Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
SAGE Genie
  • Human SAGE Genie Tools
  • Downloads
  • Digital Karyotyping
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Digital Northern Results

Search query: TATTTTCTTT

Color Code                              
Tags per 200,000 <2 <4 <8 <16 <32 <64 <128 <256 <512 >512

LibraryTotal Tags
in Library
Tag CountsTags per
200,000
Color
Code
SAGE_Breast_carcinoma_epithelium_CD44+_AP_ASC35247830114   
SAGE_Rheumatoid_arthritis_synovial_fibroblast_CS4247222103   
SAGE_Breast_carcinoma_associated_stroma_B_DCIS6570492277   
SAGE_Breast_normal_epithelium_CD24+_AP_N2415511677   
SAGE_Breast_normal_myoepithelium_CD10+_AP_IDC7690062572   
SAGE_Peritoneum_mesothelioma_B_12325291167   
SAGE_Vein_normal_B_hs02376135688195663   
SAGE_Brain_glioblastoma_B_H1110689861955   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_IDC26393611155   
SAGE_Brain_Medulloblastoma_CL_425C2626421754   
SAGE_Brain_glioblastoma_B_H13531248053454   
SAGE_Brain_glioblastoma_B_R70990992754   
SAGE_Placenta_normal_B_11180833254   
SAGE_Brain_ependymoma_B_R512753792053   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC9635391753   
SAGE_Brain_glioblastoma_CS_TA2466781251   
SAGE_Embryonic_stem_cell_H1_normal_p31_CL_SHE172762037151   
SAGE_Testis_Embryonal_Carcinoma_CL_hs02126370161164551   
SAGE_Brain_astrocytoma_grade_III_B_R1401187333050   
SAGE_Skin_Melanoma_B_hs02754128221103149   
SAGE_Brain_Medulloblastoma_CL_UW228-N949372348   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES24014329547   
SAGE_Breast_Carcinoma_CD24+_C2_IDC344720960108946   
SAGE_Embryo_Pre-Cancer_B_hs03246893016156345   
SAGE_Breast_Carcinoma_SSEA4+_C7_IDC40338124076044   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N5761731744   
SAGE_Brain_ependymoblastoma_B_81933975741   
SAGE_Brain_ependymoma_B_R353738221540   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGD01098622240   
SAGE_Embryonic_stem_cell_HES4_normal_p36_CL_SHE112092324240   
SAGE_Retina_Retinoblastoma_B_1884901840   
SAGE_Brain_Medulloblastoma_CL_425Otx2siRNA972911939   
SAGE_Brain_glioblastoma_CL_28d1106242239   
SAGE_Embryonic_stem_cell_H1_normal_p54_CL_SHE162182144339   
SAGE_Ovary_cystadenoma_CL_ML10-10551441139   
SAGE_Vascular_endothelium_hemangioma_B_146756801539   
SAGE_Breast_carcinoma_associated_stroma_B_IDC7680241338   
SAGE_Brain_astrocytoma_grade_II_B_H3591057642037   
SAGE_Breast_Normal_Epithelium_CD44+_N7_N5811007864209137   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N15639941237   
SAGE_Embryonic_stem_cell_H14_normal_p22_CL_SHE142121704037   
SAGE_Embryonic_stem_cell_H7_normal_p33_CL_SHE132724655137   
SAGE_Embryonic_stem_cell_HES3_normal_p16_CL_SHE102053533937   
SAGE_Ovary_normal_CS_HOSE_447728937   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC9659351236   
SAGE_Embryonic_stem_cell_normal_CL_hs0238363608367036   
SAGE_Brain_glioblastoma_B_H8331006001835   
SAGE_Breast_normal_epithelium_CD44+_AP_N2560081035   
SAGE_Breast_carcinoma_epithelium_PROCR+_AP_IDC2852781934   
SAGE_Universal_reference_human_RNA_CL51729934   
SAGE_Uterus_normal_B_hs0195371846363734   
SAGE_Brain_glioblastoma_B_H1425C889901533   
SAGE_Thyroid_follicular_carcinoma_B_TT0041246642133   
SAGE_Lymph_node_Lymphoma_B_hs0204517899383332   
SAGE_Brain_astrocyte_normal_CL_NHA551481831   
SAGE_Brain_astrocytoma_grade_III_B_H272960591531   
SAGE_Lung_normal_B_1887081431   
SAGE_Brain_medulloblastoma_B_H132259498930   
SAGE_Breast_carcinoma_CL_MDA435H2446631730   
SAGE_Breast_normal_organoid_B58181930   
SAGE_Embryonic_stem_cell_BG01_normal_p20_CL_SHE192016683130   
SAGE_Brain_Medulloblastoma_CL_UW228-V2808271229   
SAGE_Brain_astrocytoma_grade_III_B_R9271073441629   
SAGE_Brain_normal_cerebellum_B_BB54240500629   
SAGE_Liver_cholangiocarcinoma_CL_K354842829   
SAGE_Brain_ependymoma_B_139456314828   
SAGE_Heart_normal_B_1830631228   
SAGE_Vein_normal_B_hs0230675562297828   
SAGE_Brain_astrocytoma_grade_III_B_3431001581427   
SAGE_Brain_fetal_normal_B_S13055464227   
SAGE_Breast_Carcinoma_CD24+_C4_IDC40357091049527   
SAGE_Breast_normal_stroma_B_IDC850485727   
SAGE_Brain_astrocytoma_grade_III_B_828999391326   
SAGE_Brain_astrocytoma_grade_III_B_H9701069821426   
SAGE_Brain_glioblastoma_CL_4d1152121526   
SAGE_Brain_glioblastoma_control_CL_H24760428826   
SAGE_Breast_carcinoma_epithelium_CD44+_AP_PE252342726   
SAGE_Embryonic_stem_cell_H13_normal_p22_CL_SHE152211012926   
SAGE_Placenta_first_trimester_normal_B_1892651226   
SAGE_Skin_Normal_B_hs0272439755059226   
SAGE_Brain_ependymoma_B_115062373825   
SAGE_Brain_ependymoma_B_23946653625   
SAGE_Breast_normal_myoepithelium_CL_HME5055516725   
SAGE_GallBladder_Normal_B_HN857061125   
SAGE_Liver_cholangiocarcinoma_B_K2D46853625   
SAGE_Placenta_hydatidiform_mole_B_11016771325   
SAGE_Retinal_Pigment_Epithelium_normal_B_4MacRPE772621025   
SAGE_Brain_medulloblastoma_B_H48457469724   
SAGE_Breast_carcinoma_CL_MDA435H4840323524   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC866520824   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_IDC2857956724   
SAGE_Breast_carcinoma_metastasis_B_249794624   
SAGE_Breast_normal_epithelium_CD24+_AP_N1541430524   
SAGE_Retinal_Pigment_Epithelium_normal_B_4PeriRPE901991124   
SAGE_Breast_carcinoma_B_DCIS-460605723   
SAGE_Breast_carcinoma_MD_LCIS67834823   
SAGE_Breast_normal_epithelium_CD24+_AP_N576469923   
SAGE_Skin_Cancer_B_hs0283369223943923   
SAGE_Vascular_endothelium_normal_liver_associated_AP_NLEC177759923   
SAGE_Bladder_Cancer_B_hs0264583396866622   
SAGE_Brain_astrocytoma_grade_II_B_H1271144891322   
SAGE_Skin_Melanoma_B_hs0273388177043022   
SAGE_Testis_Embryonal_Carcinoma_CL_hs0213593549068222   
SAGE_Brain_astrocytoma_grade_II_B_H5011283091421   
SAGE_Brain_ependymoma_B_R51084073921   
SAGE_Brain_glioblastoma_B_R201010531121   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC765091721   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC873967821   
SAGE_Breast_carcinoma_epithelium_BerEP4+AP_IDC773410821   
SAGE_Breast_carcinoma_epithelium_X_MUC1+_AP75147821   
SAGE_Breast_fibroadenoma_MD55688621   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIEK037747421   
SAGE_Embryonic_stem_cell_HSF6_normal_p50_CL_SHES92244882421   
SAGE_Skin_Melanoma_B_hs0274389521141621   
SAGE_Spinal_cord_normal_B_154785621   
SAGE_Brain_astrocytoma_grade_III_B_4071083121120   
SAGE_Brain_astrocytoma_grade_III_B_H10551098861120   
SAGE_Brain_astrocytoma_grade_II_B_H3881062851120   
SAGE_Brain_astrocytoma_grade_II_B_H5161081161120   
SAGE_Brain_astrocytoma_grade_II_B_H5181160221220   
SAGE_Brain_ependymoma_B_H58068614720   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N157222620   
SAGE_Breast_phyllodes_tumor_fibroblasts_AP_07020259575620   
SAGE_Uterus_Normal_B_hs0194645262367320   
SAGE_Breast_normal_epithelium_MUC1+_AP_N1571704719   
SAGE_Eye_Retinoblastoma_B_hs038912434232124019   
SAGE_Vascular_normal_CS_control51642519   
SAGE_White_Blood_Cells_monocyte_depleted_mononuclear_cells_normal_AP_P151634519   
SAGE_Brain_astrocytoma_grade_III_B_4391078241018   
SAGE_Brain_glioblastoma_CL_stem_cells1084141018   
SAGE_Brain_medulloblastoma_B_C60974612718   
SAGE_Breast_carcinoma_epithelium_PROCR+_AP_IDC2954080518   
SAGE_Cartilage_chondrosarcoma_grade_2_CL_UIFU075019718   
SAGE_Brain_medulloblastoma_B_98-13-P30145342417   
SAGE_Brain_medulloblastoma_B_H87667404617   
SAGE_Breast_carcinoma_B_IDC-368891617   
SAGE_GallBladder_Adenocarcinoma_B_NAM0178548717   
SAGE_White_Blood_Cells_breast_carcinoma_associated_CD45+_AP_IDC734399317   
SAGE_Bone_Marrow_AML_FS_CD34+CD38+61519516   
SAGE_Brain_glioblastoma_hypoxia_CL_H24771765616   
SAGE_Breast_Carcinoma_EPCR+_C5_IDC27379656830416   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGP0108319916   
SAGE_Brain_astrocytoma_grade_II_B_H56388568715   
SAGE_Brain_medulloblastoma_B_96-04-P01952645415   
SAGE_Breast_normal_epithelium_MUC1+_AP_N576227615   
SAGE_Breast_normal_stroma_AP_179152615   
SAGE_Liver_cholangiocarcinoma_CL_K452973415   
SAGE_Lymph_node_Lymphoma_B_hs0196479148137915   
SAGE_Retina_Peripheral_normal_B_2105312815   
SAGE_Skin_Normal_B_hs0277526978940715   
SAGE_Thyroid_follicular_adenoma_B_TT005101578815   
SAGE_Vascular_endothelium_breast_carcinoma_associated_P1H12+_AP_DCIS665314515   
SAGE_White_Blood_Cells_lung_macrophage_normal_AP_L151872415   
SAGE_Brain_ependymoma_B_R1023122690914   
SAGE_Breast_normal_epithelium_CD44+_AP_N580464614   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES11517351114   
SAGE_GallBladder_Adenocarcinoma_B_C0181380614   
SAGE_Lymph_Node_normal_B_199426714   
SAGE_Ovary_adenocarcinoma_B_OVT-641443314   
SAGE_Skin_Normal_B_hs0271580768642614   
SAGE_White_Blood_Cells_monocyte_depleted_mononuclear_cells_normal_AP_A153795414   
SAGE_Bladder_Cancer_B_hs0265464019832213   
SAGE_Brain_medulloblastoma_B_98-04-P49443068313   
SAGE_Lymph_Node_Lymphoma_B_172008513   
SAGE_Muscle_Rhabdomyosarcoma_B_161270413   
SAGE_Retina_Macula_normal_B_4Mac101417713   
SAGE_Retina_Peripheral_normal_B_159661413   
SAGE_Skin_Cancer_B_hs0279570329837313   
SAGE_Skin_Cancer_B_hs0280361849825213   
SAGE_Brain_glioblastoma_B_H137149338312   
SAGE_Brain_medulloblastoma_CL_D28366316412   
SAGE_Breast_Carcinoma_CD24+_C1_IDC31428660426112   
SAGE_Breast_Carcinoma_EPCR+_C6_IDC31420875526012   
SAGE_Ovary_normal_CL_IOSE29EC-1147159312   
SAGE_Pancreas_carcinoma_CL_ASPC31224212   
SAGE_Retina_Peripheral_normal_B_4Peri126691812   
SAGE_Thyroid_normal_B_001115938712   
SAGE_Bone_Marrow_Normal_FS_hs0404484254728611   
SAGE_Brain_astrocytoma_grade_II_B_H530102439611   
SAGE_Brain_glioblastoma_B_R336102322611   
SAGE_Breast_Carcinoma_CD24+_C3_IDC38411741023611   
SAGE_Breast_Normal_Epithelium_CD44+_N5_N47189093811311   
SAGE_Breast_Normal_Epithelium_CD44+_N6_N4810487655811   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_PE250132311   
SAGE_Colon_adenocarcinoma_CL_RKO51294311   
SAGE_GallBladder_Adenocarcinoma_B_HAIIb66988411   
SAGE_Lung_adenocarcinoma_B_136256211   
SAGE_Peripheral_Blood_Cancer_B_hs0429575684832311   
SAGE_Peritoneum_normal_B_1353527311   
SAGE_Skin_Normal_B_hs0278304222117411   
SAGE_White_Blood_Cells_monocytes_normal_AP_C1101656611   
SAGE_White_Blood_Cells_monocytes_normal_AP_P254426311   
SAGE_Brain_glioblastoma_B_pooled56428310   
SAGE_Brain_glioblastoma_CL_H54+EGFRvIII56982310   
SAGE_Breast_carcinoma_myoepithelium_X_ITGB6+_AP78785410   
SAGE_Pancreas_adenocarcinoma_CL_CAPAN137674210   
SAGE_Peripheral_Blood_Cancer_B_hs0430639970534110   
SAGE_Prostate_normal_MD_PR31759277310   
SAGE_Skin_Cancer_B_hs0284389250720110   
SAGE_White_Blood_Cells_monocyte_normal_AP_A199913510   
SAGE_Brain_astrocytoma_grade_III_B_58410300859   
SAGE_Brain_medulloblastoma_B_H3066045439   
SAGE_Brain_medulloblastoma_CL_4-HCR6659939   
SAGE_Breast_carcinoma_B_CT15_IDC2184019   
SAGE_Breast_carcinoma_B_IDC-46409539   
SAGE_Breast_carcinoma_B_IDC-56045139   
SAGE_Breast_carcinoma_associated_myoepithelium_CD10+_AP_DCIS68145249   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIFK08594449   
SAGE_Fibroblasts_CL_postcrisis2183319   
SAGE_Liver_normal_B_16630839   
SAGE_Stomach_carcinoma_B_G1896307539   
SAGE_Testis_Embyronal_Carcinoma_B_16635239   
SAGE_Uterus_endometrium_normal_CS_DI12199119   
SAGE_Bladder_Cancer_B_hs024133358011408   
SAGE_Brain_glioblastoma_CL_H54+LacZ6690838   
SAGE_Brain_medulloblastoma_B_97-05-P0156997138   
SAGE_Brain_medulloblastoma_B_98-05-P0408925848   
SAGE_Brain_medulloblastoma_B_98-05-P6084845128   
SAGE_Brain_medulloblastoma_B_H2757231838   
SAGE_Brain_meningioma_grade_II_B_SF21764871128   
SAGE_Brain_meningioma_grade_II_B_SF36224485728   
SAGE_Breast_carcinoma_CL_MDA435C4727028   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS67285738   
SAGE_Breast_normal_epithelium_BEREP4+_AP_N14872928   
SAGE_Foreskin_normal_B_hs030539403501588   
SAGE_Kidney_embryonic_CL_293+beta-catenin2351918   
SAGE_Stomach_adenocarcinoma_MD_G3294680228   
SAGE_Stomach_normal_epithelium_B_body12476118   
SAGE_White_Blood_Cells_monocytes_normal_AP_A29878648   
SAGE_Brain_ependymoma_B_R4555182527   
SAGE_Brain_ependymoma_B_R5825218927   
SAGE_Brain_meningioma_grade_I_B_SF44655464727   
SAGE_Brain_oligodendroglioma_B_H9882786417   
SAGE_Cartilage_chondrosarcoma_grade_2_CL_UIGE07775737   
SAGE_Muscle_normal_B_old5388927   
SAGE_Ovary_endometriosis_CL_E127609737   
SAGE_Retina_normal_B_4cRet10370147   
SAGE_Skin_Melanoma_B_hs027656318002137   
SAGE_Vascular_endothelium_normal_breast_associated_P1H12+_AP_15702327   
SAGE_Brain_medulloblastoma_B_98-04-P1173257016   
SAGE_Brain_medulloblastoma_B_98-09-P5588598436   
SAGE_Brain_oligodendroglioma_B_10013244216   
SAGE_Breast_carcinoma_CL_MCF7estradiol_3h6016226   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS-35740226   
SAGE_Breast_metastatic_carcinoma_B_LN26034326   
SAGE_Prostate_adenocarcinoma_MD_PR3176495126   
SAGE_Prostate_normal_B_26405826   
SAGE_Stomach_adenocarcinoma_B_G2346492526   
SAGE_Urothelium_normal_B_hs02393114307966   
SAGE_Bone_Marrow_Cancer_FS_hs040549000371345   
SAGE_Brain_medulloblastoma_B_12733861415   
SAGE_Brain_meningioma_grade_I_B_SF42716925325   
SAGE_Brain_normal_leptomeninges_B_AL27247325   
SAGE_Breast_Normal_Epithelium_CD24+_N3_N473036002895   
SAGE_Breast_normal_FS_NER3456515   
SAGE_Lung_adenocarcinoma_MD_L93591615   
SAGE_Prostate_carcinoma_CL_PC3_Mock3881915   
SAGE_Prostate_normal_epithelium_CS_senescent7171725   
SAGE_Skin_normal_B_NS3661515   
SAGE_White_Blood_Cells_monocyte_normal_AP_P110115835   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P110287335   
SAGE_Brain_ependymoma_B_R62812043134   
SAGE_Brain_medulloblastoma_B_DL58367124   
SAGE_Brain_medulloblastoma_CL_H3414392014   
SAGE_Brain_medulloblastoma_CL_mhh-14785814   
SAGE_Brain_normal_cortex_B_BB5429423324   
SAGE_Brain_normal_substantia_nigra_B_14177314   
SAGE_Breast_carcinoma_MD_DCIS4078314   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS78918424   
SAGE_Colon_carcinoma_CL_Hct116_wildtype_p53_Normal_Oxygen8039824   
SAGE_Kidney_Glomeruli_Normal_B_bjballer14890514   
SAGE_Kidney_embryonic_CL_293-control4195514   
SAGE_Leukocytes_normal_B_14787314   
SAGE_Lung_adenocarcinoma_MD_L108688724   
SAGE_Prostate_carcinoma_CL_PC3_AS24076814   
SAGE_Stomach_normal_MD_13S4590814   
SAGE_Bladder_Cancer_B_hs024062164261113   
SAGE_Bladder_Cancer_B_hs02664244612713   
SAGE_Brain_medulloblastoma_B_H14136185313   
SAGE_Brain_normal_cerebellum_B_15038513   
SAGE_Breast_Normal_Epithelium_CD24+_N4_N481802274303   
SAGE_Breast_carcinoma_CL_MCF7control_0h5987713   
SAGE_Breast_normal_B_gestational hyperplasia16170413   
SAGE_Breast_normal_epithelium_BEREP4+_AP_N25051213   
SAGE_Colon_adenocarcinoma_CL_SW8376114813   
SAGE_Kidney_carcinoma_B_D210028123   
SAGE_Prostate_carcinoma_CL_LNCaP6025013   
SAGE_Retina_macula_normal_B_HMAC210241723   
SAGE_Skin_Normal_B_hs028165170891253   
SAGE_Stomach_carcinoma_B_xenograph_X435162013   
SAGE_Vascular_normal_CS_VEGF+5731613   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P25029713   
SAGE_Bone_marrow_normal_AP_CD34+/CD38+/lin+8159512   
SAGE_Brain_astrocytoma_grade_I_B_H10437592212   
SAGE_Brain_medulloblastoma_B_97-05-P3127429512   
SAGE_Brain_medulloblastoma_B_H9728537612   
SAGE_Brain_normal_peds_cortex_B_H15717755412   
SAGE_Breast_carcinoma_B_95-3476707012   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGX08843912   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Anoxia7905312   
SAGE_Colon_carcinoma_CL_Hct116_wildtype_p53_Anoxia7901512   
SAGE_Esophagus_Adenocarcinoma_B_CA1D7379312   
SAGE_Esophagus_Dysplasia_B_HGD027861112   
SAGE_Esophagus_Dysplasia_B_LGD017490412   
SAGE_Eye_lens_B_UIHI08589812   
SAGE_Lung_tumor_associated_chronic_inflammation_B_UIHM09896212   
SAGE_Prostate_normal_epithelium_CS_confluent7189712   
SAGE_Stomach_adenocarcinoma_MD_HG79371412   
SAGE_Stomach_normal_MD_14S7335312   
SAGE_Skin_Normal_B_hs02824411636281   
SAGE_Breast_Normal_Epithelium_CD24+_N1_N339646880270   
SAGE_Breast_Normal_Epithelium_CD24+_N2_N3513584223350