymoma_B_R5825218913   
SAGE_Brain_medulloblastoma_B_H13225949813   
SAGE_Breast_Carcinoma_CD24+_C2_IDC344720960723   
SAGE_Breast_Normal_Epithelium_CD24+_N3_N473036002563   
SAGE_Breast_carcinoma_B_DCIS-46060513   
SAGE_Breast_carcinoma_B_IDC-56045113   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC96593513   
SAGE_Breast_carcinoma_epithelium_CD44+_AP_PE25234213   
SAGE_Breast_carcinoma_epithelium_PROCR+_AP_IDC285278113   
SAGE_Breast_fibroadenoma_MD5568813   
SAGE_Breast_normal_B_gestational hyperplasia16170413   
SAGE_Breast_normal_stroma_B_IDC85048513   
SAGE_Colon_adenocarcinoma_CL_Caco26068213   
SAGE_Embryonic_stem_cell_normal_CL_hs02383636083723   
SAGE_Liver_cholangiocarcinoma_CL_K45297313   
SAGE_Liver_normal_B_16630813   
SAGE_Peripheral_Blood_Cancer_B_hs04295756848903   
SAGE_Prostate_adenocarcinoma_MD_PR3176495113   
SAGE_Prostate_carcinoma_CL_LNCaP6025013   
SAGE_Prostate_normal_B_26405813   
SAGE_Stomach_carcinoma_B_xenograph_X435162013   
SAGE_Universal_reference_human_RNA_CL5172913   
SAGE_White_Blood_Cells_lung_macrophage_normal_AP_L15187213   
SAGE_White_Blood_Cells_monocyte_depleted_mononuclear_cells_normal_AP_A15379513   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P25029713   
SAGE_Bladder_Cancer_B_hs02645833968702   
SAGE_Bladder_Cancer_B_hs02654640198532   
SAGE_Bone_marrow_normal_AP_CD34+/CD38+/lin+8159512   
SAGE_Bone_marrow_normal_AP_CD34+/CD38-/lin-8639112   
SAGE_Brain_glioblastoma_hypoxia_CL_H2477176512   
SAGE_Brain_medulloblastoma_B_97-05-P3127429512   
SAGE_Brain_medulloblastoma_B_98-05-P0408925812   
SAGE_Brain_medulloblastoma_B_98-09-P5588598412   
SAGE_Brain_medulloblastoma_B_C6097461212   
SAGE_Brain_medulloblastoma_B_DL58367112   
SAGE_Brain_medulloblastoma_B_DL76839212   
SAGE_Brain_medulloblastoma_B_H8766740412   
SAGE_Brain_normal_cortex_B_BB5429423312   
SAGE_Breast_Normal_Epithelium_CD44+_N5_N471890938262   
SAGE_Breast_carcinoma_B_95-3476707012   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS78918412   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Normal_Oxygen7928412   
SAGE_Embryo_Pre-Cancer_B_hs03246893016842   
SAGE_Esophagus_Dysplasia_B_HGD027861112   
SAGE_Esophagus_Dysplasia_B_LGD017490412   
SAGE_GallBladder_Adenocarcinoma_B_C018138012   
SAGE_GallBladder_Adenocarcinoma_B_HAIIb6698812   
SAGE_GallBladder_Adenocarcinoma_B_NAM017854812   
SAGE_Heart_normal_B_18306312   
SAGE_Lung_normal_B_18870812   
SAGE_Lymph_Node_normal_B_19942612   
SAGE_Peripheral_Blood_Cancer_B_hs04306399705832   
SAGE_Retinal_Pigment_Epithelium_normal_B_4MacRPE7726212   
SAGE_Retinal_Pigment_Epithelium_normal_B_4PeriRPE9019912   
SAGE_Vein_normal_B_hs023067556221002   
SAGE_Bladder_Cancer_B_hs02406216426411   
SAGE_Bladder_Cancer_B_hs02413335801221   
SAGE_Bladder_Cancer_B_hs02664244612391   
SAGE_Brain_astrocytoma_grade_III_B_34310015811   
SAGE_Brain_astrocytoma_grade_III_B_58410300811   
SAGE_Brain_astrocytoma_grade_III_B_H97010698211   
SAGE_Brain_fetal_normal_B_S130554621   
SAGE_Brain_glioblastoma_B_R33610232211   
SAGE_Breast_Carcinoma_CD24+_C4_IDC403570910321   
SAGE_Breast_Carcinoma_EPCR+_C5_IDC273796568261   
SAGE_Breast_Normal_Epithelium_CD24+_N1_N339646880661   
SAGE_Breast_Normal_Epithelium_CD44+_N6_N48104876581   
SAGE_Breast_Normal_Epithelium_CD44+_N7_N58110078641091   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES115173511   
SAGE_Embryonic_stem_cell_HES3_normal_p16_CL_SHE1020535321   
SAGE_Foreskin_normal_B_hs03053940350281   
SAGE_Lymph_node_Lymphoma_B_hs01964791481381   
SAGE_Lymph_node_Lymphoma_B_hs02045178993511   
SAGE_Skin_Cancer_B_hs02803618498271   
SAGE_Skin_Cancer_B_hs02843892507331   
SAGE_Skin_Melanoma_B_hs02733881770221   
SAGE_Skin_Normal_B_hs02715807686431   
SAGE_Skin_Normal_B_hs02775269789491   
SAGE_Skin_Normal_B_hs02783042221251   
SAGE_Thyroid_follicular_carcinoma_B_TT00412466411   
SAGE_Thyroid_normal_B_00111593811   
SAGE_Vein_normal_B_hs02376135688561   
SAGE_Bone_Marrow_Cancer_FS_hs04054900037100   
SAGE_Bone_Marrow_Normal_FS_hs04044842547190   
SAGE_Breast_Carcinoma_CD24+_C3_IDC384117410100   
SAGE_Breast_Carcinoma_SSEA4+_C7_IDC403381240130   
SAGE_Breast_Normal_Epithelium_CD24+_N2_N3513584223310   
SAGE_Breast_Normal_Epithelium_CD24+_N4_N48180227480   
SAGE_Skin_Cancer_B_hs0279570329850   
SAGE_Skin_Cancer_B_hs0283369223920   
SAGE_Skin_Melanoma_B_hs0274389521140   
SAGE_Skin_Melanoma_B_hs02754128221140   
SAGE_Skin_Melanoma_B_hs02765631800220   
SAGE_Skin_Normal_B_hs02724397550210   
SAGE_Skin_Normal_B_hs02816517089230   
SAGE_Urothelium_normal_B_hs02393114307140