Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
SAGE Genie
  • Human SAGE Genie Tools
  • Downloads
  • Digital Karyotyping
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Digital Northern Results

Search query: TGTGAAATGG

Color Code                              
Tags per 200,000 <2 <4 <8 <16 <32 <64 <128 <256 <512 >512

LibraryTotal Tags
in Library
Tag CountsTags per
200,000
Color
Code
SAGE_Ovary_carcinoma_CL_ES2-131159319   
SAGE_Pancreas_adenocarcinoma_B_96-625233213318   
SAGE_Pancreas_adenocarcinoma_CL_CAPAN137674315   
SAGE_Brain_meningioma_grade_II_B_SF362244857313   
SAGE_Prostate_carcinoma_CL_A+30298213   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES24014322612   
SAGE_Ovary_normal_CL_IOSE29EC-1147159312   
SAGE_Breast_carcinoma_epithelium_PROCR+_AP_IDC2852781311   
SAGE_Brain_glioblastoma_CL_H39255990310   
SAGE_Brain_medulloblastoma_B_H132259498310   
SAGE_Brain_normal_cortex_B_BB54294233510   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIEK037747210   
SAGE_Embryonic_stem_cell_H13_normal_p22_CL_SHE15221101119   
SAGE_Fibroblasts_CL_postcrisis2183319   
SAGE_Prostate_normal_B_26405839   
SAGE_Brain_normal_thalamus_B_12401518   
SAGE_Embryonic_stem_cell_H14_normal_p22_CL_SHE1421217098   
SAGE_Liver_cholangiocarcinoma_B_K2D4685328   
SAGE_Placenta_first_trimester_normal_B_18926548   
SAGE_Stomach_normal_MD_14S7335338   
SAGE_Brain_normal_cerebellum_B_15038527   
SAGE_Brain_oligodendroglioma_B_H9882786417   
SAGE_Colon_adenocarcinoma_CL_HCT1165564127   
SAGE_Embryonic_stem_cell_H7_normal_p33_CL_SHE13272465107   
SAGE_Ovary_adenocarcinoma_B_OVT-75351427   
SAGE_Ovary_cystadenoma_CL_ML10-105514427   
SAGE_Peritoneum_normal_B_135352727   
SAGE_Placenta_hydatidiform_mole_B_110167747   
SAGE_Retina_Pigment_epithelium_normal_B_15366627   
SAGE_Spinal_cord_normal_B_15478527   
SAGE_Brain_Medulloblastoma_CL_UW228-N9493736   
SAGE_Brain_astrocytoma_grade_III_B_8289993936   
SAGE_Brain_meningioma_grade_III_B_SF23665978626   
SAGE_Breast_carcinoma_CL_MCF7estradiol_3h6016226   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC96353926   
SAGE_Cartilage_chondrosarcoma_grade_1_CL_UIIC03308116   
SAGE_Colon_adenocarcinoma_CL_SW8376114826   
SAGE_Embryo_Pre-Cancer_B_hs032468930162286   
SAGE_Embryonic_stem_cell_HES3_normal_p16_CL_SHE1020535376   
SAGE_Ovary_adenocarcinoma_B_OVT-83198716   
SAGE_Prostate_carcinoma_CL_LNCaP6025026   
SAGE_Brain_astrocytoma_grade_II_B_H35910576435   
SAGE_Brain_astrocytoma_grade_II_B_H53010243935   
SAGE_Brain_astrocytoma_grade_I_B_H10437592225   
SAGE_Brain_glioblastoma_B_R2010105335   
SAGE_Brain_glioblastoma_B_R33610232235   
SAGE_Brain_glioblastoma_CL_H54+LacZ6690825   
SAGE_Brain_medulloblastoma_B_H2757231825   
SAGE_Lung_adenocarcinoma_MD_L93591615   
SAGE_Lymph_Node_Lymphoma_B_17200825   
SAGE_Placenta_normal_B_111808335   
SAGE_Prostate_carcinoma_CL_PC3_Mock3881915   
SAGE_Stomach_carcinoma_B_xenograft_X1016974925   
SAGE_Testis_Embryonal_Carcinoma_CL_hs021359354901585   
SAGE_Breast_Normal_Epithelium_CD44+_N5_N471890938424   
SAGE_Breast_carcinoma_B_DCIS-54309814   
SAGE_Breast_carcinoma_CL_MDA435H244663114   
SAGE_Colon_adenocarcinoma_B_Tu984137114   
SAGE_Colon_carcinoma_CL_Hct116_wildtype_p53_Normal_Oxygen8039824   
SAGE_Embryonic_stem_cell_H1_normal_p31_CL_SHE1727620364   
SAGE_Embryonic_stem_cell_HES4_normal_p36_CL_SHE1120923254   
SAGE_Kidney_embryonic_CL_293-control4195514   
SAGE_Prostate_carcinoma_CL_LNCaP-C4002914   
SAGE_Prostate_carcinoma_CL_LNCaP-T4354214   
SAGE_Prostate_carcinoma_CL_PC3_AS24076814   
SAGE_Skin_melanoma_B_DB24133814   
SAGE_Bone_Marrow_AML_FS_CD34+CD38+6151913   
SAGE_Brain_astrocyte_normal_CL_NHA55148113   
SAGE_Brain_astrocytoma_grade_II_B_H38810628523   
SAGE_Brain_astrocytoma_grade_II_B_H51610811623   
SAGE_Brain_ependymoma_B_13945631413   
SAGE_Brain_ependymoma_B_R4555182513   
SAGE_Brain_ependymoma_B_R62812043123   
SAGE_Brain_glioblastoma_B_H135312480523   
SAGE_Brain_glioblastoma_B_pooled5642813   
SAGE_Brain_glioblastoma_CL_28d11062423   
SAGE_Brain_glioblastoma_CL_4d11521223   
SAGE_Brain_glioblastoma_CL_H54+EGFRvIII5698213   
SAGE_Brain_glioblastoma_control_CL_H2476042813   
SAGE_Brain_medulloblastoma_B_H4845746913   
SAGE_Brain_medulloblastoma_CL_D2836631613   
SAGE_Brain_normal_cortex_B_pool66245113   
SAGE_Breast_Carcinoma_CD24+_C1_IDC314286604713   
SAGE_Breast_Carcinoma_EPCR+_C6_IDC314208755713   
SAGE_Breast_Normal_Epithelium_CD24+_N3_N473036002523   
SAGE_Breast_Normal_Epithelium_CD44+_N6_N481048765173   
SAGE_Breast_carcinoma_B_IDC-46409513   
SAGE_Breast_carcinoma_associated_myoepithelium_CD10+_AP_DCIS75199313   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC96593513   
SAGE_Breast_fibroadenoma_MD5568813   
SAGE_Breast_normal_epithelium_BEREP4+_AP_N25051213   
SAGE_Breast_normal_epithelium_CD44+_AP_N25600813   
SAGE_Colon_adenocarcinoma_B_Tu1025570013   
SAGE_Colon_adenocarcinoma_CL_Caco26068213   
SAGE_Eye_Retinoblastoma_B_hs0389124342321893   
SAGE_Muscle_Rhabdomyosarcoma_B_16127013   
SAGE_Prostate_carcinoma_B_pool26603413   
SAGE_Retina_Peripheral_normal_B_15966113   
SAGE_Skin_Cancer_B_hs02803618498653   
SAGE_Skin_Cancer_B_hs02833692239733   
SAGE_Skin_Cancer_B_hs02843892507603   
SAGE_Skin_Normal_B_hs028165170891083   
SAGE_Stomach_adenocarcinoma_B_G2346492513   
SAGE_Stomach_carcinoma_B_G1896307513   
SAGE_Thyroid_follicular_carcinoma_B_TT00412466423   
SAGE_Vascular_endothelium_breast_carcinoma_associated_P1H12+_AP_DCIS66531413   
SAGE_White_Blood_Cells_breast_carcinoma_associated_CD45+_AP_DCIS66617613   
SAGE_White_Blood_Cells_monocyte_depleted_mononuclear_cells_normal_AP_A15379513   
SAGE_White_Blood_Cells_monocytes_normal_AP_C110165623   
SAGE_Bladder_Cancer_B_hs02406216426632   
SAGE_Brain_Medulloblastoma_CL_425Otx2siRNA9729112   
SAGE_Brain_Medulloblastoma_CL_UW228-V28082712   
SAGE_Brain_astrocytoma_grade_II_B_H5638856812   
SAGE_Brain_ependymoma_B_R3537382212   
SAGE_Brain_ependymoma_B_R5108407312   
SAGE_Brain_ependymoma_B_R5127537912   
SAGE_Brain_glioblastoma_B_R709909912   
SAGE_Brain_medulloblastoma_B_97-05-P0156997112   
SAGE_Brain_medulloblastoma_B_98-05-P0408925812   
SAGE_Brain_medulloblastoma_B_C6097461212   
SAGE_Brain_meningioma_grade_I_B_SF42716925312   
SAGE_Brain_normal_leptomeninges_B_AL27247312   
SAGE_Brain_normal_peds_cortex_B_H15717755412   
SAGE_Breast_Carcinoma_EPCR+_C5_IDC273796568412   
SAGE_Breast_Carcinoma_SSEA4+_C7_IDC403381240372   
SAGE_Breast_Normal_Epithelium_CD24+_N2_N35135842231772   
SAGE_Breast_carcinoma_associated_myoepithelium_CD10+_AP_DCIS68145212   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS78918412   
SAGE_Breast_carcinoma_myoepithelium_X_ITGB6+_AP7878512   
SAGE_Breast_normal_epithelium_MUC1+_AP_N157170412   
SAGE_Breast_normal_epithelium_MUC1+_AP_N57622712   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N57617312   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Normal_Oxygen7928412   
SAGE_Colon_carcinoma_CL_Hct116_wildtype_p53_Anoxia7901512   
SAGE_Embryonic_stem_cell_H1_normal_p54_CL_SHE1621821432   
SAGE_Embryonic_stem_cell_HSF6_normal_p50_CL_SHES922448832   
SAGE_Esophagus_Dysplasia_B_LGD017490412   
SAGE_GallBladder_Adenocarcinoma_B_C018138012   
SAGE_GallBladder_Adenocarcinoma_B_NAM017854812   
SAGE_Lung_adenocarcinoma_MD_L108688712   
SAGE_Lung_normal_B_18870812   
SAGE_Lung_tumor_associated_chronic_inflammation_B_UIHM09896212   
SAGE_Lymph_Node_normal_B_19942612   
SAGE_Peripheral_Blood_Cancer_B_hs04295756848642   
SAGE_Peripheral_Blood_Cancer_B_hs04306399705672   
SAGE_Prostate_normal_epithelium_CS_senescent7171712   
SAGE_Skin_Cancer_B_hs02795703298582   
SAGE_Stomach_adenocarcinoma_MD_HG79371412   
SAGE_Testis_Embryonal_Carcinoma_CL_hs02126370161942   
SAGE_Uterus_Normal_B_hs01946452623852   
SAGE_Uterus_normal_B_hs01953718463392   
SAGE_Vascular_endothelium_hemangioma_B_1467568012   
SAGE_Vascular_endothelium_normal_liver_associated_AP_NLEC17775912   
SAGE_Vein_normal_B_hs02306755622792   
SAGE_White_Blood_Cells_monocyte_normal_AP_A19991312   
SAGE_Bladder_Cancer_B_hs02645833968561   
SAGE_Bladder_Cancer_B_hs02664244612341   
SAGE_Brain_astrocytoma_grade_III_B_34310015811   
SAGE_Brain_astrocytoma_grade_III_B_43910782411   
SAGE_Brain_astrocytoma_grade_III_B_58410300811   
SAGE_Brain_astrocytoma_grade_III_B_H105510988611   
SAGE_Brain_astrocytoma_grade_III_B_H97010698211   
SAGE_Brain_astrocytoma_grade_III_B_R92710734411   
SAGE_Brain_astrocytoma_grade_II_B_H12711448911   
SAGE_Brain_astrocytoma_grade_II_B_H51811602211   
SAGE_Brain_ependymoma_B_R102312269011   
SAGE_Brain_fetal_normal_B_S130554621   
SAGE_Brain_glioblastoma_B_H83310060011   
SAGE_Brain_glioblastoma_CL_stem_cells10841411   
SAGE_Breast_Carcinoma_CD24+_C2_IDC344720960321   
SAGE_Breast_Carcinoma_CD24+_C3_IDC384117410241   
SAGE_Breast_Carcinoma_CD24+_C4_IDC403570910331   
SAGE_Breast_Normal_Epithelium_CD24+_N1_N339646880651   
SAGE_Breast_Normal_Epithelium_CD24+_N4_N481802274111   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGD010986211   
SAGE_Embryonic_stem_cell_normal_CL_hs02383636083231   
SAGE_Foreskin_normal_B_hs03053940350391   
SAGE_Kidney_carcinoma_B_D210028111   
SAGE_Lymph_node_Lymphoma_B_hs02045178993461   
SAGE_Retina_Macula_normal_B_4Mac10141711   
SAGE_Retina_Peripheral_normal_B_210531211   
SAGE_Retina_macula_normal_B_HMAC210241711   
SAGE_Retina_normal_B_4cRet10370111   
SAGE_Skin_Melanoma_B_hs02733881770331   
SAGE_Skin_Melanoma_B_hs02765631800291   
SAGE_Skin_Normal_B_hs02715807686321   
SAGE_Skin_Normal_B_hs02724397550321   
SAGE_Skin_Normal_B_hs02775269789401   
SAGE_Skin_Normal_B_hs02783042221211   
SAGE_Thyroid_normal_B_00111593811   
SAGE_Vein_normal_B_hs02376135688491   
SAGE_Bladder_Cancer_B_hs02413335801100   
SAGE_Bladder_Cancer_B_hs02654640198220   
SAGE_Breast_Normal_Epithelium_CD44+_N7_N5811007864480   
SAGE_Embryonic_stem_cell_BG01_normal_p20_CL_SHE1920166810   
SAGE_Lymph_node_Lymphoma_B_hs01964791481160   
SAGE_Skin_Melanoma_B_hs02743895211180   
SAGE_Skin_Melanoma_B_hs02754128221200   
SAGE_Skin_Normal_B_hs0282441163690   
SAGE_Urothelium_normal_B_hs0239311430720