Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
SAGE Genie
  • Human SAGE Genie Tools
  • Downloads
  • Digital Karyotyping
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Digital Northern Results

Search query: TCCTGGCTCT

Color Code                              
Tags per 200,000 <2 <4 <8 <16 <32 <64 <128 <256 <512 >512

LibraryTotal Tags
in Library
Tag CountsTags per
200,000
Color
Code
SAGE_Pancreas_normal_CS_HX31985425   
SAGE_Breast_normal_epithelium_MUC1+_AP_N1571704822   
SAGE_Breast_normal_epithelium_CD44+_AP_N580464819   
SAGE_Breast_normal_myoepithelium_CD10+_AP_IDC769006617   
SAGE_Breast_carcinoma_associated_stroma_B_DCIS657049414   
SAGE_Breast_carcinoma_epithelium_PROCR+_AP_IDC2954080414   
SAGE_Breast_normal_epithelium_CD24+_AP_N241551314   
SAGE_Brain_astrocytoma_grade_III_B_584103008713   
SAGE_Breast_normal_epithelium_CD24+_AP_N576469513   
SAGE_Breast_carcinoma_CL_ZR75_1_untreated32303212   
SAGE_Breast_carcinoma_epithelium_PROCR+_AP_IDC2852781311   
SAGE_Peritoneum_normal_B_1353527311   
SAGE_Brain_glioblastoma_CL_H54+EGFRvIII56982310   
SAGE_Breast_Normal_Epithelium_CD44+_N5_N4718909389510   
SAGE_Breast_normal_epithelium_CD44+_AP_N256008310   
SAGE_Breast_normal_organoid_B58181310   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIEK037747210   
SAGE_Brain_medulloblastoma_B_98-04-P4944306829   
SAGE_Breast_normal_epithelium_CD24+_AP_N154143029   
SAGE_Testis_Embyronal_Carcinoma_B_16635239   
SAGE_Brain_ependymoma_B_R102312269058   
SAGE_Breast_Normal_Epithelium_CD44+_N6_N481048765478   
SAGE_Brain_Medulloblastoma_CL_UW228-V28082737   
SAGE_Brain_ependymoma_B_R5108407337   
SAGE_Breast_normal_myoepithelium_CL_HME505551627   
SAGE_Breast_normal_stroma_B_IDC85048527   
SAGE_Colon_adenocarcinoma_CL_HCT1165564127   
SAGE_Colon_adenocarcinoma_CL_RKO5129427   
SAGE_Heart_normal_B_18306337   
SAGE_Vascular_endothelium_hemangioma_B_1467568037   
SAGE_Brain_fetal_normal_B_S1305546106   
SAGE_Brain_medulloblastoma_B_H13225949826   
SAGE_Breast_Normal_Epithelium_CD24+_N3_N4730360021016   
SAGE_Breast_Normal_Epithelium_CD24+_N4_N481802274576   
SAGE_Breast_Normal_Epithelium_CD44+_N7_N58110078643536   
SAGE_Breast_carcinoma_B_DCIS-46060526   
SAGE_Breast_phyllodes_tumor_fibroblasts_AP_0702025957526   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIFK08594436   
SAGE_Colon_adenocarcinoma_CL_Caco26068226   
SAGE_Liver_normal_B_16630826   
SAGE_Lung_normal_B_18870836   
SAGE_Lung_normal_CL_L162898316   
SAGE_Lung_tumor_associated_chronic_inflammation_B_UIHM09896236   
SAGE_Pancreas_carcinoma_CL_ASPC3122416   
SAGE_Pancreas_carcinoma_CL_PL452955716   
SAGE_Pancreas_normal_CS_H1263222316   
SAGE_White_Blood_Cells_breast_carcinoma_associated_CD45+_AP_DCIS66617626   
SAGE_White_Blood_Cells_normal_breast_associated_CD45+_AP3198516   
SAGE_Brain_astrocytoma_grade_II_B_H38810628535   
SAGE_Brain_astrocytoma_grade_II_B_H51811602235   
SAGE_Brain_glioblastoma_CL_stem_cells10841435   
SAGE_Brain_medulloblastoma_B_97-05-P0156997125   
SAGE_Breast_carcinoma_associated_stroma_B_IDC76802425   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_IDC263936115   
SAGE_Breast_carcinoma_epithelium_X_MUC1+_AP7514725   
SAGE_Breast_normal_epithelium_MUC1+_AP_N57622725   
SAGE_Lung_adenocarcinoma_MD_L93591615   
SAGE_Lymph_node_Lymphoma_B_hs020451789931555   
SAGE_Pancreas_adenocarcinoma_B_91-161133358215   
SAGE_Prostate_carcinoma_CL_PC3_Mock3881915   
SAGE_Retina_Macula_normal_B_4Mac10141735   
SAGE_White_Blood_Cells_breast_carcinoma_associated_CD45+_AP_IDC73439915   
SAGE_Brain_Medulloblastoma_CL_425Otx2siRNA9729124   
SAGE_Brain_astrocytoma_grade_III_B_8289993924   
SAGE_Brain_astrocytoma_grade_II_B_H5638856824   
SAGE_Brain_ependymoma_B_R62812043134   
SAGE_Brain_medulloblastoma_B_98-05-P6084845114   
SAGE_Brain_medulloblastoma_B_98-13-P3014534214   
SAGE_Brain_medulloblastoma_CL_mhh-14785814   
SAGE_Brain_meningioma_grade_II_B_SF21764871114   
SAGE_Brain_normal_cerebellum_B_BB5424050014   
SAGE_Brain_normal_cortex_B_BB5429423324   
SAGE_Brain_normal_substantia_nigra_B_14177314   
SAGE_Breast_Carcinoma_EPCR+_C5_IDC273796568934   
SAGE_Breast_carcinoma_CL_MDA435H244663114   
SAGE_Breast_carcinoma_metastasis_B_24979414   
SAGE_Breast_normal_epithelium_BEREP4+_AP_N14872914   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGX08843924   
SAGE_Colon_adenocarcinoma_B_Tu984137114   
SAGE_Colon_normal_B_NC14961014   
SAGE_Embryonic_stem_cell_H1_normal_p54_CL_SHE1621821454   
SAGE_Eye_lens_B_UIHI08589824   
SAGE_GallBladder_Normal_B_HN8570624   
SAGE_Leukocytes_normal_B_14787314   
SAGE_Liver_cholangiocarcinoma_B_K2D4685314   
SAGE_Lymph_Node_normal_B_19942624   
SAGE_Ovary_normal_CL_IOSE29EC-114715914   
SAGE_Prostate_carcinoma_CL_PC3_AS24076814   
SAGE_Skin_melanoma_B_DB24133814   
SAGE_Stomach_adenocarcinoma_MD_G3294680214   
SAGE_Bone_Marrow_AML_FS_CD34+CD38+6151913   
SAGE_Brain_astrocyte_normal_CL_NHA55148113   
SAGE_Brain_astrocytoma_grade_III_B_34310015823   
SAGE_Brain_astrocytoma_grade_III_B_40710831223   
SAGE_Brain_astrocytoma_grade_III_B_H105510988623   
SAGE_Brain_astrocytoma_grade_II_B_H53010243923   
SAGE_Brain_ependymoma_B_13945631413   
SAGE_Brain_ependymoma_B_R5825218913   
SAGE_Brain_glioblastoma_CL_H3925599013   
SAGE_Brain_medulloblastoma_B_96-04-P0195264513   
SAGE_Brain_medulloblastoma_B_H3066045413   
SAGE_Brain_medulloblastoma_CL_4-HCR6659913   
SAGE_Brain_normal_cortex_B_pool66245113   
SAGE_Breast_Carcinoma_CD24+_C3_IDC384117410683   
SAGE_Breast_carcinoma_B_IDC-56045113   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC76509113   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC96353913   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS-26616813   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_IDC285795613   
SAGE_Breast_carcinoma_epithelium_CD44+_AP_ASC35247813   
SAGE_Breast_normal_B_gestational hyperplasia16170413   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N15722213   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N156399413   
SAGE_Colon_adenocarcinoma_B_Tu1025570013   
SAGE_Embryonic_stem_cell_H7_normal_p33_CL_SHE1327246553   
SAGE_Muscle_normal_B_young5394713   
SAGE_Placenta_hydatidiform_mole_B_110167723   
SAGE_Prostate_adenocarcinoma_MD_PR3176495113   
SAGE_Prostate_carcinoma_B_pool26603413   
SAGE_Retina_Peripheral_normal_B_210531223   
SAGE_Spinal_cord_normal_B_15478513   
SAGE_Stomach_adenocarcinoma_B_G2346492513   
SAGE_Thyroid_normal_B_00111593823   
SAGE_Universal_reference_human_RNA_CL5172913   
SAGE_White_Blood_Cells_lung_macrophage_normal_AP_L15187213   
SAGE_Brain_astrocytoma_grade_III_B_H2729605912   
SAGE_Brain_astrocytoma_grade_I_B_H10437592212   
SAGE_Brain_ependymoma_B_R3537382212   
SAGE_Brain_ependymoma_B_R5127537912   
SAGE_Brain_glioblastoma_B_H11106898612   
SAGE_Brain_glioblastoma_B_H1425C8899012   
SAGE_Brain_glioblastoma_B_R709909912   
SAGE_Brain_medulloblastoma_B_98-05-P0408925812   
SAGE_Brain_medulloblastoma_B_98-09-P5588598412   
SAGE_Brain_medulloblastoma_B_DL58367112   
SAGE_Breast_Carcinoma_CD24+_C2_IDC344720960582   
SAGE_Breast_Carcinoma_SSEA4+_C7_IDC403381240342   
SAGE_Breast_Normal_Epithelium_CD24+_N1_N3396468801412   
SAGE_Breast_Normal_Epithelium_CD24+_N2_N35135842231922   
SAGE_Breast_carcinoma_MD_LCIS6783412   
SAGE_Breast_carcinoma_associated_myoepithelium_CD10+_AP_DCIS68145212   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC87396712   
SAGE_Breast_carcinoma_myoepithelium_X_ITGB6+_AP7878512   
SAGE_Cartilage_chondrosarcoma_grade_2_B_UIGA09384612   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Anoxia7905312   
SAGE_Colon_carcinoma_CL_Hct116_wildtype_p53_Anoxia7901512   
SAGE_Colon_carcinoma_CL_Hct116_wildtype_p53_Normal_Oxygen8039812   
SAGE_Embryonic_stem_cell_H1_normal_p31_CL_SHE1727620342   
SAGE_Lung_adenocarcinoma_MD_L108688712   
SAGE_Lymph_Node_Lymphoma_B_17200812   
SAGE_Stomach_carcinoma_B_xenograft_X1016974912   
SAGE_Vascular_endothelium_normal_liver_associated_AP_NLEC17775912   
SAGE_White_Blood_Cells_monocyte_normal_AP_A19991312   
SAGE_Bone_Marrow_Cancer_FS_hs04054900037371   
SAGE_Bone_Marrow_Normal_FS_hs04044842547261   
SAGE_Brain_astrocytoma_grade_III_B_H97010698211   
SAGE_Brain_astrocytoma_grade_III_B_R14011873311   
SAGE_Brain_astrocytoma_grade_III_B_R92710734411   
SAGE_Brain_astrocytoma_grade_II_B_H12711448911   
SAGE_Brain_astrocytoma_grade_II_B_H50112830911   
SAGE_Brain_astrocytoma_grade_II_B_H51610811611   
SAGE_Brain_glioblastoma_B_H135312480511   
SAGE_Brain_glioblastoma_B_H83310060011   
SAGE_Brain_glioblastoma_B_R2010105311   
SAGE_Brain_glioblastoma_CL_4d11521211   
SAGE_Breast_Carcinoma_CD24+_C1_IDC314286604221   
SAGE_Breast_Carcinoma_CD24+_C4_IDC403570910191   
SAGE_Embryonic_stem_cell_H14_normal_p22_CL_SHE1421217021   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES240143231   
SAGE_Embryonic_stem_cell_HSF6_normal_p50_CL_SHES922448821   
SAGE_Placenta_normal_B_111808311   
SAGE_Retina_Peripheral_normal_B_4Peri12669111   
SAGE_Retina_normal_B_4cRet10370111   
SAGE_Skin_Cancer_B_hs02795703298401   
SAGE_Skin_Melanoma_B_hs02743895211281   
SAGE_Skin_Melanoma_B_hs02765631800341   
SAGE_Skin_Normal_B_hs02824411636281   
SAGE_Testis_Embryonal_Carcinoma_CL_hs02135935490311   
SAGE_Thyroid_follicular_carcinoma_B_TT00412466411   
SAGE_Uterus_Normal_B_hs01946452623391   
SAGE_White_Blood_Cells_monocytes_normal_AP_C110165611   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P110287311   
SAGE_Bladder_Cancer_B_hs0240621642630   
SAGE_Bladder_Cancer_B_hs0264583396840   
SAGE_Bladder_Cancer_B_hs02654640198110   
SAGE_Bladder_Cancer_B_hs0266424461280   
SAGE_Breast_Carcinoma_EPCR+_C6_IDC314208755130   
SAGE_Embryo_Pre-Cancer_B_hs03246893016150   
SAGE_Embryonic_stem_cell_HES3_normal_p16_CL_SHE1020535310   
SAGE_Embryonic_stem_cell_normal_CL_hs0238363608340   
SAGE_Eye_Retinoblastoma_B_hs038912434232480   
SAGE_Foreskin_normal_B_hs0305394035070   
SAGE_Lymph_node_Lymphoma_B_hs0196479148140   
SAGE_Peripheral_Blood_Cancer_B_hs04295756848140   
SAGE_Peripheral_Blood_Cancer_B_hs04306399705240   
SAGE_Skin_Cancer_B_hs0280361849870   
SAGE_Skin_Cancer_B_hs0283369223920   
SAGE_Skin_Cancer_B_hs0284389250720   
SAGE_Skin_Melanoma_B_hs0273388177040   
SAGE_Skin_Melanoma_B_hs0275412822180   
SAGE_Skin_Normal_B_hs02715807686150   
SAGE_Skin_Normal_B_hs02724397550190   
SAGE_Skin_Normal_B_hs0277526978970   
SAGE_Skin_Normal_B_hs02816517089200   
SAGE_Testis_Embryonal_Carcinoma_CL_hs02126370161140   
SAGE_Urothelium_normal_B_hs0239311430740   
SAGE_Uterus_normal_B_hs01953718463150   
SAGE_Vein_normal_B_hs02306755622310   
SAGE_Vein_normal_B_hs02376135688280