Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
SAGE Genie
  • Human SAGE Genie Tools
  • Downloads
  • Digital Karyotyping
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Digital Northern Results

Search query: TGGTGCAGCA

Color Code                              
Tags per 200,000 <2 <4 <8 <16 <32 <64 <128 <256 <512 >512

LibraryTotal Tags
in Library
Tag CountsTags per
200,000
Color
Code
SAGE_Skin_melanoma_B_DB24133822106   
SAGE_Breast_carcinoma_CL_ZR75_1_estrogen387971682   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Normal_Oxygen792842973   
SAGE_Breast_carcinoma_CL_ZR75_1_tamoxifen400521364   
SAGE_Brain_Medulloblastoma_CL_425C2626422063   
SAGE_GallBladder_Adenocarcinoma_B_NAM01785482153   
SAGE_Colon_carcinoma_CL_Hct116_wildtype_p53_Normal_Oxygen803981947   
SAGE_Breast_carcinoma_CL_MCF7estradiol_10H607251446   
SAGE_Lymph_Node_Lymphoma_B_1720081644   
SAGE_Prostate_carcinoma_CL_LNCaP-T43542941   
SAGE_Testis_Embyronal_Carcinoma_B_1663521236   
SAGE_Breast_carcinoma_B_95-25939364735   
SAGE_Breast_metastatic_carcinoma_B_LN145087835   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS-2661681133   
SAGE_Kidney_embryonic_CL_293-control41955733   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_PE250132831   
SAGE_Brain_Medulloblastoma_CL_425Otx2siRNA972911530   
SAGE_Brain_medulloblastoma_B_98-13-P30145342730   
SAGE_Breast_carcinoma_CL_MDA435H2446631730   
SAGE_Breast_carcinoma_CL_ZR75_1_untreated32303530   
SAGE_Brain_astrocytoma_grade_III_B_3431001581529   
SAGE_Brain_glioblastoma_B_R201010531529   
SAGE_Breast_carcinoma_B_95-347670701029   
SAGE_Stomach_normal_MD_14S733531129   
SAGE_Brain_normal_peds_cortex_B_H1571775541128   
SAGE_Brain_normal_substantia_nigra_B_141773628   
SAGE_Breast_carcinoma_B_IDC-464095928   
SAGE_Breast_normal_FS_NER34565528   
SAGE_Brain_glioblastoma_CL_4d1152121627   
SAGE_Brain_medulloblastoma_B_98-09-P558859841227   
SAGE_Brain_medulloblastoma_CL_H34143920627   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_IDC2857956827   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Anoxia790531127   
SAGE_Brain_medulloblastoma_B_H132259498826   
SAGE_Breast_carcinoma_CL_MCF7estradiol_3h60162826   
SAGE_Breast_metastatic_carcinoma_B_LN260343826   
SAGE_Prostate_carcinoma_B_LN-122599326   
SAGE_Testis_Embryonal_Carcinoma_CL_hs0213593549077626   
SAGE_Brain_Medulloblastoma_CL_UW228-N949371225   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_IDC2639361525   
SAGE_Brain_glioblastoma_CL_H54+EGFRvIII56982724   
SAGE_Brain_medulloblastoma_B_98-05-P040892581124   
SAGE_Brain_medulloblastoma_B_H48457469724   
SAGE_Cartilage_chondrosarcoma_grade_1_CL_UIIC033081424   
SAGE_Placenta_first_trimester_normal_B_1892651124   
SAGE_Prostate_carcinoma_CL_LNCaP-C40029524   
SAGE_Brain_glioblastoma_CL_stem_cells1084141323   
SAGE_Brain_medulloblastoma_B_98-04-P49443068523   
SAGE_Brain_medulloblastoma_B_DL768392823   
SAGE_Embryonic_stem_cell_H1_normal_p31_CL_SHE172762033223   
SAGE_Retina_Peripheral_normal_B_159661723   
SAGE_Brain_glioblastoma_B_H1425C889901022   
SAGE_Embryonic_stem_cell_H7_normal_p33_CL_SHE132724653022   
SAGE_Liver_cholangiocarcinoma_CL_K452973622   
SAGE_Muscle_normal_B_young53947622   
SAGE_Prostate_normal_epithelium_CS_senescent71717822   
SAGE_Brain_glioblastoma_CL_28d1106241221   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES11517351621   
SAGE_Heart_normal_B_183063921   
SAGE_Liver_cholangiocarcinoma_CL_K354842621   
SAGE_Retina_normal_B_4cRet1037011121   
SAGE_Breast_Carcinoma_EPCR+_C6_IDC31420875543920   
SAGE_Breast_carcinoma_CL_MCF7control_0h59877620   
SAGE_Breast_normal_epithelium_BEREP4+_AP_N148729520   
SAGE_Breast_normal_epithelium_MUC1+_AP_N576227820   
SAGE_Lymph_Node_normal_B_1994261020   
SAGE_Brain_astrocytoma_grade_II_B_H5301024391019   
SAGE_Brain_medulloblastoma_B_H141361853619   
SAGE_Breast_Carcinoma_CD24+_C1_IDC31428660441619   
SAGE_Breast_carcinoma_CL_MDA435H4840323419   
SAGE_Breast_carcinoma_epithelium_CD44+_AP_ASC352478519   
SAGE_Breast_carcinoma_epithelium_CD44+_AP_PE252342519   
SAGE_Colon_adenocarcinoma_CL_RKO51294519   
SAGE_Kidney_carcinoma_B_D21002811019   
SAGE_Pancreas_carcinoma_CL_ASPC31224319   
SAGE_Stomach_carcinoma_B_G18963075619   
SAGE_White_Blood_Cells_lung_macrophage_normal_AP_L151872519   
SAGE_Brain_medulloblastoma_CL_D28366316618   
SAGE_Brain_oligodendroglioma_B_100132442318   
SAGE_Breast_carcinoma_B_CT15_IDC21840218   
SAGE_Breast_carcinoma_B_DCIS-543098418   
SAGE_Breast_normal_myoepithelium_CL_HME5055516518   
SAGE_Embryonic_stem_cell_BG01_normal_p20_CL_SHE192016681918   
SAGE_Embryonic_stem_cell_H13_normal_p22_CL_SHE152211012118   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES24014323718   
SAGE_Embryonic_stem_cell_HES3_normal_p16_CL_SHE102053531918   
SAGE_Ovary_carcinoma_CL_A278021369218   
SAGE_Stomach_adenocarcinoma_B_G23464925618   
SAGE_Uterus_endometrium_normal_CS_DI121991218   
SAGE_Vascular_endothelium_normal_liver_associated_AP_NLEC177759718   
SAGE_Brain_ependymoma_B_23946653417   
SAGE_Breast_carcinoma_myoepithelium_X_ITGB6+_AP78785717   
SAGE_GallBladder_Adenocarcinoma_B_C0181380717   
SAGE_Kidney_embryonic_CL_293+beta-catenin23519217   
SAGE_Thyroid_follicular_adenoma_B_TT005101578917   
SAGE_Brain_astrocytoma_grade_III_B_H1055109886916   
SAGE_Brain_glioblastoma_B_GBM106259762516   
SAGE_Brain_glioblastoma_control_CL_H24760428516   
SAGE_Brain_medulloblastoma_B_C60974612616   
SAGE_Brain_medulloblastoma_B_DL583671716   
SAGE_Brain_meningioma_grade_II_B_SF217648711416   
SAGE_Breast_Normal_Epithelium_CD24+_N2_N3513584223112216   
SAGE_Breast_carcinoma_CL_MDA435C47270416   
SAGE_Breast_carcinoma_epithelium_BerEP4+AP_IDC773410616   
SAGE_Breast_normal_epithelium_MUC1+_AP_N1571704616   
SAGE_Embryonic_stem_cell_H14_normal_p22_CL_SHE142121701816   
SAGE_GallBladder_Normal_B_HN85706716   
SAGE_Lung_adenocarcinoma_B_136256316   
SAGE_Lung_adenocarcinoma_MD_L935916316   
SAGE_Pancreas_adenocarcinoma_CL_Panc124749216   
SAGE_Skin_normal_B_NS36615316   
SAGE_Brain_ependymoma_B_R45551825415   
SAGE_Brain_medulloblastoma_CL_4-HCR66599515   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N576173615   
SAGE_Embryonic_stem_cell_H1_normal_p54_CL_SHE162182141715   
SAGE_Skin_melanoma_B_DB126032215   
SAGE_Universal_reference_human_RNA_CL51729415   
SAGE_Bladder_Cancer_B_hs0264583396843514   
SAGE_Brain_astrocytoma_grade_II_B_H501128309914   
SAGE_Brain_glioblastoma_B_H111068986514   
SAGE_Brain_glioblastoma_CL_H54+LacZ66908514   
SAGE_Breast_fibroadenoma_MD55688414   
SAGE_Breast_normal_epithelium_CD24+_AP_N241551314   
SAGE_Cartilage_chondrosarcoma_grade_2_B_UIGA093846714   
SAGE_Muscle_normal_B_old53889414   
SAGE_Ovary_cystadenoma_CL_ML10-1055144414   
SAGE_Peritoneum_normal_B_1353527414   
SAGE_Retina_Peripheral_normal_B_4Peri126691914   
SAGE_White_Blood_Cells_monocyte_normal_AP_A199913714   
SAGE_Brain_astrocytoma_grade_III_B_584103008713   
SAGE_Brain_astrocytoma_grade_II_B_H127114489813   
SAGE_Brain_astrocytoma_grade_II_B_H56388568613   
SAGE_Brain_ependymoma_B_R1023122690813   
SAGE_Brain_medulloblastoma_B_H30660454413   
SAGE_Breast_carcinoma_B_IDC-560451413   
SAGE_Esophagus_Dysplasia_B_LGD0174904513   
SAGE_Esophagus_Normal_B_CN0175634513   
SAGE_Lung_normal_B_188708613   
SAGE_Lymph_node_Lymphoma_B_hs0204517899334613   
SAGE_Muscle_Rhabdomyosarcoma_B_161270413   
SAGE_Pancreas_carcinoma_CL_PL4529557213   
SAGE_Retina_Peripheral_normal_B_2105312713   
SAGE_Retina_Retinoblastoma_B_188490613   
SAGE_Retina_macula_normal_B_HMAC2102417713   
SAGE_Brain_astrocytoma_grade_II_B_H518116022712   
SAGE_Brain_glioblastoma_B_H137149338312   
SAGE_Colon_carcinoma_CL_Hct116_wildtype_p53_Anoxia79015512   
SAGE_Liver_cholangiocarcinoma_B_K2D46853312   
SAGE_Liver_normal_B_166308412   
SAGE_Pancreas_adenocarcinoma_B_96-625233213212   
SAGE_Prostate_carcinoma_CL_LNCaP_no-DHT62160412   
SAGE_Prostate_normal_B_264058412   
SAGE_Thyroid_normal_B_001115938712   
SAGE_Bone_marrow_normal_AP_CD34+/CD38-/lin-86391511   
SAGE_Brain_astrocyte_normal_CL_NHA551481311   
SAGE_Brain_astrocytoma_grade_II_B_H388106285611   
SAGE_Brain_ependymoma_B_R51084073511   
SAGE_Brain_medulloblastoma_B_96-04-P01952645311   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIFK085944511   
SAGE_Embryonic_stem_cell_HSF6_normal_p50_CL_SHES92244881311   
SAGE_Ovary_adenocarcinoma_B_OVT-753514311   
SAGE_Pancreas_adenocarcinoma_B_91-1611333582211   
SAGE_Placenta_hydatidiform_mole_B_1101677611   
SAGE_Vein_normal_B_hs0237613568836811   
SAGE_Brain_astrocytoma_grade_III_B_82899939510   
SAGE_Brain_astrocytoma_grade_III_B_H27296059510   
SAGE_Brain_ependymoma_B_R35373822410   
SAGE_Brain_glioblastoma_B_R7099099510   
SAGE_Brain_glioblastoma_CL_H39255990310   
SAGE_Brain_medulloblastoma_B_97-05-P31274295410   
SAGE_Breast_phyllodes_tumor_fibroblasts_AP_07020259575310   
SAGE_Embryonic_stem_cell_HES4_normal_p36_CL_SHE112092321110   
SAGE_Esophagus_Dysplasia_B_HGD0278611410   
SAGE_Pancreas_adenocarcinoma_CL_CAPAN137674210   
SAGE_Prostate_carcinoma_CL_PC3_Mock38819210   
SAGE_Prostate_normal_MD_PR31759277310   
SAGE_Retinal_Pigment_Epithelium_normal_B_4MacRPE77262410   
SAGE_Skin_Melanoma_B_hs0276563180029510   
SAGE_Bladder_Cancer_B_hs026642446122089   
SAGE_Bone_marrow_normal_AP_CD34+/CD38+/lin+8159549   
SAGE_Brain_astrocytoma_grade_II_B_H35910576459   
SAGE_Brain_astrocytoma_grade_II_B_H51610811659   
SAGE_Brain_fetal_normal_B_S1305546149   
SAGE_Brain_glioblastoma_B_H135312480569   
SAGE_Brain_medulloblastoma_B_H9728537649   
SAGE_Breast_Carcinoma_CD24+_C3_IDC3841174101989   
SAGE_Breast_carcinoma_MD_DCIS4078329   
SAGE_Colon_adenocarcinoma_B_Tu984137129   
SAGE_Colon_adenocarcinoma_CL_Caco26068239   
SAGE_Kidney_normal_B_14099329   
SAGE_Lung_adenocarcinoma_MD_L108688749   
SAGE_Peripheral_Blood_Cancer_B_hs043063997052889   
SAGE_Prostate_carcinoma_CL_PC3_AS24076829   
SAGE_Retina_Macula_normal_B_4Mac10141759   
SAGE_Rheumatoid_arthritis_synovial_fibroblast_CS4247229   
SAGE_Uterus_Normal_B_hs019464526233139   
SAGE_Brain_astrocytoma_grade_III_B_R14011873358   
SAGE_Brain_ependymoma_B_H5806861438   
SAGE_Brain_glioblastoma_hypoxia_CL_H2477176538   
SAGE_Brain_medulloblastoma_B_H8766740438   
SAGE_Brain_normal_cortex_B_BB5429423348   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS67285738   
SAGE_Breast_carcinoma_metastasis_B_24979428   
SAGE_Esophagus_Adenocarcinoma_B_CA1D7379338   
SAGE_Kidney_Glomeruli_Normal_B_bjballer14890528   
SAGE_Lung_tumor_associated_chronic_inflammation_B_UIHM09896248   
SAGE_Ovary_normal_CS_HOSE_44772828   
SAGE_Prostate_adenocarcinoma_CL_LNCaP2234418   
SAGE_Skin_Cancer_B_hs027957032982418   
SAGE_Testis_Embryonal_Carcinoma_CL_hs021263701612838   
SAGE_White_Blood_Cells_monocytes_normal_AP_A29878648   
SAGE_Bladder_Cancer_B_hs026546401981747   
SAGE_Brain_astrocytoma_grade_III_B_40710831247   
SAGE_Brain_ependymoma_B_13945631427   
SAGE_Brain_ependymoma_B_R5825218927   
SAGE_Brain_glioblastoma_B_H83310060047   
SAGE_Brain_glioblastoma_B_R33610232247   
SAGE_Brain_glioblastoma_B_pooled5642827   
SAGE_Brain_meningioma_grade_I_B_SF44655464727   
SAGE_Brain_normal_cerebellum_B_15038527   
SAGE_Brain_oligodendroglioma_B_H9882786417   
SAGE_Breast_Carcinoma_CD24+_C4_IDC4035709101297   
SAGE_Breast_Carcinoma_EPCR+_C5_IDC2737965681427   
SAGE_Breast_Normal_Epithelium_CD24+_N1_N3396468803597   
SAGE_Breast_Normal_Epithelium_CD24+_N3_N4730360021107   
SAGE_Breast_carcinoma_B_BWHT18_DCIS5070127   
SAGE_Breast_carcinoma_epithelium_PROCR+_AP_IDC285278127   
SAGE_Breast_normal_epithelium_CD44+_AP_N58046437   
SAGE_Spinal_cord_normal_B_15478527   
SAGE_Stomach_normal_B_antrum2665317   
SAGE_Vascular_endothelium_hemangioma_B_1467568037   
SAGE_White_Blood_Cells_monocyte_depleted_mononuclear_cells_normal_AP_P15163427   
SAGE_Bone_Marrow_AML_FS_CD34+CD38+6151926   
SAGE_Brain_ependymoma_B_11506237326   
SAGE_Brain_ependymoma_B_R62812043146   
SAGE_Breast_Normal_Epithelium_CD24+_N4_N481802274636   
SAGE_Breast_Normal_Epithelium_CD44+_N5_N471890938576   
SAGE_Breast_Normal_Epithelium_CD44+_N6_N481048765336   
SAGE_Breast_carcinoma_B_DCIS-46060526   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS-35740226   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS78918436   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC86652026   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGX08843936   
SAGE_Lung_normal_CL_L162898316   
SAGE_Ovary_adenocarcinoma_B_OVT-83198716   
SAGE_Ovary_carcinoma_CL_ES2-13115916   
SAGE_Pancreas_normal_CS_H1263222316   
SAGE_Peritoneum_mesothelioma_B_123252916   
SAGE_Prostate_carcinoma_B_pool26603426   
SAGE_Prostate_carcinoma_CL_A+3029816   
SAGE_Prostate_carcinoma_CL_LNCaP6025026   
SAGE_Retinal_Pigment_Epithelium_normal_B_4PeriRPE9019936   
SAGE_Skin_Cancer_B_hs028036184981136   
SAGE_Stomach_adenocarcinoma_MD_HG79371436   
SAGE_Stomach_adenocarcinoma_MD_HS295883126   
SAGE_Thyroid_follicular_carcinoma_B_TT00412466446   
SAGE_Brain_astrocytoma_grade_III_B_H97010698235   
SAGE_Brain_astrocytoma_grade_III_B_R92710734435   
SAGE_Brain_astrocytoma_grade_I_B_H10437592225   
SAGE_Brain_medulloblastoma_B_97-05-P0156997125   
SAGE_Brain_medulloblastoma_B_H2757231825   
SAGE_Brain_meningioma_grade_I_B_SF42716925325   
SAGE_Breast_Carcinoma_CD24+_C2_IDC3447209601365   
SAGE_Breast_carcinoma_B_IDC-36889125   
SAGE_Breast_carcinoma_MD_LCIS6783425   
SAGE_Breast_carcinoma_associated_stroma_B_IDC76802425   
SAGE_Breast_carcinoma_epithelium_X_MUC1+_AP7514725   
SAGE_Breast_normal_epithelium_CD24+_AP_N57646925   
SAGE_Cartilage_chondrosarcoma_grade_2_CL_UIFU07501925   
SAGE_Eye_Retinoblastoma_B_hs0389124342323385   
SAGE_GallBladder_Adenocarcinoma_B_HAIIb6698825   
SAGE_Lymph_node_Lymphoma_B_hs019647914811315   
SAGE_Skin_Cancer_B_hs028438925071005   
SAGE_Stomach_carcinoma_B_xenograft_X1016974925   
SAGE_Uterus_normal_B_hs019537184631015   
SAGE_Vein_normal_B_hs023067556221765   
SAGE_White_Blood_Cells_monocyte_normal_AP_P110115835   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P110287335   
SAGE_Brain_Medulloblastoma_CL_UW228-V28082724   
SAGE_Brain_glioblastoma_CS_TA24667814   
SAGE_Brain_medulloblastoma_B_98-05-P6084845114   
SAGE_Brain_medulloblastoma_CL_mhh-14785814   
SAGE_Brain_normal_cerebellum_B_BB5424050014   
SAGE_Colon_normal_B_NC14961014   
SAGE_Embryo_Pre-Cancer_B_hs032468930161474   
SAGE_Foreskin_normal_B_hs03053940350904   
SAGE_Leukocytes_normal_B_14787314   
SAGE_Ovary_normal_CL_IOSE29EC-114715914   
SAGE_Peripheral_Blood_Cancer_B_hs042957568481414   
SAGE_Skin_Normal_B_hs027243975501034   
SAGE_Skin_Normal_B_hs027752697891254   
SAGE_Bladder_Cancer_B_hs024062164261073   
SAGE_Brain_astrocytoma_grade_III_B_43910782423   
SAGE_Breast_Normal_Epithelium_CD44+_N7_N58110078641733   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC76509113   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC96353913   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC96593513   
SAGE_Breast_carcinoma_epithelium_PROCR+_AP_IDC295408013   
SAGE_Breast_normal_B_gestational hyperplasia16170413   
SAGE_Breast_normal_epithelium_BEREP4+_AP_N25051213   
SAGE_Breast_normal_epithelium_CD44+_AP_N25600813   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N156399413   
SAGE_Breast_normal_organoid_B5818113   
SAGE_Breast_normal_stroma_B_IDC85048513   
SAGE_Colon_adenocarcinoma_CL_HCT1165564113   
SAGE_Colon_adenocarcinoma_CL_SW8376114813   
SAGE_Placenta_normal_B_111808323   
SAGE_Prostate_adenocarcinoma_MD_PR3176495113   
SAGE_Skin_Melanoma_B_hs02733881770653   
SAGE_Skin_Melanoma_B_hs02743895211773   
SAGE_Skin_Normal_B_hs02783042221483   
SAGE_Skin_Normal_B_hs028165170891133   
SAGE_Stomach_carcinoma_B_xenograph_X435162013   
SAGE_Vascular_endothelium_breast_carcinoma_associated_P1H12+_AP_DCIS66531413   
SAGE_White_Blood_Cells_breast_carcinoma_associated_CD45+_AP_DCIS66617613   
SAGE_White_Blood_Cells_monocyte_depleted_mononuclear_cells_normal_AP_A15379513   
SAGE_White_Blood_Cells_monocytes_normal_AP_C110165623   
SAGE_White_Blood_Cells_monocytes_normal_AP_P25442613   
SAGE_Bladder_Cancer_B_hs02413335801482   
SAGE_Brain_normal_leptomeninges_B_AL27247312   
SAGE_Breast_Carcinoma_SSEA4+_C7_IDC403381240352   
SAGE_Breast_carcinoma_associated_myoepithelium_CD10+_AP_DCIS68145212   
SAGE_Breast_normal_myoepithelium_CD10+_AP_IDC76900612   
SAGE_Embryonic_stem_cell_normal_CL_hs02383636083432   
SAGE_Pelvis_mixoid_chondrosarcoma_grade2_B_UIHT08357712   
SAGE_Skin_Cancer_B_hs02833692239492   
SAGE_Skin_Normal_B_hs02715807686802   
SAGE_Bone_Marrow_Cancer_FS_hs04054900037351   
SAGE_Skin_Melanoma_B_hs02754128221331   
SAGE_Skin_Normal_B_hs02824411636421   
SAGE_Urothelium_normal_B_hs02393114307221   
SAGE_Bone_Marrow_Normal_FS_hs04044842547150