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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Digital Northern Results

Search query: TGTCCTCCCC

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Tags per 200,000 <2 <4 <8 <16 <32 <64 <128 <256 <512 >512

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SAGE_Breast_carcinoma_epithelium_CD44+_AP_ASC352478726   
SAGE_Brain_normal_cortex_B_pool662451825   
SAGE_Kidney_embryonic_CL_293+beta-catenin23519217   
SAGE_White_Blood_Cells_monocytes_normal_AP_A298786816   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC765091515   
SAGE_Stomach_carcinoma_B_xenograph_X4351620415   
SAGE_Brain_normal_cerebellum_B_BB54240500314   
SAGE_Brain_normal_cortex_B_BB54294233714   
SAGE_Breast_normal_epithelium_CD24+_AP_N1541430314   
SAGE_Ovary_cystadenoma_CL_ML10-1055144414   
SAGE_Pelvis_mixoid_chondrosarcoma_grade2_B_UIHT083577614   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS789184613   
SAGE_Pancreas_adenocarcinoma_B_96-625233213212   
SAGE_Pancreas_normal_CS_H12632223212   
SAGE_Brain_ependymoma_B_R58252189311   
SAGE_Cartilage_chondrosarcoma_grade_3_CL_UIIA068021411   
SAGE_Pancreas_adenocarcinoma_B_91-1611333582211   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P250297311   
SAGE_Breast_carcinoma_B_95-25939364210   
SAGE_Breast_normal_epithelium_MUC1+_AP_N576227410   
SAGE_Cartilage_chondrosarcoma_grade_2_CL_UIGE077757410   
SAGE_Prostate_normal_MD_PR31759277310   
SAGE_Brain_astrocytoma_grade_II_B_H38810628559   
SAGE_Breast_carcinoma_CL_MDA435H484032329   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC96353939   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC96593539   
SAGE_Ovary_adenocarcinoma_B_OVT-64144329   
SAGE_Ovary_carcinoma_CL_A27802136919   
SAGE_Prostate_adenocarcinoma_MD_PR3176495139   
SAGE_Prostate_carcinoma_CL_LNCaP-C4002929   
SAGE_Retina_Peripheral_normal_B_4Peri12669169   
SAGE_Brain_astrocytoma_grade_III_B_8289993948   
SAGE_Brain_ependymoma_B_R102312269058   
SAGE_Brain_normal_leptomeninges_B_AL27247338   
SAGE_Brain_normal_thalamus_B_12401518   
SAGE_Esophagus_Adenocarcinoma_B_CA1D7379338   
SAGE_Retinal_Pigment_Epithelium_normal_B_4PeriRPE9019948   
SAGE_White_Blood_Cells_monocyte_normal_AP_A19991348   
SAGE_Brain_normal_peds_cortex_B_H15717755437   
SAGE_Breast_carcinoma_epithelium_CD44+_AP_PE25234227   
SAGE_Breast_normal_epithelium_CD44+_AP_N25600827   
SAGE_Breast_normal_myoepithelium_CL_HME505551627   
SAGE_Peritoneum_normal_B_135352727   
SAGE_Retinal_Pigment_Epithelium_normal_B_4MacRPE7726237   
SAGE_Spinal_cord_normal_B_15478527   
SAGE_White_Blood_Cells_monocyte_depleted_mononuclear_cells_normal_AP_A15379527   
SAGE_White_Blood_Cells_monocyte_depleted_mononuclear_cells_normal_AP_P15163427   
SAGE_White_Blood_Cells_monocytes_normal_AP_P25442627   
SAGE_Brain_ependymoma_B_11506237326   
SAGE_Brain_glioblastoma_B_H1425C8899036   
SAGE_Brain_glioblastoma_B_R709909936   
SAGE_Brain_meningioma_grade_III_B_SF23665978626   
SAGE_Breast_Normal_Epithelium_CD44+_N6_N481048765366   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIFK08594436   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGX08843936   
SAGE_Eye_lens_B_UIHI08589836   
SAGE_Lung_tumor_associated_chronic_inflammation_B_UIHM09896236   
SAGE_Ovary_carcinoma_CL_ES2-13115916   
SAGE_Pancreas_carcinoma_CL_ASPC3122416   
SAGE_Pancreas_normal_CS_HX3198516   
SAGE_Peritoneum_mesothelioma_B_123252916   
SAGE_Prostate_carcinoma_CL_A+3029816   
SAGE_Stomach_adenocarcinoma_B_G2346492526   
SAGE_Testis_Embyronal_Carcinoma_B_16635226   
SAGE_Bone_marrow_normal_B_D013657715   
SAGE_Brain_ependymoma_B_R5127537925   
SAGE_Brain_glioblastoma_B_H83310060035   
SAGE_Brain_glioblastoma_B_R33610232235   
SAGE_Brain_medulloblastoma_B_97-05-P3127429525   
SAGE_Breast_Normal_Epithelium_CD24+_N1_N3396468802785   
SAGE_Breast_carcinoma_MD_LCIS6783425   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC87396725   
SAGE_Breast_carcinoma_myoepithelium_X_ITGB6+_AP7878525   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N57617325   
SAGE_Retina_normal_B_4cRet10370135   
SAGE_Thyroid_normal_B_00111593835   
SAGE_White_Blood_Cells_monocytes_normal_AP_C110165635   
SAGE_Brain_astrocytoma_grade_III_B_H2729605924   
SAGE_Brain_astrocytoma_grade_II_B_H50112830934   
SAGE_Brain_fetal_normal_B_S130554674   
SAGE_Brain_glioblastoma_B_H135312480534   
SAGE_Brain_medulloblastoma_CL_H3414392014   
SAGE_Brain_medulloblastoma_CL_mhh-14785814   
SAGE_Brain_meningioma_grade_II_B_SF36224485714   
SAGE_Breast_Normal_Epithelium_CD24+_N2_N35135842232894   
SAGE_Breast_Normal_Epithelium_CD24+_N3_N473036002724   
SAGE_Breast_Normal_Epithelium_CD44+_N5_N471890938424   
SAGE_Breast_carcinoma_B_DCIS-54309814   
SAGE_Breast_metastatic_carcinoma_B_LN14508714   
SAGE_Breast_normal_epithelium_BEREP4+_AP_N14872914   
SAGE_Colon_adenocarcinoma_B_Tu984137114   
SAGE_GallBladder_Normal_B_HN8570624   
SAGE_Kidney_Glomeruli_Normal_B_bjballer14890514   
SAGE_Kidney_embryonic_CL_293-control4195514   
SAGE_Ovary_normal_CL_IOSE29EC-114715914   
SAGE_Prostate_carcinoma_CL_LNCaP-T4354214   
SAGE_Stomach_adenocarcinoma_MD_G3294680214   
SAGE_Stomach_adenocarcinoma_MD_HG79371424   
SAGE_Bone_Marrow_AML_FS_CD34+CD38+6151913   
SAGE_Brain_astrocytoma_grade_III_B_40710831223   
SAGE_Brain_astrocytoma_grade_III_B_43910782423   
SAGE_Brain_astrocytoma_grade_III_B_H105510988623   
SAGE_Brain_astrocytoma_grade_III_B_H97010698223   
SAGE_Brain_astrocytoma_grade_II_B_H51610811623   
SAGE_Brain_astrocytoma_grade_II_B_H53010243923   
SAGE_Brain_ependymoma_B_13945631413   
SAGE_Brain_ependymoma_B_R62812043123   
SAGE_Brain_glioblastoma_B_R2010105323   
SAGE_Brain_glioblastoma_CL_H3925599013   
SAGE_Brain_glioblastoma_CL_stem_cells10841423   
SAGE_Brain_medulloblastoma_B_96-04-P0195264513   
SAGE_Brain_normal_cerebellum_B_15038513   
SAGE_Breast_Normal_Epithelium_CD44+_N7_N58110078642183   
SAGE_Breast_carcinoma_B_IDC-56045113   
SAGE_Breast_carcinoma_CL_MCF7control_0h5987713   
SAGE_Breast_carcinoma_associated_myoepithelium_CD10+_AP_DCIS75199313   
SAGE_Breast_carcinoma_associated_stroma_B_DCIS65704913   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_IDC285795613   
SAGE_Breast_normal_organoid_B5818113   
SAGE_Breast_phyllodes_tumor_fibroblasts_AP_0702025957513   
SAGE_Colon_adenocarcinoma_CL_SW8376114813   
SAGE_Liver_cholangiocarcinoma_B_K16031913   
SAGE_Liver_cholangiocarcinoma_CL_K35484213   
SAGE_Liver_normal_B_16630813   
SAGE_Ovary_adenocarcinoma_B_OVT-75351413   
SAGE_Placenta_normal_B_111808323   
SAGE_Prostate_carcinoma_CL_LNCaP_no-DHT6216013   
SAGE_Prostate_normal_B_26405813   
SAGE_Skin_Normal_B_hs02824411636673   
SAGE_Stomach_carcinoma_B_G1896307513   
SAGE_Uterus_normal_B_hs01953718463653   
SAGE_Vascular_normal_CS_control5164213   
SAGE_White_Blood_Cells_lung_macrophage_normal_AP_L15187213   
SAGE_White_Blood_Cells_monocyte_normal_AP_P110115823   
SAGE_Bladder_Cancer_B_hs02406216426792   
SAGE_Brain_Medulloblastoma_CL_425Otx2siRNA9729112   
SAGE_Brain_Medulloblastoma_CL_UW228-N9493712   
SAGE_Brain_Medulloblastoma_CL_UW228-V28082712   
SAGE_Brain_astrocytoma_grade_II_B_H5638856812   
SAGE_Brain_astrocytoma_grade_I_B_H10437592212   
SAGE_Brain_ependymoma_B_H5806861412   
SAGE_Brain_ependymoma_B_R3537382212   
SAGE_Brain_ependymoma_B_R5108407312   
SAGE_Brain_glioblastoma_B_H11106898612   
SAGE_Brain_glioblastoma_hypoxia_CL_H2477176512   
SAGE_Brain_medulloblastoma_B_DL76839212   
SAGE_Brain_medulloblastoma_B_H8766740412   
SAGE_Breast_Carcinoma_EPCR+_C5_IDC273796568392   
SAGE_Breast_Carcinoma_EPCR+_C6_IDC314208755442   
SAGE_Breast_Normal_Epithelium_CD24+_N4_N481802274212   
SAGE_Breast_carcinoma_B_IDC-36889112   
SAGE_Breast_normal_epithelium_CD44+_AP_N58046412   
SAGE_Breast_normal_epithelium_MUC1+_AP_N157170412   
SAGE_Cartilage_chondrosarcoma_grade_2_CL_UIFU07501912   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Anoxia7905312   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Normal_Oxygen7928412   
SAGE_Colon_carcinoma_CL_Hct116_wildtype_p53_Normal_Oxygen8039812   
SAGE_GallBladder_Adenocarcinoma_B_HAIIb6698812   
SAGE_Heart_normal_B_18306312   
SAGE_Lung_adenocarcinoma_MD_L108688712   
SAGE_Lymph_Node_Lymphoma_B_17200812   
SAGE_Lymph_Node_normal_B_19942612   
SAGE_Skin_Normal_B_hs02816517089782   
SAGE_Stomach_carcinoma_B_xenograft_X1016974912   
SAGE_Uterus_Normal_B_hs01946452623852   
SAGE_Vascular_endothelium_hemangioma_B_1467568012   
SAGE_Vascular_endothelium_normal_liver_associated_AP_NLEC17775912   
SAGE_Vein_normal_B_hs02306755622772   
SAGE_Bladder_Cancer_B_hs02664244612331   
SAGE_Brain_astrocytoma_grade_III_B_58410300811   
SAGE_Brain_astrocytoma_grade_II_B_H12711448911   
SAGE_Brain_astrocytoma_grade_II_B_H51811602211   
SAGE_Brain_glioblastoma_CL_28d11062411   
SAGE_Brain_glioblastoma_CL_4d11521211   
SAGE_Breast_Carcinoma_CD24+_C1_IDC314286604421   
SAGE_Breast_Carcinoma_CD24+_C2_IDC344720960251   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGD010986211   
SAGE_Embryonic_stem_cell_H7_normal_p33_CL_SHE1327246521   
SAGE_Kidney_carcinoma_B_D210028111   
SAGE_Peripheral_Blood_Cancer_B_hs04295756848351   
SAGE_Skin_Melanoma_B_hs02765631800441   
SAGE_Skin_Normal_B_hs02775269789461   
SAGE_Thyroid_follicular_carcinoma_B_TT00412466411   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P110287311   
SAGE_Bladder_Cancer_B_hs0241333580120   
SAGE_Bladder_Cancer_B_hs02645833968270   
SAGE_Bladder_Cancer_B_hs0265464019880   
SAGE_Bone_Marrow_Cancer_FS_hs0405490003770   
SAGE_Bone_Marrow_Normal_FS_hs04044842547100   
SAGE_Breast_Carcinoma_CD24+_C3_IDC384117410200   
SAGE_Breast_Carcinoma_CD24+_C4_IDC40357091090   
SAGE_Breast_Carcinoma_SSEA4+_C7_IDC40338124080   
SAGE_Embryo_Pre-Cancer_B_hs03246893016260   
SAGE_Embryonic_stem_cell_H13_normal_p22_CL_SHE1522110110   
SAGE_Embryonic_stem_cell_H14_normal_p22_CL_SHE1421217010   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES240143210   
SAGE_Embryonic_stem_cell_HES3_normal_p16_CL_SHE1020535310   
SAGE_Embryonic_stem_cell_HES4_normal_p36_CL_SHE1120923210   
SAGE_Eye_Retinoblastoma_B_hs038912434232550   
SAGE_Foreskin_normal_B_hs03053940350190   
SAGE_Lymph_node_Lymphoma_B_hs02045178993140   
SAGE_Peripheral_Blood_Cancer_B_hs04306399705130   
SAGE_Skin_Cancer_B_hs02795703298230   
SAGE_Skin_Cancer_B_hs0280361849870   
SAGE_Skin_Cancer_B_hs0283369223950   
SAGE_Skin_Cancer_B_hs02843892507170   
SAGE_Skin_Melanoma_B_hs02733881770180   
SAGE_Skin_Melanoma_B_hs02743895211120   
SAGE_Skin_Melanoma_B_hs0275412822180   
SAGE_Skin_Normal_B_hs02715807686230   
SAGE_Skin_Normal_B_hs02724397550150   
SAGE_Skin_Normal_B_hs02783042221120   
SAGE_Testis_Embryonal_Carcinoma_CL_hs0212637016160   
SAGE_Testis_Embryonal_Carcinoma_CL_hs0213593549030   
SAGE_Urothelium_normal_B_hs02393114307100   
SAGE_Vein_normal_B_hs02376135688210