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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


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SAGE_Brain_normal_peds_cortex_B_H15717755461157   
SAGE_Brain_medulloblastoma_B_H9728537650117   
SAGE_Brain_astrocytoma_grade_II_B_H1271144895087   
SAGE_Breast_carcinoma_B_IDC-5604512582   
SAGE_Retina_Peripheral_normal_B_21053124279   
SAGE_Thyroid_follicular_carcinoma_B_TT0041246644673   
SAGE_Breast_metastatic_carcinoma_B_LN2603432169   
SAGE_Heart_normal_B_1830632867   
SAGE_Retina_macula_normal_B_HMAC21024173466   
SAGE_Brain_medulloblastoma_B_98-04-P494430681465   
SAGE_Brain_glioblastoma_B_H13531248054064   
SAGE_Brain_oligodendroglioma_B_1001324421061   
SAGE_Brain_astrocytoma_grade_II_B_H5301024393160   
SAGE_Brain_normal_substantia_nigra_B_1417731257   
SAGE_Breast_carcinoma_CL_ZR75_1_untreated32303955   
SAGE_Spinal_cord_normal_B_1547851554   
SAGE_Brain_astrocytoma_grade_II_B_H5181160223153   
SAGE_Prostate_carcinoma_B_LN-122599653   
SAGE_Retina_normal_B_4cRet1037012752   
SAGE_Brain_glioblastoma_B_R201010532651   
SAGE_Breast_carcinoma_B_DCIS-5430981151   
SAGE_Muscle_normal_B_old538891451   
SAGE_Breast_carcinoma_B_IDC-3688911749   
SAGE_Retina_Macula_normal_B_4Mac1014172447   
SAGE_Breast_carcinoma_CL_ZR75_1_estrogen38797946   
SAGE_Ovary_normal_CS_HOSE_4477281146   
SAGE_Retina_Peripheral_normal_B_1596611446   
SAGE_Stomach_normal_MD_14S733531746   
SAGE_Brain_astrocytoma_grade_III_B_3431001582345   
SAGE_Breast_carcinoma_MD_DCIS40783944   
SAGE_GallBladder_Normal_B_HN857061944   
SAGE_Brain_medulloblastoma_B_DL7683921543   
SAGE_Breast_carcinoma_B_IDC-4640951443   
SAGE_Thyroid_normal_B_0011159382543   
SAGE_Breast_carcinoma_B_DCIS-4606051342   
SAGE_Breast_normal_organoid_B581811241   
SAGE_Brain_astrocytoma_grade_III_B_5841030082140   
SAGE_Brain_glioblastoma_B_GBM1062597621240   
SAGE_Brain_medulloblastoma_B_98-13-P30145342939   
SAGE_Brain_normal_cerebellum_B_BB54240500839   
SAGE_Brain_medulloblastoma_B_98-05-P040892581738   
SAGE_Brain_medulloblastoma_B_H275723181438   
SAGE_Retinal_Pigment_Epithelium_normal_B_4MacRPE772621538   
SAGE_Universal_reference_human_RNA_CL517291038   
SAGE_Stomach_normal_B_antrum26653537   
SAGE_Thyroid_follicular_adenoma_B_TT0051015781937   
SAGE_Brain_astrocytoma_grade_III_B_R1401187332135   
SAGE_Brain_astrocytoma_grade_II_B_H5161081161935   
SAGE_Brain_oligodendroglioma_B_H98827864535   
SAGE_Breast_carcinoma_B_95-25939364735   
SAGE_Breast_carcinoma_B_95-347670701235   
SAGE_Breast_carcinoma_epithelium_BerEP4+AP_IDC7734101335   
SAGE_Brain_astrocytoma_grade_II_B_H5011283092234   
SAGE_Brain_ependymoma_B_23946653834   
SAGE_Brain_medulloblastoma_B_97-05-P015699711234   
SAGE_Stomach_carcinoma_B_G189630751134   
SAGE_Stomach_carcinoma_B_xenograft_X101697491234   
SAGE_Brain_astrocytoma_grade_III_B_R9271073441833   
SAGE_Brain_medulloblastoma_CL_mhh-147858833   
SAGE_Muscle_normal_B_young53947933   
SAGE_Brain_ependymoma_B_H580686141132   
SAGE_Brain_glioblastoma_CL_28d1106241832   
SAGE_Brain_glioblastoma_CL_H54+EGFRvIII56982931   
SAGE_Brain_normal_cortex_B_BB542942331531   
SAGE_Retina_Retinoblastoma_B_1884901431   
SAGE_Brain_medulloblastoma_B_96-04-P01952645830   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS-2661681030   
SAGE_Prostate_normal_epithelium_CS_confluent718971130   
SAGE_Skin_Cancer_B_hs0279570329887730   
SAGE_Brain_glioblastoma_B_H8331006001529   
SAGE_Brain_glioblastoma_CS_TA246678729   
SAGE_Brain_astrocytoma_grade_III_B_828999391428   
SAGE_Brain_glioblastoma_B_pooled56428828   
SAGE_Brain_medulloblastoma_B_98-05-P60848451728   
SAGE_Breast_fibroadenoma_MD55688828   
SAGE_Breast_normal_myoepithelium_CL_HME5055516828   
SAGE_Brain_astrocytoma_grade_III_B_H272960591327   
SAGE_Brain_astrocytoma_grade_II_B_H563885681227   
SAGE_Brain_ependymoma_B_R45551825727   
SAGE_Brain_normal_cerebellum_B_150385727   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC8739671027   
SAGE_Pancreas_carcinoma_CL_PL4529557427   
SAGE_Prostate_normal_epithelium_CS_senescent717171027   
SAGE_Skin_Melanoma_B_hs0276563180077427   
SAGE_Brain_astrocytoma_grade_III_B_H9701069821426   
SAGE_Brain_glioblastoma_CL_H54+LacZ66908926   
SAGE_Brain_medulloblastoma_B_C609746121026   
SAGE_Brain_medulloblastoma_B_DL5836711126   
SAGE_Brain_medulloblastoma_B_H87667404926   
SAGE_Breast_metastatic_carcinoma_B_LN145087626   
SAGE_Lymph_Node_normal_B_1994261326   
SAGE_Brain_ependymoma_B_115062373825   
SAGE_Breast_carcinoma_CL_MDA435C47270625   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_IDC2639361525   
SAGE_Brain_meningioma_grade_II_B_SF217648711624   
SAGE_Breast_carcinoma_CL_MDA435H4840323524   
SAGE_Colon_normal_B_NC248479624   
SAGE_Liver_normal_B_166308824   
SAGE_Brain_astrocytoma_grade_III_B_H10551098861323   
SAGE_Brain_ependymoma_B_R510840731023   
SAGE_GallBladder_Adenocarcinoma_B_HAIIb66988823   
SAGE_Stomach_adenocarcinoma_MD_HS2958831723   
SAGE_Brain_medulloblastoma_B_H141361853722   
SAGE_Brain_meningioma_grade_II_B_SF362244857522   
SAGE_Lung_adenocarcinoma_B_136256422   
SAGE_Lung_normal_B_1887081022   
SAGE_Brain_ependymoma_B_139456314621   
SAGE_Brain_ependymoma_B_R10231226901321   
SAGE_Brain_glioblastoma_CL_H39255990621   
SAGE_Pancreas_adenocarcinoma_CL_CAPAN137674421   
SAGE_Brain_medulloblastoma_B_127338614420   
SAGE_Brain_medulloblastoma_B_H48457469620   
SAGE_Breast_carcinoma_associated_stroma_B_IDC768024720   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_IDC2857956620   
SAGE_GallBladder_Adenocarcinoma_B_NAM0178548820   
SAGE_Placenta_first_trimester_normal_B_189265920   
SAGE_Vascular_endothelium_normal_liver_associated_AP_NLEC177759820   
SAGE_Brain_ependymoma_B_R58252189519   
SAGE_Brain_glioblastoma_CL_4d1152121119   
SAGE_Brain_glioblastoma_hypoxia_CL_H24771765719   
SAGE_Lymph_node_Lymphoma_B_hs0204517899350019   
SAGE_Ovary_carcinoma_CL_ES2-131159319   
SAGE_Prostate_carcinoma_CL_PC3_AS240768419   
SAGE_Retinal_Pigment_Epithelium_normal_B_4PeriRPE90199919   
SAGE_Stomach_carcinoma_B_xenograph_X4351620519   
SAGE_Uterus_Normal_B_hs0194645262363719   
SAGE_Brain_astrocytoma_grade_II_B_H3591057641018   
SAGE_Brain_ependymoma_B_R6281204311118   
SAGE_Brain_medulloblastoma_B_98-09-P55885984818   
SAGE_Brain_meningioma_grade_I_B_SF446554647518   
SAGE_Liver_cholangiocarcinoma_CL_K354842518   
SAGE_Placenta_normal_B_11180831118   
SAGE_Uterus_endometrium_normal_CS_DI121991218   
SAGE_Vascular_endothelium_hemangioma_B_14675680718   
SAGE_Brain_Medulloblastoma_CL_UW228-V280827717   
SAGE_Brain_fetal_normal_B_S13055462717   
SAGE_Brain_glioblastoma_B_H111068986617   
SAGE_Brain_glioblastoma_B_H1425C88990817   
SAGE_Kidney_embryonic_CL_293+beta-catenin23519217   
SAGE_Retina_Peripheral_normal_B_4Peri1266911117   
SAGE_White_Blood_Cells_breast_carcinoma_associated_CD45+_AP_IDC734399317   
SAGE_Brain_glioblastoma_B_H137149338416   
SAGE_Brain_normal_cortex_B_pool662451516   
SAGE_Brain_normal_thalamus_B_124015216   
SAGE_Lung_adenocarcinoma_MD_L935916316   
SAGE_Stomach_normal_epithelium_B_body124761216   
SAGE_Brain_astrocytoma_grade_II_B_H388106285815   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC963539515   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS789184715   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC866520515   
SAGE_Breast_normal_epithelium_BEREP4+_AP_N250512415   
SAGE_Prostate_adenocarcinoma_MD_PR31764951515   
SAGE_Prostate_normal_B_264058515   
SAGE_Brain_astrocytoma_grade_III_B_439107824814   
SAGE_Brain_glioblastoma_B_R7099099714   
SAGE_Breast_carcinoma_CL_ZR75_1_tamoxifen40052314   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES11517351114   
SAGE_Ovary_cystadenoma_CL_ML10-1055144414   
SAGE_Rheumatoid_arthritis_synovial_fibroblast_CS42472314   
SAGE_Bladder_Cancer_B_hs0264583396839413   
SAGE_Bladder_Cancer_B_hs0266424461229413   
SAGE_Brain_glioblastoma_control_CL_H24760428413   
SAGE_Brain_normal_leptomeninges_B_AL272473513   
SAGE_Colon_adenocarcinoma_CL_SW83761148413   
SAGE_Embryonic_stem_cell_H1_normal_p31_CL_SHE172762031913   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES24014322813   
SAGE_Lymph_node_Lymphoma_B_hs0196479148133413   
SAGE_Prostate_carcinoma_CL_A+30298213   
SAGE_Prostate_carcinoma_CL_LNCaP60250413   
SAGE_Brain_Medulloblastoma_CL_425C262642412   
SAGE_Brain_medulloblastoma_CL_4-HCR66599412   
SAGE_Breast_Carcinoma_CD24+_C3_IDC38411741026012   
SAGE_Breast_carcinoma_CL_MDA435H2446631312   
SAGE_Breast_carcinoma_metastasis_B_249794312   
SAGE_Breast_normal_stroma_AP_179152512   
SAGE_Ovary_adenocarcinoma_B_OVT-831987212   
SAGE_Pancreas_normal_CS_H12632223212   
SAGE_Prostate_carcinoma_B_pool266034412   
SAGE_Stomach_adenocarcinoma_MD_G32946802312   
SAGE_Testis_Embryonal_Carcinoma_CL_hs0213593549036612   
SAGE_White_Blood_Cells_normal_breast_associated_CD45+_AP31985212   
SAGE_Brain_ependymoblastoma_B_81933975211   
SAGE_Brain_meningioma_grade_I_B_SF427169253411   
SAGE_Breast_Carcinoma_CD24+_C2_IDC34472096027211   
SAGE_Breast_carcinoma_MD_LCIS67834411   
SAGE_Colon_adenocarcinoma_CL_RKO51294311   
SAGE_Embryonic_stem_cell_H14_normal_p22_CL_SHE142121701211   
SAGE_Embryonic_stem_cell_HES3_normal_p16_CL_SHE102053531211   
SAGE_Liver_cholangiocarcinoma_CL_K452973311   
SAGE_Brain_astrocytoma_grade_I_B_H104375922410   
SAGE_Brain_ependymoma_B_R51275379410   
SAGE_Breast_Normal_Epithelium_CD24+_N4_N4818022749110   
SAGE_Breast_carcinoma_associated_stroma_B_DCIS657049310   
SAGE_Breast_phyllodes_tumor_fibroblasts_AP_07020259575310   
SAGE_Cartilage_chondrosarcoma_grade_2_CL_UIFU075019410   
SAGE_Prostate_carcinoma_CL_PC3_Mock38819210   
SAGE_Prostate_normal_MD_PR31759277310   
SAGE_Skin_Normal_B_hs0272439755022710   
SAGE_Skin_normal_B_NS36615210   
SAGE_Brain_glioblastoma_CL_stem_cells10841459   
SAGE_Brain_medulloblastoma_CL_H3414392029   
SAGE_Breast_carcinoma_B_CT15_IDC2184019   
SAGE_Breast_carcinoma_CL_MCF7estradiol_3h6016239   
SAGE_Breast_normal_epithelium_CD24+_AP_N24155129   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGP010831959   
SAGE_Kidney_normal_B_14099329   
SAGE_Muscle_Rhabdomyosarcoma_B_16127039   
SAGE_Prostate_carcinoma_CL_LNCaP_no-DHT6216039   
SAGE_Skin_Melanoma_B_hs027541282211999   
SAGE_Skin_melanoma_B_DB24133829   
SAGE_Stomach_adenocarcinoma_B_G2346492539   
SAGE_Testis_Embryonal_Carcinoma_CL_hs021263701612949   
SAGE_Testis_Embyronal_Carcinoma_B_16635239   
SAGE_Uterus_normal_B_hs019537184631759   
SAGE_Brain_ependymoma_B_R3537382238   
SAGE_Brain_medulloblastoma_B_97-05-P3127429538   
SAGE_Breast_Carcinoma_CD24+_C4_IDC4035709101578   
SAGE_Breast_Normal_Epithelium_CD24+_N2_N35135842235828   
SAGE_Breast_normal_epithelium_BEREP4+_AP_N14872928   
SAGE_Embryonic_stem_cell_HSF6_normal_p50_CL_SHES922448898   
SAGE_Esophagus_Dysplasia_B_LGD017490438   
SAGE_Kidney_Glomeruli_Normal_B_bjballer14890528   
SAGE_Leukocytes_normal_B_14787328   
SAGE_Liver_cholangiocarcinoma_B_K2D4685328   
SAGE_Lymph_Node_Lymphoma_B_17200838   
SAGE_Ovary_normal_CL_IOSE29EC-114715928   
SAGE_Pancreas_adenocarcinoma_CL_Panc12474918   
SAGE_Brain_astrocyte_normal_CL_NHA55148127   
SAGE_Breast_carcinoma_epithelium_PROCR+_AP_IDC295408027   
SAGE_Breast_normal_epithelium_MUC1+_AP_N57622737   
SAGE_Colon_adenocarcinoma_CL_HCT1165564127   
SAGE_Eye_Retinoblastoma_B_hs0389124342324677   
SAGE_Vein_normal_B_hs023761356882287   
SAGE_White_Blood_Cells_lung_macrophage_normal_AP_L15187227   
SAGE_Bladder_Cancer_B_hs024133358011146   
SAGE_Brain_medulloblastoma_B_H3066045426   
SAGE_Brain_medulloblastoma_CL_D2836631626   
SAGE_Brain_meningioma_grade_III_B_SF23665978626   
SAGE_Breast_carcinoma_CL_MCF7estradiol_10H6072526   
SAGE_Breast_normal_B_gestational hyperplasia16170426   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N156399426   
SAGE_Eye_lens_B_UIHI08589836   
SAGE_Pancreas_normal_CS_HX3198516   
SAGE_Peripheral_Blood_Cancer_B_hs042957568482016   
SAGE_Peripheral_Blood_Cancer_B_hs043063997052086   
SAGE_Stomach_adenocarcinoma_MD_HG79371436   
SAGE_Vascular_endothelium_breast_carcinoma_associated_P1H12+_AP_DCIS66531426   
SAGE_Vascular_normal_CS_VEGF+5731626   
SAGE_Bladder_Cancer_B_hs024062164261605   
SAGE_Bladder_Cancer_B_hs026546401981215   
SAGE_Bone_marrow_normal_B_D013657715   
SAGE_Brain_glioblastoma_B_R33610232235   
SAGE_Breast_Normal_Epithelium_CD24+_N1_N3396468802625   
SAGE_Breast_carcinoma_epithelium_X_MUC1+_AP7514725   
SAGE_Breast_carcinoma_myoepithelium_X_ITGB6+_AP7878525   
SAGE_Breast_normal_FS_NER3456515   
SAGE_Breast_normal_epithelium_CD24+_AP_N57646925   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N57617325   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGD010986235   
SAGE_Embryonic_stem_cell_H1_normal_p54_CL_SHE1621821465   
SAGE_Embryonic_stem_cell_HES4_normal_p36_CL_SHE1120923265   
SAGE_Esophagus_Adenocarcinoma_B_CA1D7379325   
SAGE_Foreskin_normal_B_hs030539403501155   
SAGE_Skin_Normal_B_hs027158076861585   
SAGE_Bone_marrow_normal_AP_CD34+/CD38+/lin+8159524   
SAGE_Brain_Medulloblastoma_CL_425Otx2siRNA9729124   
SAGE_Brain_Medulloblastoma_CL_UW228-N9493724   
SAGE_Breast_Carcinoma_SSEA4+_C7_IDC403381240744   
SAGE_Breast_Normal_Epithelium_CD24+_N3_N473036002664   
SAGE_Breast_carcinoma_associated_myoepithelium_CD10+_AP_DCIS68145224   
SAGE_Colon_carcinoma_CL_Hct116_wildtype_p53_Normal_Oxygen8039824   
SAGE_Embryonic_stem_cell_BG01_normal_p20_CL_SHE1920166854   
SAGE_Embryonic_stem_cell_H7_normal_p33_CL_SHE1327246564   
SAGE_GallBladder_Adenocarcinoma_B_C018138024   
SAGE_Kidney_embryonic_CL_293-control4195514   
SAGE_Lung_adenocarcinoma_MD_L108688724   
SAGE_Lung_normal_CL_L154222614   
SAGE_Ovary_adenocarcinoma_B_OVT-64144314   
SAGE_Prostate_carcinoma_CL_LNCaP-C4002914   
SAGE_Skin_Cancer_B_hs02803618498834   
SAGE_Skin_Normal_B_hs027752697891074   
SAGE_Skin_Normal_B_hs028165170891564   
SAGE_Stomach_normal_MD_13S4590814   
SAGE_White_Blood_Cells_monocyte_normal_AP_A19991324   
SAGE_Bone_Marrow_AML_FS_CD34+CD38+6151913   
SAGE_Brain_astrocytoma_grade_III_B_40710831223   
SAGE_Brain_astrocytoma_grade_III_B_H10205157313   
SAGE_Brain_medulloblastoma_B_H13225949813   
SAGE_Breast_Normal_Epithelium_CD44+_N7_N58110078641913   
SAGE_Breast_carcinoma_B_BWHT18_DCIS5070113   
SAGE_Breast_carcinoma_associated_myoepithelium_CD10+_AP_DCIS75199313   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS-35740213   
SAGE_Breast_carcinoma_epithelium_PROCR+_AP_IDC285278113   
SAGE_Breast_normal_epithelium_CD44+_AP_N25600813   
SAGE_Colon_adenocarcinoma_CL_Caco26068213   
SAGE_Ovary_adenocarcinoma_B_OVT-75351413   
SAGE_Peritoneum_normal_B_135352713   
SAGE_Skin_Cancer_B_hs02833692239683   
SAGE_Skin_Cancer_B_hs02843892507703   
SAGE_Skin_Melanoma_B_hs02743895211623   
SAGE_Skin_Normal_B_hs02783042221503   
SAGE_Skin_Normal_B_hs02824411636783   
SAGE_Urothelium_normal_B_hs02393114307533   
SAGE_Vascular_normal_CS_control5164213   
SAGE_Vein_normal_B_hs023067556221153   
SAGE_White_Blood_Cells_monocyte_depleted_mononuclear_cells_normal_AP_P15163413   
SAGE_White_Blood_Cells_monocyte_normal_AP_P110115823   
SAGE_White_Blood_Cells_monocytes_normal_AP_C110165623   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P110287323   
SAGE_Breast_Normal_Epithelium_CD44+_N6_N481048765112   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS67285712   
SAGE_Breast_normal_epithelium_CD44+_AP_N58046412   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Anoxia7905312   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Normal_Oxygen7928412   
SAGE_Embryo_Pre-Cancer_B_hs03246893016992   
SAGE_Esophagus_Dysplasia_B_HGD027861112   
SAGE_Lung_tumor_associated_chronic_inflammation_B_UIHM09896212   
SAGE_Ovary_endometriosis_CL_E127609712   
SAGE_Skin_Melanoma_B_hs02733881770482   
SAGE_White_Blood_Cells_monocytes_normal_AP_A29878612   
SAGE_Breast_Carcinoma_CD24+_C1_IDC314286604411   
SAGE_Breast_Carcinoma_EPCR+_C5_IDC273796568361   
SAGE_Breast_Carcinoma_EPCR+_C6_IDC314208755411   
SAGE_Breast_Normal_Epithelium_CD44+_N5_N471890938161   
SAGE_Placenta_hydatidiform_mole_B_110167711   
SAGE_Bone_Marrow_Cancer_FS_hs0405490003730   
SAGE_Bone_Marrow_Normal_FS_hs04044842547210   
SAGE_Embryonic_stem_cell_H13_normal_p22_CL_SHE1522110110   
SAGE_Embryonic_stem_cell_normal_CL_hs02383636083180