Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
SAGE Genie
  • Human SAGE Genie Tools
  • Downloads
  • Digital Karyotyping
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Digital Northern Results

Search query: TTAATAAATG

Color Code                              
Tags per 200,000 <2 <4 <8 <16 <32 <64 <128 <256 <512 >512

LibraryTotal Tags
in Library
Tag CountsTags per
200,000
Color
Code
SAGE_Brain_astrocytoma_grade_II_B_H5011283091523   
SAGE_Brain_ependymoma_B_H58068614823   
SAGE_Breast_normal_myoepithelium_CL_HME5055516621   
SAGE_Skin_Normal_B_hs0278304222132021   
SAGE_Retinal_Pigment_Epithelium_normal_B_4MacRPE77262820   
SAGE_Thyroid_follicular_carcinoma_B_TT0041246641320   
SAGE_Breast_normal_B_gestational hyperplasia161704619   
SAGE_Skin_Melanoma_B_hs0273388177036919   
SAGE_Brain_medulloblastoma_B_98-09-P55885984818   
SAGE_Brain_glioblastoma_B_H1425C88990817   
SAGE_Brain_medulloblastoma_B_98-05-P04089258817   
SAGE_Breast_carcinoma_MD_LCIS67834617   
SAGE_Retina_macula_normal_B_HMAC2102417917   
SAGE_Brain_ependymoma_B_R35373822616   
SAGE_Brain_medulloblastoma_B_C60974612616   
SAGE_Lymph_Node_normal_B_199426816   
SAGE_Brain_normal_peds_cortex_B_H157177554615   
SAGE_Breast_carcinoma_B_95-25939364315   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC765091515   
SAGE_Brain_glioblastoma_B_H111068986514   
SAGE_Breast_fibroadenoma_MD55688414   
SAGE_Foreskin_normal_B_hs0305394035028514   
SAGE_GallBladder_Normal_B_HN85706614   
SAGE_Brain_astrocytoma_grade_III_B_R927107344713   
SAGE_Brain_astrocytoma_grade_II_B_H127114489813   
SAGE_Brain_astrocytoma_grade_II_B_H530102439713   
SAGE_Brain_meningioma_grade_II_B_SF362244857313   
SAGE_Eye_Retinoblastoma_B_hs03891243423282513   
SAGE_Skin_Cancer_B_hs0280361849824513   
SAGE_Skin_Normal_B_hs0272439755029613   
SAGE_Skin_Normal_B_hs0277526978935113   
SAGE_Testis_Embryonal_Carcinoma_CL_hs0213593549039213   
SAGE_Brain_astrocytoma_grade_III_B_H27296059612   
SAGE_Brain_astrocytoma_grade_II_B_H518116022712   
SAGE_Brain_glioblastoma_B_R7099099612   
SAGE_Brain_medulloblastoma_B_98-05-P60848451312   
SAGE_Brain_medulloblastoma_CL_mhh-147858312   
SAGE_Breast_carcinoma_CL_MDA435H2446631312   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC963539412   
SAGE_Heart_normal_B_183063512   
SAGE_Kidney_Glomeruli_Normal_B_bjballer148905312   
SAGE_Skin_Cancer_B_hs0284389250723612   
SAGE_Skin_Melanoma_B_hs0275412822126212   
SAGE_Skin_Normal_B_hs0271580768636512   
SAGE_Urothelium_normal_B_hs0239311430719812   
SAGE_Brain_astrocytoma_grade_III_B_584103008611   
SAGE_Brain_astrocytoma_grade_III_B_H970106982611   
SAGE_Brain_astrocytoma_grade_II_B_H56388568511   
SAGE_Brain_medulloblastoma_B_96-04-P01952645311   
SAGE_Brain_medulloblastoma_B_DL768392411   
SAGE_GallBladder_Adenocarcinoma_B_HAIIb66988411   
SAGE_Lung_normal_B_188708511   
SAGE_Retina_Macula_normal_B_4Mac101417611   
SAGE_Retina_Peripheral_normal_B_2105312611   
SAGE_Retina_normal_B_4cRet103701611   
SAGE_Skin_Melanoma_B_hs0274389521123111   
SAGE_White_Blood_Cells_lung_macrophage_normal_AP_L151872311   
SAGE_Bladder_Cancer_B_hs0266424461222810   
SAGE_Bone_marrow_normal_B_D0136577210   
SAGE_Brain_glioblastoma_CL_4d115212610   
SAGE_Breast_carcinoma_associated_stroma_B_DCIS657049310   
SAGE_GallBladder_Adenocarcinoma_B_NAM0178548410   
SAGE_Lymph_node_Lymphoma_B_hs0204517899326210   
SAGE_Brain_astrocytoma_grade_III_B_34310015859   
SAGE_Brain_astrocytoma_grade_III_B_H105510988659   
SAGE_Brain_ependymoma_B_11506237339   
SAGE_Brain_glioblastoma_B_H135312480569   
SAGE_Brain_glioblastoma_B_R33610232259   
SAGE_Breast_carcinoma_B_CT15_IDC2184019   
SAGE_Breast_carcinoma_CL_MDA435H484032329   
SAGE_Breast_carcinoma_MD_DCIS4078329   
SAGE_Breast_normal_epithelium_CD24+_AP_N24155129   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES115173579   
SAGE_Kidney_normal_B_14099329   
SAGE_Ovary_adenocarcinoma_B_OVT-64144329   
SAGE_Prostate_carcinoma_CL_LNCaP-C4002929   
SAGE_Prostate_carcinoma_CL_LNCaP-T4354229   
SAGE_Stomach_carcinoma_B_G1896307539   
SAGE_Testis_Embyronal_Carcinoma_B_16635239   
SAGE_Uterus_Normal_B_hs019464526233229   
SAGE_Bladder_Cancer_B_hs026458339682418   
SAGE_Brain_astrocytoma_grade_III_B_R14011873358   
SAGE_Brain_medulloblastoma_B_H2757231838   
SAGE_Brain_meningioma_grade_II_B_SF21764871128   
SAGE_Breast_carcinoma_B_95-3476707038   
SAGE_Breast_carcinoma_B_IDC-36889138   
SAGE_Breast_carcinoma_CL_MDA435C4727028   
SAGE_Breast_carcinoma_associated_stroma_B_IDC76802438   
SAGE_Breast_metastatic_carcinoma_B_LN14508728   
SAGE_Liver_cholangiocarcinoma_B_K2D4685328   
SAGE_Retinal_Pigment_Epithelium_normal_B_4PeriRPE9019948   
SAGE_Skin_Cancer_B_hs028336922391668   
SAGE_Vein_normal_B_hs023761356882768   
SAGE_Bladder_Cancer_B_hs024133358011247   
SAGE_Bladder_Cancer_B_hs026546401981737   
SAGE_Brain_astrocyte_normal_CL_NHA55148127   
SAGE_Brain_astrocytoma_grade_III_B_40710831247   
SAGE_Brain_astrocytoma_grade_II_B_H35910576447   
SAGE_Brain_astrocytoma_grade_II_B_H38810628547   
SAGE_Breast_normal_epithelium_CD24+_AP_N57646937   
SAGE_Breast_normal_epithelium_CD44+_AP_N25600827   
SAGE_Breast_normal_stroma_AP_17915237   
SAGE_Embryonic_stem_cell_BG01_normal_p20_CL_SHE1920166887   
SAGE_Peripheral_Blood_Cancer_B_hs042957568482077   
SAGE_Testis_Embryonal_Carcinoma_CL_hs021263701612237   
SAGE_White_Blood_Cells_monocyte_depleted_mononuclear_cells_normal_AP_A15379527   
SAGE_White_Blood_Cells_monocytes_normal_AP_C110165647   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P25029727   
SAGE_Brain_medulloblastoma_B_H3066045426   
SAGE_Breast_carcinoma_B_IDC-56045126   
SAGE_Breast_carcinoma_CL_MCF7control_0h5987726   
SAGE_Breast_carcinoma_CL_MCF7estradiol_10H6072526   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC96593526   
SAGE_Breast_normal_organoid_B5818126   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES2401432146   
SAGE_Embryonic_stem_cell_normal_CL_hs023836360831246   
SAGE_Ovary_adenocarcinoma_B_OVT-83198716   
SAGE_Placenta_first_trimester_normal_B_18926536   
SAGE_Prostate_carcinoma_B_pool26603426   
SAGE_Prostate_normal_B_26405826   
SAGE_Skin_Normal_B_hs028165170892096   
SAGE_Vascular_normal_CS_VEGF+5731626   
SAGE_Vein_normal_B_hs023067556222276   
SAGE_White_Blood_Cells_monocyte_normal_AP_A19991336   
SAGE_White_Blood_Cells_normal_breast_associated_CD45+_AP3198516   
SAGE_Brain_astrocytoma_grade_II_B_H51610811635   
SAGE_Brain_glioblastoma_CL_28d11062435   
SAGE_Brain_medulloblastoma_B_97-05-P3127429525   
SAGE_Brain_medulloblastoma_B_H8766740425   
SAGE_Breast_Carcinoma_EPCR+_C5_IDC2737965681105   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC87396725   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGD010986235   
SAGE_Embryo_Pre-Cancer_B_hs032468930161975   
SAGE_Embryonic_stem_cell_H7_normal_p33_CL_SHE1327246575   
SAGE_Embryonic_stem_cell_HES4_normal_p36_CL_SHE1120923265   
SAGE_Lung_adenocarcinoma_MD_L93591615   
SAGE_Pancreas_adenocarcinoma_B_91-161133358215   
SAGE_Peripheral_Blood_Cancer_B_hs043063997051835   
SAGE_Placenta_normal_B_111808335   
SAGE_Prostate_carcinoma_CL_PC3_Mock3881915   
SAGE_Prostate_normal_epithelium_CS_senescent7171725   
SAGE_Thyroid_normal_B_00111593835   
SAGE_Bladder_Cancer_B_hs024062164261534   
SAGE_Bone_marrow_normal_AP_CD34+/CD38+/lin+8159524   
SAGE_Brain_ependymoma_B_2394665314   
SAGE_Brain_ependymoma_B_R5108407324   
SAGE_Brain_glioblastoma_B_H13714933814   
SAGE_Brain_glioblastoma_CS_TA24667814   
SAGE_Brain_medulloblastoma_B_98-04-P4944306814   
SAGE_Brain_medulloblastoma_B_H9728537624   
SAGE_Brain_normal_cerebellum_B_BB5424050014   
SAGE_Brain_normal_cortex_B_BB5429423324   
SAGE_Brain_normal_substantia_nigra_B_14177314   
SAGE_Breast_Carcinoma_CD24+_C2_IDC3447209601044   
SAGE_Breast_Carcinoma_SSEA4+_C7_IDC403381240734   
SAGE_Breast_normal_epithelium_BEREP4+_AP_N14872914   
SAGE_Colon_normal_B_NC14961014   
SAGE_Embryonic_stem_cell_H14_normal_p22_CL_SHE1421217054   
SAGE_Embryonic_stem_cell_H1_normal_p31_CL_SHE1727620364   
SAGE_GallBladder_Adenocarcinoma_B_C018138024   
SAGE_Kidney_embryonic_CL_293-control4195514   
SAGE_Lung_adenocarcinoma_MD_L108688724   
SAGE_Lung_normal_CL_L154222614   
SAGE_Ovary_normal_CS_HOSE_44772814   
SAGE_Prostate_carcinoma_CL_PC3_AS24076814   
SAGE_Retina_Retinoblastoma_B_18849024   
SAGE_Uterus_normal_B_hs01953718463894   
SAGE_Brain_Medulloblastoma_CL_425C26264213   
SAGE_Brain_ependymoma_B_13945631413   
SAGE_Brain_fetal_normal_B_S130554663   
SAGE_Brain_glioblastoma_control_CL_H2476042813   
SAGE_Brain_meningioma_grade_III_B_SF23665978613   
SAGE_Brain_normal_cerebellum_B_15038513   
SAGE_Breast_Carcinoma_EPCR+_C6_IDC314208755643   
SAGE_Breast_carcinoma_B_DCIS-46060513   
SAGE_Breast_carcinoma_CL_MCF7estradiol_3h6016213   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS-26616813   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC86652013   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_IDC285795613   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_PE25013213   
SAGE_Breast_metastatic_carcinoma_B_LN26034313   
SAGE_Breast_phyllodes_tumor_fibroblasts_AP_0702025957513   
SAGE_Colon_adenocarcinoma_B_Tu1025570013   
SAGE_Muscle_Rhabdomyosarcoma_B_16127013   
SAGE_Peritoneum_normal_B_135352713   
SAGE_Placenta_hydatidiform_mole_B_110167723   
SAGE_Prostate_adenocarcinoma_MD_PR3176495113   
SAGE_Retina_Peripheral_normal_B_15966113   
SAGE_Retina_Peripheral_normal_B_4Peri12669123   
SAGE_Retina_Pigment_epithelium_normal_B_15366613   
SAGE_Skin_Normal_B_hs02824411636813   
SAGE_Spinal_cord_normal_B_15478513   
SAGE_Stomach_adenocarcinoma_MD_HS295883113   
SAGE_Thyroid_follicular_adenoma_B_TT00510157823   
SAGE_Universal_reference_human_RNA_CL5172913   
SAGE_Vascular_normal_CS_control5164213   
SAGE_White_Blood_Cells_monocytes_normal_AP_P25442613   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P110287323   
SAGE_Brain_Medulloblastoma_CL_425Otx2siRNA9729112   
SAGE_Brain_Medulloblastoma_CL_UW228-N9493712   
SAGE_Brain_astrocytoma_grade_III_B_8289993912   
SAGE_Brain_glioblastoma_CL_H54+LacZ6690812   
SAGE_Brain_medulloblastoma_B_97-05-P0156997112   
SAGE_Brain_medulloblastoma_B_DL58367112   
SAGE_Brain_normal_leptomeninges_B_AL27247312   
SAGE_Breast_Carcinoma_CD24+_C1_IDC314286604472   
SAGE_Breast_Carcinoma_CD24+_C3_IDC384117410462   
SAGE_Breast_Normal_Epithelium_CD44+_N6_N481048765112   
SAGE_Breast_carcinoma_epithelium_BerEP4+AP_IDC77341012   
SAGE_Breast_carcinoma_epithelium_X_MUC1+_AP7514712   
SAGE_Breast_normal_epithelium_MUC1+_AP_N57622712   
SAGE_Breast_normal_myoepithelium_CD10+_AP_IDC76900612   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIFK08594412   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Normal_Oxygen7928412   
SAGE_Colon_carcinoma_CL_Hct116_wildtype_p53_Anoxia7901512   
SAGE_Embryonic_stem_cell_H1_normal_p54_CL_SHE1621821432   
SAGE_Embryonic_stem_cell_HSF6_normal_p50_CL_SHES922448832   
SAGE_Esophagus_Normal_B_CN017563412   
SAGE_Eye_lens_B_UIHI08589812   
SAGE_Prostate_normal_epithelium_CS_confluent7189712   
SAGE_Skin_Melanoma_B_hs02765631800602   
SAGE_Stomach_carcinoma_B_xenograft_X1016974912   
SAGE_Stomach_normal_MD_14S7335312   
SAGE_Vascular_endothelium_hemangioma_B_1467568012   
SAGE_White_Blood_Cells_monocytes_normal_AP_A29878612   
SAGE_Bone_Marrow_Normal_FS_hs04044842547331   
SAGE_Brain_astrocytoma_grade_III_B_43910782411   
SAGE_Brain_ependymoma_B_R102312269011   
SAGE_Brain_glioblastoma_B_H83310060011   
SAGE_Brain_glioblastoma_B_R2010105311   
SAGE_Breast_Carcinoma_CD24+_C4_IDC403570910301   
SAGE_Breast_Normal_Epithelium_CD24+_N3_N473036002161   
SAGE_Breast_Normal_Epithelium_CD44+_N5_N471890938161   
SAGE_Breast_Normal_Epithelium_CD44+_N7_N5811007864821   
SAGE_Embryonic_stem_cell_HES3_normal_p16_CL_SHE1020535321   
SAGE_Lymph_node_Lymphoma_B_hs01964791481311   
SAGE_Skin_Cancer_B_hs02795703298341   
SAGE_Bone_Marrow_Cancer_FS_hs0405490003750   
SAGE_Breast_Normal_Epithelium_CD24+_N1_N33964688070   
SAGE_Breast_Normal_Epithelium_CD24+_N2_N351358422340   
SAGE_Breast_Normal_Epithelium_CD24+_N4_N48180227430   
SAGE_Embryonic_stem_cell_H13_normal_p22_CL_SHE1522110110