Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
SAGE Genie
  • Human SAGE Genie Tools
  • Downloads
  • Digital Karyotyping
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Digital Northern Results

Search query: TGCAGCACGA

Color Code                              
Tags per 200,000 <2 <4 <8 <16 <32 <64 <128 <256 <512 >512

LibraryTotal Tags
in Library
Tag CountsTags per
200,000
Color
Code
SAGE_Colon_normal_B_NC248479185763   
SAGE_White_Blood_Cells_monocytes_normal_AP_C1101656383753   
SAGE_White_Blood_Cells_monocyte_normal_AP_P1101158261516   
SAGE_White_Blood_Cells_lung_macrophage_normal_AP_L151872120462   
SAGE_White_Blood_Cells_monocyte_depleted_mononuclear_cells_normal_AP_P151634110426   
SAGE_GallBladder_Adenocarcinoma_B_NAM0178548156397   
SAGE_Ovary_adenocarcinoma_B_OVT-83198752325   
SAGE_Breast_Normal_Epithelium_CD24+_N2_N351358422322052324   
SAGE_Breast_Normal_Epithelium_CD24+_N1_N33964688014835307   
SAGE_Breast_carcinoma_epithelium_CD44+_AP_PE25234274282   
SAGE_Breast_Carcinoma_EPCR+_C5_IDC2737965685042265   
SAGE_Pancreas_adenocarcinoma_B_91-161133358244262   
SAGE_Pancreas_adenocarcinoma_B_96-62523321340240   
SAGE_Peritoneum_mesothelioma_B_123252939239   
SAGE_Breast_normal_epithelium_MUC1+_AP_N157170483231   
SAGE_Brain_glioblastoma_B_H11106898679229   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P1102873117227   
SAGE_Pelvis_mixoid_chondrosarcoma_grade2_B_UIHT08357785203   
SAGE_Testis_Embyronal_Carcinoma_B_16635266198   
SAGE_Cartilage_chondrosarcoma_grade_3_CL_UIIA06802167196   
SAGE_Colon_adenocarcinoma_CL_SW8376114857186   
SAGE_Brain_meningioma_grade_III_B_SF23665978655183   
SAGE_Breast_Normal_Epithelium_CD24+_N4_N4818022741460162   
SAGE_Breast_normal_epithelium_CD44+_AP_N58046464159   
SAGE_Breast_normal_epithelium_BEREP4+_AP_N14872937151   
SAGE_Breast_Normal_Epithelium_CD44+_N6_N481048765777148   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_IDC285795642144   
SAGE_Breast_carcinoma_epithelium_PROCR+_AP_IDC285278137140   
SAGE_Breast_carcinoma_epithelium_PROCR+_AP_IDC295408038140   
SAGE_Brain_meningioma_grade_II_B_SF36224485731138   
SAGE_Lung_adenocarcinoma_MD_L93591624133   
SAGE_Breast_normal_epithelium_CD24+_AP_N57646949128   
SAGE_Cartilage_chondrosarcoma_grade_2_CL_UIGE07775750128   
SAGE_Kidney_carcinoma_B_D210028164127   
SAGE_Vascular_endothelium_normal_liver_associated_AP_NLEC17775949126   
SAGE_White_Blood_Cells_breast_carcinoma_associated_CD45+_AP_IDC73439921122   
SAGE_Ovary_adenocarcinoma_B_OVT-64144325120   
SAGE_Brain_astrocytoma_grade_III_B_R14011873370117   
SAGE_Kidney_normal_B_14099324117   
SAGE_Colon_adenocarcinoma_B_Tu984137124116   
SAGE_Leukocytes_normal_B_14787328116   
SAGE_White_Blood_Cells_monocyte_depleted_mononuclear_cells_normal_AP_A15379531115   
SAGE_Breast_Carcinoma_EPCR+_C6_IDC3142087552417114   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC76509137113   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N156399436112   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_PE25013228111   
SAGE_Breast_normal_epithelium_MUC1+_AP_N57622740104   
SAGE_Breast_normal_epithelium_CD24+_AP_N154143021101   
SAGE_Ovary_adenocarcinoma_B_OVT-75351427100   
SAGE_Lung_adenocarcinoma_MD_L10868874092   
SAGE_Bone_marrow_normal_B_D01365771687   
SAGE_Breast_normal_epithelium_BEREP4+_AP_N2505122287   
SAGE_Brain_glioblastoma_hypoxia_CL_H247717653083   
SAGE_Brain_ependymoma_B_R6281204314879   
SAGE_Brain_glioblastoma_control_CL_H247604282479   
SAGE_Pancreas_adenocarcinoma_CL_CAPAN1376741579   
SAGE_White_Blood_Cells_monocytes_normal_AP_A2987863978   
SAGE_Prostate_normal_MD_PR317592772377   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS-2661682575   
SAGE_Breast_carcinoma_B_CT15_IDC21840873   
SAGE_Ovary_endometriosis_CL_E12760972873   
SAGE_Breast_normal_stroma_B_IDC8504851767   
SAGE_Breast_carcinoma_B_IDC-3688912366   
SAGE_Breast_Carcinoma_CD24+_C1_IDC314286604137764   
SAGE_Prostate_carcinoma_CL_PC3_AS2407681363   
SAGE_Stomach_carcinoma_B_xenograft_X101697492263   
SAGE_Bladder_Cancer_B_hs02406216426190961   
SAGE_Stomach_adenocarcinoma_B_G234649252061   
SAGE_Brain_ependymoma_B_R582521891557   
SAGE_Colon_adenocarcinoma_B_Tu102557001657   
SAGE_Breast_carcinoma_epithelium_BerEP4+AP_IDC7734102054   
SAGE_Lung_normal_CL_L15422261152   
SAGE_White_Blood_Cells_monocyte_normal_AP_A1999132652   
SAGE_White_Blood_Cells_monocytes_normal_AP_P2544261451   
SAGE_Brain_oligodendroglioma_B_100132442849   
SAGE_Breast_Normal_Epithelium_CD44+_N7_N5811007864273149   
SAGE_Prostate_adenocarcinoma_MD_PR317649511649   
SAGE_Peritoneum_normal_B_13535271348   
SAGE_Brain_meningioma_grade_I_B_SF4465546471347   
SAGE_Liver_cholangiocarcinoma_CL_K3548421347   
SAGE_Ovary_normal_CS_HOSE_4477281146   
SAGE_Brain_glioblastoma_B_H1425C889901942   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N5761731642   
SAGE_Cartilage_chondrosarcoma_grade_2_CL_UIFU0750191642   
SAGE_Stomach_adenocarcinoma_MD_G329468021042   
SAGE_White_Blood_Cells_breast_carcinoma_associated_CD45+_AP_DCIS6661761442   
SAGE_Breast_carcinoma_B_DCIS-543098941   
SAGE_Brain_astrocytoma_grade_II_B_H563885681840   
SAGE_Lung_tumor_associated_chronic_inflammation_B_UIHM0989622040   
SAGE_Brain_ependymoma_B_R10231226902439   
SAGE_Skin_normal_B_NS36615738   
SAGE_Prostate_normal_B_2640581237   
SAGE_Brain_meningioma_grade_II_B_SF217648711936   
SAGE_Breast_metastatic_carcinoma_B_LN2603431136   
SAGE_GallBladder_Adenocarcinoma_B_C01813801536   
SAGE_Prostate_carcinoma_B_pool2660341236   
SAGE_Vascular_endothelium_hemangioma_B_146756801436   
SAGE_GallBladder_Adenocarcinoma_B_HAIIb669881235   
SAGE_Brain_astrocytoma_grade_II_B_H5011283092234   
SAGE_Cartilage_chondrosarcoma_grade_2_B_UIGA0938461634   
SAGE_Brain_normal_leptomeninges_B_AL2724731233   
SAGE_Vascular_endothelium_breast_carcinoma_associated_P1H12+_AP_DCIS6653141133   
SAGE_Brain_ependymoma_B_H580686141132   
SAGE_Breast_carcinoma_metastasis_B_249794832   
SAGE_Kidney_Glomeruli_Normal_B_bjballer148905832   
SAGE_Pancreas_adenocarcinoma_CL_Panc124749432   
SAGE_Cartilage_chondrosarcoma_grade_1_CL_UIIC033081530   
SAGE_Liver_cholangiocarcinoma_CL_K452973830   
SAGE_Stomach_normal_MD_13S45908730   
SAGE_Breast_carcinoma_B_IDC-560451929   
SAGE_Skin_melanoma_B_DB241338629   
SAGE_Brain_oligodendroglioma_B_H98827864428   
SAGE_Brain_ependymoma_B_R45551825727   
SAGE_Lung_normal_CL_L1628983427   
SAGE_Brain_glioblastoma_B_R70990991326   
SAGE_Breast_carcinoma_B_95-34767070926   
SAGE_Breast_carcinoma_B_DCIS-460605826   
SAGE_Bone_Marrow_Cancer_FS_hs0405490003762425   
SAGE_Muscle_normal_B_old53889725   
SAGE_Prostate_normal_epithelium_CS_senescent71717925   
SAGE_Brain_astrocytoma_grade_III_B_H272960591224   
SAGE_Brain_astrocytoma_grade_II_B_H3881062851324   
SAGE_Colon_normal_B_NC149610624   
SAGE_Pancreas_normal_CS_H12632223424   
SAGE_Brain_astrocytoma_grade_III_B_H102051573623   
SAGE_Brain_ependymoblastoma_B_81933975423   
SAGE_Breast_carcinoma_associated_stroma_B_IDC768024823   
SAGE_Breast_phyllodes_tumor_fibroblasts_AP_07020259575723   
SAGE_Lung_normal_B_1887081022   
SAGE_Prostate_normal_epithelium_CS_confluent71897822   
SAGE_Colon_adenocarcinoma_CL_HCT11655641621   
SAGE_Heart_normal_B_183063921   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS-357402620   
SAGE_Colon_carcinoma_CL_Hct116_wildtype_p53_Anoxia79015820   
SAGE_Stomach_adenocarcinoma_MD_HS2958831620   
SAGE_Breast_carcinoma_CL_MCF7estradiol_10H60725619   
SAGE_Stomach_adenocarcinoma_MD_HG793714919   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P250297519   
SAGE_Breast_carcinoma_CL_ZR75_1_untreated32303318   
SAGE_Skin_Normal_B_hs0277526978948118   
SAGE_Brain_ependymoma_B_23946653417   
SAGE_Brain_medulloblastoma_B_DL768392617   
SAGE_Brain_meningioma_grade_I_B_SF427169253617   
SAGE_Breast_carcinoma_MD_LCIS67834617   
SAGE_Breast_normal_FS_NER34565317   
SAGE_Breast_normal_stroma_AP_179152717   
SAGE_Skin_Normal_B_hs0281651708958217   
SAGE_Bone_Marrow_AML_FS_CD34+CD38+61519516   
SAGE_Brain_astrocytoma_grade_III_B_82899939816   
SAGE_Breast_carcinoma_CL_MDA435C47270416   
SAGE_Stomach_normal_epithelium_B_body124761216   
SAGE_Brain_ependymoma_B_R51275379615   
SAGE_Breast_carcinoma_B_95-25939364315   
SAGE_Breast_carcinoma_associated_myoepithelium_CD10+_AP_DCIS751993415   
SAGE_Eye_Retinoblastoma_B_hs03891243423294315   
SAGE_Retinal_Pigment_Epithelium_normal_B_4MacRPE77262615   
SAGE_Skin_melanoma_B_DB126032215   
SAGE_Brain_glioblastoma_B_pooled56428414   
SAGE_Breast_normal_epithelium_CD24+_AP_N241551314   
SAGE_Breast_normal_myoepithelium_CD10+_AP_IDC769006514   
SAGE_Breast_Normal_Epithelium_CD44+_N5_N47189093813113   
SAGE_Breast_carcinoma_CL_MCF7estradiol_3h60162413   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS789184613   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N157222413   
SAGE_Lymph_node_Lymphoma_B_hs0204517899334713   
SAGE_Prostate_carcinoma_CL_A+30298213   
SAGE_Brain_glioblastoma_B_H1353124805812   
SAGE_Brain_glioblastoma_CS_TA246678312   
SAGE_Breast_carcinoma_B_IDC-464095412   
SAGE_Breast_carcinoma_CL_MDA435H2446631312   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Anoxia79053512   
SAGE_Liver_cholangiocarcinoma_B_K2D46853312   
SAGE_Pancreas_normal_CS_HX31985212   
SAGE_Retina_Peripheral_normal_B_4Peri126691812   
SAGE_Thyroid_normal_B_001115938712   
SAGE_Brain_astrocyte_normal_CL_NHA551481311   
SAGE_Brain_normal_cerebellum_B_150385311   
SAGE_Colon_adenocarcinoma_CL_RKO51294311   
SAGE_Embryonic_stem_cell_H14_normal_p22_CL_SHE142121701211   
SAGE_Lymph_Node_Lymphoma_B_172008411   
SAGE_Muscle_normal_B_young53947311   
SAGE_Retinal_Pigment_Epithelium_normal_B_4PeriRPE90199511   
SAGE_Brain_astrocytoma_grade_III_B_H1055109886610   
SAGE_Brain_ependymoma_B_139456314310   
SAGE_Brain_normal_peds_cortex_B_H157177554410   
SAGE_Breast_carcinoma_CL_MCF7control_0h59877310   
SAGE_Breast_carcinoma_myoepithelium_X_ITGB6+_AP78785410   
SAGE_Breast_normal_epithelium_CD44+_AP_N256008310   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Normal_Oxygen79284410   
SAGE_Esophagus_Dysplasia_B_HGD0278611410   
SAGE_Prostate_carcinoma_CL_PC3_Mock38819210   
SAGE_Skin_Cancer_B_hs0280361849819510   
SAGE_Uterus_normal_B_hs0195371846319510   
SAGE_Vascular_endothelium_normal_breast_associated_P1H12+_AP_157023310   
SAGE_Brain_astrocytoma_grade_III_B_H97010698259   
SAGE_Brain_normal_substantia_nigra_B_14177329   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC96353939   
SAGE_Embryonic_stem_cell_H13_normal_p22_CL_SHE15221101109   
SAGE_Fibroblasts_CL_postcrisis2183319   
SAGE_Liver_cholangiocarcinoma_B_K16031939   
SAGE_Muscle_Rhabdomyosarcoma_B_16127039   
SAGE_Ovary_carcinoma_CL_A27802136919   
SAGE_Prostate_carcinoma_CL_LNCaP6025039   
SAGE_Prostate_carcinoma_CL_LNCaP-C4002929   
SAGE_Prostate_carcinoma_CL_LNCaP_no-DHT6216039   
SAGE_Thyroid_follicular_carcinoma_B_TT00412466469   
SAGE_Uterus_Normal_B_hs019464526232979   
SAGE_Uterus_endometrium_normal_CS_DI12199119   
SAGE_Bladder_Cancer_B_hs026458339682418   
SAGE_Brain_astrocytoma_grade_II_B_H51811602258   
SAGE_Brain_ependymoma_B_R3537382238   
SAGE_Brain_glioblastoma_B_H13714933828   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC87396738   
SAGE_Embryonic_stem_cell_H7_normal_p33_CL_SHE13272465128   
SAGE_Prostate_adenocarcinoma_CL_LNCaP2234418   
SAGE_Prostate_carcinoma_B_LN-12259918   
SAGE_Brain_astrocytoma_grade_III_B_40710831247   
SAGE_Brain_astrocytoma_grade_III_B_43910782447   
SAGE_Brain_ependymoma_B_R5108407337   
SAGE_Breast_carcinoma_associated_stroma_B_DCIS65704927   
SAGE_Skin_Normal_B_hs027243975501587   
SAGE_Universal_reference_human_RNA_CL5172927   
SAGE_Brain_fetal_normal_B_S1305546106   
SAGE_Breast_Normal_Epithelium_CD24+_N3_N4730360021026   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC96593526   
SAGE_Breast_normal_B_gestational hyperplasia16170426   
SAGE_Breast_normal_organoid_B5818126   
SAGE_Liver_normal_B_16630826   
SAGE_Pancreas_carcinoma_CL_ASPC3122416   
SAGE_Pancreas_carcinoma_CL_PL452955716   
SAGE_Skin_Melanoma_B_hs027656318001966   
SAGE_Vascular_normal_CS_VEGF+5731626   
SAGE_White_Blood_Cells_normal_breast_associated_CD45+_AP3198516   
SAGE_Brain_astrocytoma_grade_III_B_34310015835   
SAGE_Brain_astrocytoma_grade_III_B_R92710734435   
SAGE_Brain_astrocytoma_grade_I_B_H10437592225   
SAGE_Brain_glioblastoma_B_R2010105335   
SAGE_Brain_medulloblastoma_B_C6097461225   
SAGE_Breast_Carcinoma_CD24+_C2_IDC3447209601285   
SAGE_Embryonic_stem_cell_HSF6_normal_p50_CL_SHES922448865   
SAGE_Foreskin_normal_B_hs030539403501035   
SAGE_Vein_normal_B_hs023067556221855   
SAGE_Bone_marrow_normal_AP_CD34+/CD38+/lin+8159524   
SAGE_Bone_marrow_normal_AP_CD34+/CD38-/lin-8639124   
SAGE_Brain_Medulloblastoma_CL_UW228-N9493724   
SAGE_Brain_medulloblastoma_B_98-05-P6084845114   
SAGE_Breast_Carcinoma_CD24+_C3_IDC384117410924   
SAGE_Breast_carcinoma_CL_MDA435H484032314   
SAGE_Breast_metastatic_carcinoma_B_LN14508714   
SAGE_Colon_carcinoma_CL_Hct116_wildtype_p53_Normal_Oxygen8039824   
SAGE_Embryo_Pre-Cancer_B_hs032468930161654   
SAGE_GallBladder_Normal_B_HN8570624   
SAGE_Kidney_embryonic_CL_293-control4195514   
SAGE_Ovary_normal_CL_IOSE29EC-114715914   
SAGE_Peripheral_Blood_Cancer_B_hs042957568481214   
SAGE_Prostate_carcinoma_CL_LNCaP-T4354214   
SAGE_Rheumatoid_arthritis_synovial_fibroblast_CS4247214   
SAGE_Bone_Marrow_Normal_FS_hs04044842547923   
SAGE_Brain_astrocytoma_grade_II_B_H35910576423   
SAGE_Brain_astrocytoma_grade_II_B_H51610811623   
SAGE_Brain_ependymoma_B_11506237313   
SAGE_Brain_glioblastoma_B_H83310060023   
SAGE_Brain_glioblastoma_B_R33610232223   
SAGE_Brain_medulloblastoma_B_96-04-P0195264513   
SAGE_Brain_medulloblastoma_B_H13225949813   
SAGE_Brain_medulloblastoma_B_H14136185313   
SAGE_Brain_normal_cortex_B_pool66245113   
SAGE_Breast_Carcinoma_SSEA4+_C7_IDC403381240623   
SAGE_Breast_carcinoma_B_BWHT18_DCIS5070113   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC86652013   
SAGE_Breast_carcinoma_epithelium_CD44+_AP_ASC35247813   
SAGE_Ovary_cystadenoma_CL_ML10-105514413   
SAGE_Placenta_normal_B_111808323   
SAGE_Retina_Macula_normal_B_4Mac10141723   
SAGE_Retina_Pigment_epithelium_normal_B_15366613   
SAGE_Skin_Cancer_B_hs02843892507623   
SAGE_Skin_Melanoma_B_hs02754128221763   
SAGE_Brain_medulloblastoma_B_97-05-P3127429512   
SAGE_Brain_medulloblastoma_B_98-09-P5588598412   
SAGE_Brain_normal_cortex_B_BB5429423312   
SAGE_Breast_carcinoma_associated_myoepithelium_CD10+_AP_DCIS68145212   
SAGE_Embryonic_stem_cell_H1_normal_p31_CL_SHE1727620332   
SAGE_Embryonic_stem_cell_HES4_normal_p36_CL_SHE1120923232   
SAGE_Retina_Retinoblastoma_B_18849012   
SAGE_Skin_Cancer_B_hs02795703298682   
SAGE_Skin_Cancer_B_hs02833692239452   
SAGE_Skin_Normal_B_hs02715807686602   
SAGE_Bladder_Cancer_B_hs02654640198251   
SAGE_Brain_astrocytoma_grade_III_B_58410300811   
SAGE_Brain_astrocytoma_grade_II_B_H53010243911   
SAGE_Embryonic_stem_cell_HES3_normal_p16_CL_SHE1020535321   
SAGE_Lymph_node_Lymphoma_B_hs01964791481341   
SAGE_Peripheral_Blood_Cancer_B_hs04306399705541   
SAGE_Retina_normal_B_4cRet10370111   
SAGE_Skin_Normal_B_hs02824411636311   
SAGE_Urothelium_normal_B_hs02393114307281   
SAGE_Bladder_Cancer_B_hs02664244612120   
SAGE_Breast_Carcinoma_CD24+_C4_IDC40357091070   
SAGE_Embryonic_stem_cell_BG01_normal_p20_CL_SHE1920166810   
SAGE_Skin_Melanoma_B_hs0273388177020   
SAGE_Skin_Normal_B_hs02783042221100