Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
SAGE Genie
  • Human SAGE Genie Tools
  • Downloads
  • Digital Karyotyping
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Digital Northern Results

Search query: TGAGTTGGCC

Color Code                              
Tags per 200,000 <2 <4 <8 <16 <32 <64 <128 <256 <512 >512

LibraryTotal Tags
in Library
Tag CountsTags per
200,000
Color
Code
SAGE_Prostate_carcinoma_CL_A+30298639   
SAGE_Prostate_carcinoma_CL_LNCaP60250619   
SAGE_Breast_carcinoma_CL_MCF7estradiol_10H60725516   
SAGE_Breast_carcinoma_CL_MCF7estradiol_3h60162516   
SAGE_Rheumatoid_arthritis_synovial_fibroblast_CS42472314   
SAGE_Brain_medulloblastoma_B_98-04-P49443068313   
SAGE_Brain_Medulloblastoma_CL_425Otx2siRNA97291612   
SAGE_Brain_ependymoma_B_115062373412   
SAGE_Kidney_Glomeruli_Normal_B_bjballer148905312   
SAGE_Bone_marrow_normal_AP_CD34+/CD38-/lin-86391511   
SAGE_Brain_glioblastoma_CL_H39255990310   
SAGE_Breast_carcinoma_CL_ZR75_1_estrogen38797210   
SAGE_Breast_carcinoma_myoepithelium_X_ITGB6+_AP78785410   
SAGE_Embryonic_stem_cell_HES3_normal_p16_CL_SHE102053531110   
SAGE_Pancreas_adenocarcinoma_CL_CAPAN137674210   
SAGE_Brain_Medulloblastoma_CL_425C26264239   
SAGE_Brain_ependymoma_B_R5108407349   
SAGE_Brain_glioblastoma_CL_28d11062459   
SAGE_Brain_glioblastoma_CL_stem_cells10841459   
SAGE_Brain_medulloblastoma_CL_4-HCR6659939   
SAGE_Ovary_carcinoma_CL_A27802136919   
SAGE_Prostate_carcinoma_CL_LNCaP-C4002929   
SAGE_Prostate_carcinoma_CL_LNCaP_no-DHT6216039   
SAGE_Brain_medulloblastoma_B_98-13-P3014534228   
SAGE_Brain_medulloblastoma_B_DL76839238   
SAGE_Brain_normal_thalamus_B_12401518   
SAGE_Lung_tumor_associated_chronic_inflammation_B_UIHM09896248   
SAGE_Prostate_adenocarcinoma_CL_LNCaP2234418   
SAGE_Prostate_carcinoma_B_LN-12259918   
SAGE_Brain_astrocytoma_grade_I_B_H10437592237   
SAGE_Brain_glioblastoma_B_pooled5642827   
SAGE_Brain_medulloblastoma_B_96-04-P0195264527   
SAGE_Brain_medulloblastoma_B_DL58367137   
SAGE_Breast_Normal_Epithelium_CD44+_N6_N481048765387   
SAGE_Embryonic_stem_cell_BG01_normal_p20_CL_SHE1920166887   
SAGE_Embryonic_stem_cell_H1_normal_p31_CL_SHE17276203117   
SAGE_Embryonic_stem_cell_H7_normal_p33_CL_SHE13272465107   
SAGE_Testis_Embryonal_Carcinoma_CL_hs021359354902137   
SAGE_Vascular_normal_CS_control5164227   
SAGE_White_Blood_Cells_monocyte_depleted_mononuclear_cells_normal_AP_A15379527   
SAGE_Brain_astrocytoma_grade_III_B_R14011873346   
SAGE_Brain_glioblastoma_control_CL_H2476042826   
SAGE_Brain_medulloblastoma_B_H4845746926   
SAGE_Breast_carcinoma_B_IDC-56045126   
SAGE_Prostate_adenocarcinoma_MD_PR3176495126   
SAGE_Prostate_normal_B_26405826   
SAGE_White_Blood_Cells_monocytes_normal_AP_A29878636   
SAGE_Brain_astrocytoma_grade_II_B_H51610811635   
SAGE_Brain_glioblastoma_B_H83310060035   
SAGE_Brain_medulloblastoma_B_12733861415   
SAGE_Brain_medulloblastoma_B_C6097461225   
SAGE_Brain_meningioma_grade_I_B_SF42716925325   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIEK03774715   
SAGE_Embryonic_stem_cell_H14_normal_p22_CL_SHE1421217065   
SAGE_Embryonic_stem_cell_HES4_normal_p36_CL_SHE1120923265   
SAGE_Esophagus_Dysplasia_B_HGD027861125   
SAGE_Eye_Retinoblastoma_B_hs0389124342323465   
SAGE_Kidney_carcinoma_B_D210028135   
SAGE_Lung_adenocarcinoma_MD_L93591615   
SAGE_Retinal_Pigment_Epithelium_normal_B_4MacRPE7726225   
SAGE_Thyroid_normal_B_00111593835   
SAGE_Vascular_endothelium_hemangioma_B_1467568025   
SAGE_Brain_ependymoma_B_2394665314   
SAGE_Brain_glioblastoma_B_H13714933814   
SAGE_Brain_glioblastoma_B_R709909924   
SAGE_Brain_glioblastoma_CS_TA24667814   
SAGE_Brain_medulloblastoma_B_98-05-P6084845114   
SAGE_Brain_medulloblastoma_B_98-09-P5588598424   
SAGE_Brain_medulloblastoma_CL_mhh-14785814   
SAGE_Breast_carcinoma_B_DCIS-54309814   
SAGE_Breast_carcinoma_MD_DCIS4078314   
SAGE_Breast_metastatic_carcinoma_B_LN14508714   
SAGE_Colon_adenocarcinoma_B_Tu984137114   
SAGE_Colon_carcinoma_CL_Hct116_wildtype_p53_Normal_Oxygen8039824   
SAGE_Embryonic_stem_cell_H13_normal_p22_CL_SHE1522110154   
SAGE_Embryonic_stem_cell_H1_normal_p54_CL_SHE1621821454   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES240143294   
SAGE_GallBladder_Adenocarcinoma_B_C018138024   
SAGE_Kidney_embryonic_CL_293-control4195514   
SAGE_Liver_cholangiocarcinoma_B_K2D4685314   
SAGE_Ovary_normal_CL_IOSE29EC-114715914   
SAGE_Retina_Retinoblastoma_B_18849024   
SAGE_Bladder_Cancer_B_hs02664244612643   
SAGE_Bone_Marrow_AML_FS_CD34+CD38+6151913   
SAGE_Brain_astrocytoma_grade_III_B_58410300823   
SAGE_Brain_astrocytoma_grade_III_B_H10205157313   
SAGE_Brain_astrocytoma_grade_III_B_H105510988623   
SAGE_Brain_astrocytoma_grade_III_B_H97010698223   
SAGE_Brain_astrocytoma_grade_II_B_H51811602223   
SAGE_Brain_ependymoma_B_13945631413   
SAGE_Brain_ependymoma_B_R5825218913   
SAGE_Brain_medulloblastoma_B_H3066045413   
SAGE_Brain_medulloblastoma_CL_D2836631613   
SAGE_Brain_meningioma_grade_III_B_SF23665978613   
SAGE_Brain_meningioma_grade_I_B_SF44655464713   
SAGE_Breast_Carcinoma_CD24+_C1_IDC314286604703   
SAGE_Breast_carcinoma_CL_MCF7control_0h5987713   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_IDC285795613   
SAGE_Breast_carcinoma_epithelium_PROCR+_AP_IDC295408013   
SAGE_Breast_normal_epithelium_BEREP4+_AP_N25051213   
SAGE_Breast_normal_myoepithelium_CL_HME505551613   
SAGE_Colon_adenocarcinoma_CL_HCT1165564113   
SAGE_Embryonic_stem_cell_HSF6_normal_p50_CL_SHES922448843   
SAGE_Muscle_normal_B_young5394713   
SAGE_Ovary_adenocarcinoma_B_OVT-75351413   
SAGE_Placenta_normal_B_111808323   
SAGE_Prostate_carcinoma_B_pool26603413   
SAGE_Retina_macula_normal_B_HMAC210241723   
SAGE_Skin_Cancer_B_hs027957032981023   
SAGE_Testis_Embyronal_Carcinoma_B_16635213   
SAGE_Vascular_normal_CS_VEGF+5731613   
SAGE_Bone_marrow_normal_AP_CD34+/CD38+/lin+8159512   
SAGE_Brain_Medulloblastoma_CL_UW228-N9493712   
SAGE_Brain_Medulloblastoma_CL_UW228-V28082712   
SAGE_Brain_astrocytoma_grade_II_B_H5638856812   
SAGE_Brain_ependymoma_B_R3537382212   
SAGE_Brain_ependymoma_B_R5127537912   
SAGE_Brain_glioblastoma_B_H1425C8899012   
SAGE_Brain_glioblastoma_CL_H54+LacZ6690812   
SAGE_Brain_glioblastoma_hypoxia_CL_H2477176512   
SAGE_Brain_medulloblastoma_B_97-05-P3127429512   
SAGE_Brain_medulloblastoma_B_H2757231812   
SAGE_Brain_medulloblastoma_B_H8766740412   
SAGE_Brain_normal_peds_cortex_B_H15717755412   
SAGE_Breast_Carcinoma_EPCR+_C6_IDC314208755502   
SAGE_Breast_Normal_Epithelium_CD44+_N5_N471890938202   
SAGE_Breast_carcinoma_B_IDC-36889112   
SAGE_Breast_carcinoma_MD_LCIS6783412   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC87396712   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS67285712   
SAGE_Breast_normal_epithelium_MUC1+_AP_N157170412   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N57617312   
SAGE_Breast_normal_stroma_AP_17915212   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIFK08594412   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES115173522   
SAGE_Esophagus_Dysplasia_B_LGD017490412   
SAGE_Eye_lens_B_UIHI08589812   
SAGE_GallBladder_Adenocarcinoma_B_NAM017854812   
SAGE_Lung_adenocarcinoma_MD_L108688712   
SAGE_Lymph_Node_normal_B_19942612   
SAGE_Ovary_endometriosis_CL_E127609712   
SAGE_Peripheral_Blood_Cancer_B_hs04306399705652   
SAGE_Placenta_first_trimester_normal_B_18926512   
SAGE_Retinal_Pigment_Epithelium_normal_B_4PeriRPE9019912   
SAGE_Uterus_Normal_B_hs01946452623762   
SAGE_Vein_normal_B_hs02306755622792   
SAGE_Bladder_Cancer_B_hs02406216426451   
SAGE_Bladder_Cancer_B_hs02645833968531   
SAGE_Brain_astrocytoma_grade_III_B_40710831211   
SAGE_Brain_astrocytoma_grade_II_B_H12711448911   
SAGE_Brain_astrocytoma_grade_II_B_H35910576411   
SAGE_Brain_astrocytoma_grade_II_B_H50112830911   
SAGE_Brain_ependymoma_B_R102312269011   
SAGE_Brain_ependymoma_B_R62812043111   
SAGE_Brain_fetal_normal_B_S130554621   
SAGE_Brain_glioblastoma_B_H135312480511   
SAGE_Brain_glioblastoma_CL_4d11521211   
SAGE_Breast_Normal_Epithelium_CD24+_N2_N35135842231191   
SAGE_Breast_Normal_Epithelium_CD24+_N3_N473036002201   
SAGE_Breast_Normal_Epithelium_CD44+_N7_N5811007864971   
SAGE_Embryo_Pre-Cancer_B_hs03246893016671   
SAGE_Lymph_node_Lymphoma_B_hs02045178993421   
SAGE_Peripheral_Blood_Cancer_B_hs04295756848341   
SAGE_Retina_Macula_normal_B_4Mac10141711   
SAGE_Retina_normal_B_4cRet10370111   
SAGE_Skin_Melanoma_B_hs02765631800361   
SAGE_Skin_Normal_B_hs02816517089411   
SAGE_Thyroid_follicular_adenoma_B_TT00510157811   
SAGE_Uterus_normal_B_hs01953718463191   
SAGE_Vein_normal_B_hs02376135688351   
SAGE_White_Blood_Cells_monocyte_normal_AP_P110115811   
SAGE_White_Blood_Cells_monocytes_normal_AP_C110165611   
SAGE_Bladder_Cancer_B_hs02413335801160   
SAGE_Bladder_Cancer_B_hs02654640198190   
SAGE_Breast_Carcinoma_CD24+_C2_IDC344720960110   
SAGE_Breast_Carcinoma_CD24+_C3_IDC38411741060   
SAGE_Breast_Carcinoma_CD24+_C4_IDC40357091040   
SAGE_Breast_Carcinoma_EPCR+_C5_IDC27379656870   
SAGE_Breast_Normal_Epithelium_CD24+_N1_N339646880470   
SAGE_Breast_Normal_Epithelium_CD24+_N4_N48180227440   
SAGE_Embryonic_stem_cell_normal_CL_hs02383636083170   
SAGE_Foreskin_normal_B_hs03053940350160   
SAGE_Lymph_node_Lymphoma_B_hs0196479148170   
SAGE_Skin_Cancer_B_hs02803618498100   
SAGE_Skin_Cancer_B_hs0283369223980   
SAGE_Skin_Cancer_B_hs0284389250790   
SAGE_Skin_Melanoma_B_hs0273388177090   
SAGE_Skin_Melanoma_B_hs0274389521140   
SAGE_Skin_Melanoma_B_hs02754128221150   
SAGE_Skin_Normal_B_hs0271580768670   
SAGE_Skin_Normal_B_hs02724397550140   
SAGE_Skin_Normal_B_hs02775269789260   
SAGE_Skin_Normal_B_hs0278304222140   
SAGE_Skin_Normal_B_hs0282441163690   
SAGE_Testis_Embryonal_Carcinoma_CL_hs02126370161210   
SAGE_Urothelium_normal_B_hs02393114307120