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Cancer Genome Characterization Initiative

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SAGE_Prostate_adenocarcinoma_CL_LNCaP22344435   
SAGE_Brain_medulloblastoma_B_DL5836711228   
SAGE_Breast_carcinoma_B_DCIS-460605826   
SAGE_Breast_metastatic_carcinoma_B_LN145087626   
SAGE_Retina_Peripheral_normal_B_21053121426   
SAGE_Brain_medulloblastoma_B_127338614525   
SAGE_Kidney_embryonic_CL_293+beta-catenin23519325   
SAGE_Brain_normal_cerebellum_B_BB54240500524   
SAGE_Breast_carcinoma_metastasis_B_249794624   
SAGE_Brain_medulloblastoma_B_98-04-P49443068523   
SAGE_Brain_medulloblastoma_B_98-09-P558859841023   
SAGE_Retina_macula_normal_B_HMAC21024171223   
SAGE_Brain_medulloblastoma_B_H27572318822   
SAGE_Breast_carcinoma_CL_MDA435C47270521   
SAGE_Stomach_adenocarcinoma_MD_G32946802521   
SAGE_Breast_metastatic_carcinoma_B_LN260343619   
SAGE_Prostate_carcinoma_CL_LNCaP60250619   
SAGE_Stomach_carcinoma_B_G18963075619   
SAGE_Universal_reference_human_RNA_CL51729519   
SAGE_Brain_normal_peds_cortex_B_H157177554718   
SAGE_Fibroblasts_CL_postcrisis21833218   
SAGE_Ovary_carcinoma_CL_A278021369218   
SAGE_Brain_medulloblastoma_B_98-13-P30145342417   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES11517351317   
SAGE_Brain_glioblastoma_control_CL_H24760428516   
SAGE_Brain_Medulloblastoma_CL_425C262642515   
SAGE_Brain_astrocytoma_grade_III_B_584103008815   
SAGE_Brain_astrocytoma_grade_II_B_H518116022915   
SAGE_Brain_normal_cerebellum_B_150385415   
SAGE_Breast_carcinoma_B_95-25939364315   
SAGE_Brain_glioblastoma_B_pooled56428414   
SAGE_Brain_medulloblastoma_B_DL768392514   
SAGE_Brain_normal_substantia_nigra_B_141773314   
SAGE_Breast_carcinoma_B_95-34767070514   
SAGE_Breast_fibroadenoma_MD55688414   
SAGE_Embryonic_stem_cell_H14_normal_p22_CL_SHE142121701514   
SAGE_Spinal_cord_normal_B_154785414   
SAGE_Breast_carcinoma_B_IDC-560451413   
SAGE_Retina_Peripheral_normal_B_159661413   
SAGE_Brain_astrocytoma_grade_III_B_H1055109886712   
SAGE_Brain_glioblastoma_B_H1353124805812   
SAGE_Brain_medulloblastoma_CL_4-HCR66599412   
SAGE_Brain_medulloblastoma_CL_D28366316412   
SAGE_Breast_carcinoma_CL_MDA435H2446631312   
SAGE_Breast_carcinoma_CL_ZR75_1_untreated32303212   
SAGE_Embryonic_stem_cell_H1_normal_p31_CL_SHE172762031712   
SAGE_Kidney_Glomeruli_Normal_B_bjballer148905312   
SAGE_Peritoneum_mesothelioma_B_1232529212   
SAGE_Prostate_carcinoma_CL_LNCaP_no-DHT62160412   
SAGE_Brain_astrocytoma_grade_III_B_407108312611   
SAGE_Brain_astrocytoma_grade_II_B_H530102439611   
SAGE_Brain_ependymoma_B_R45551825311   
SAGE_Brain_glioblastoma_B_H1425C88990511   
SAGE_Brain_medulloblastoma_B_97-05-P01569971411   
SAGE_Brain_medulloblastoma_B_98-05-P04089258511   
SAGE_Lung_adenocarcinoma_MD_L935916211   
SAGE_Muscle_normal_B_old53889311   
SAGE_Muscle_normal_B_young53947311   
SAGE_Pancreas_adenocarcinoma_B_91-1611333582211   
SAGE_Placenta_hydatidiform_mole_B_1101677611   
SAGE_Retina_Peripheral_normal_B_4Peri126691711   
SAGE_Retinal_Pigment_Epithelium_normal_B_4PeriRPE90199511   
SAGE_Vascular_normal_CS_control51642311   
SAGE_Brain_astrocytoma_grade_II_B_H127114489610   
SAGE_Brain_glioblastoma_B_R7099099510   
SAGE_Brain_medulloblastoma_B_C60974612410   
SAGE_Embryonic_stem_cell_normal_CL_hs0238363608319810   
SAGE_Skin_Melanoma_B_hs0273388177019910   
SAGE_Testis_Embryonal_Carcinoma_CL_hs0213593549032010   
SAGE_Bone_marrow_normal_AP_CD34+/CD38-/lin-8639149   
SAGE_Brain_astrocytoma_grade_III_B_R92710734459   
SAGE_Brain_astrocytoma_grade_II_B_H51610811659   
SAGE_Brain_astrocytoma_grade_II_B_H5638856849   
SAGE_Brain_normal_cortex_B_pool66245139   
SAGE_Breast_carcinoma_CL_ZR75_1_tamoxifen4005229   
SAGE_Embryonic_stem_cell_HES3_normal_p16_CL_SHE10205353109   
SAGE_Heart_normal_B_18306349   
SAGE_Liver_normal_B_16630839   
SAGE_Muscle_Rhabdomyosarcoma_B_16127039   
SAGE_Peripheral_Blood_Cancer_B_hs043063997052929   
SAGE_Prostate_carcinoma_CL_LNCaP-T4354229   
SAGE_Prostate_normal_B_26405839   
SAGE_Retina_Macula_normal_B_4Mac10141759   
SAGE_Retina_Retinoblastoma_B_18849049   
SAGE_Skin_Normal_B_hs027243975502039   
SAGE_Testis_Embryonal_Carcinoma_CL_hs021263701612999   
SAGE_Bladder_Cancer_B_hs026458339682348   
SAGE_Brain_astrocytoma_grade_III_B_H2729605948   
SAGE_Brain_astrocytoma_grade_III_B_R14011873358   
SAGE_Brain_glioblastoma_CS_TA24667828   
SAGE_Brain_medulloblastoma_B_97-05-P3127429538   
SAGE_Brain_medulloblastoma_B_H8766740438   
SAGE_Brain_meningioma_grade_II_B_SF21764871128   
SAGE_Brain_normal_thalamus_B_12401518   
SAGE_Liver_cholangiocarcinoma_B_K2D4685328   
SAGE_Lymph_node_Lymphoma_B_hs019647914811948   
SAGE_Ovary_normal_CS_HOSE_44772828   
SAGE_Prostate_carcinoma_B_LN-12259918   
SAGE_Skin_Melanoma_B_hs027438952111728   
SAGE_Stomach_normal_MD_13S4590828   
SAGE_Stomach_normal_MD_14S7335338   
SAGE_Vein_normal_B_hs023761356882718   
SAGE_Bladder_Cancer_B_hs026546401981757   
SAGE_Brain_Medulloblastoma_CL_UW228-V28082737   
SAGE_Brain_astrocytoma_grade_III_B_34310015847   
SAGE_Brain_astrocytoma_grade_II_B_H35910576447   
SAGE_Brain_astrocytoma_grade_I_B_H10437592237   
SAGE_Brain_ependymoma_B_R5127537937   
SAGE_Brain_glioblastoma_B_H83310060047   
SAGE_Brain_glioblastoma_CL_28d11062447   
SAGE_Brain_medulloblastoma_B_96-04-P0195264527   
SAGE_Brain_medulloblastoma_B_H9728537637   
SAGE_Brain_oligodendroglioma_B_H9882786417   
SAGE_Breast_carcinoma_associated_myoepithelium_CD10+_AP_DCIS68145237   
SAGE_Colon_adenocarcinoma_CL_HCT1165564127   
SAGE_Colon_carcinoma_CL_Hct116_wildtype_p53_Normal_Oxygen8039837   
SAGE_Embryonic_stem_cell_H1_normal_p54_CL_SHE1621821487   
SAGE_Embryonic_stem_cell_HSF6_normal_p50_CL_SHES922448887   
SAGE_GallBladder_Normal_B_HN8570637   
SAGE_Kidney_carcinoma_B_D210028147   
SAGE_Liver_cholangiocarcinoma_CL_K35484227   
SAGE_Liver_cholangiocarcinoma_CL_K45297327   
SAGE_Peripheral_Blood_Cancer_B_hs042957568482247   
SAGE_Stomach_carcinoma_B_xenograph_X435162027   
SAGE_Thyroid_follicular_adenoma_B_TT00510157847   
SAGE_Vascular_endothelium_hemangioma_B_1467568037   
SAGE_Brain_ependymoma_B_11506237326   
SAGE_Brain_ependymoma_B_R62812043146   
SAGE_Brain_glioblastoma_B_GBM10625976226   
SAGE_Brain_medulloblastoma_B_H3066045426   
SAGE_Brain_oligodendroglioma_B_10013244216   
SAGE_Breast_Carcinoma_CD24+_C4_IDC4035709101206   
SAGE_Breast_carcinoma_B_IDC-46409526   
SAGE_Breast_carcinoma_CL_MCF7control_0h5987726   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC86652026   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_IDC285795626   
SAGE_Breast_phyllodes_tumor_fibroblasts_AP_0702025957526   
SAGE_Cartilage_chondrosarcoma_grade_1_CL_UIIC03308116   
SAGE_Colon_adenocarcinoma_CL_Caco26068226   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES2401432146   
SAGE_Lymph_Node_normal_B_19942636   
SAGE_Ovary_adenocarcinoma_B_OVT-83198716   
SAGE_Pancreas_carcinoma_CL_ASPC3122416   
SAGE_Pancreas_carcinoma_CL_PL452955716   
SAGE_Skin_Cancer_B_hs027957032981856   
SAGE_Skin_Cancer_B_hs028438925071266   
SAGE_Skin_Normal_B_hs027158076861846   
SAGE_Stomach_adenocarcinoma_MD_HS295883126   
SAGE_Vascular_endothelium_breast_carcinoma_associated_P1H12+_AP_DCIS66531426   
SAGE_Bone_marrow_normal_B_D013657715   
SAGE_Brain_ependymoma_B_R3537382225   
SAGE_Brain_glioblastoma_B_H11106898625   
SAGE_Brain_glioblastoma_CL_H54+LacZ6690825   
SAGE_Brain_normal_leptomeninges_B_AL27247325   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC87396725   
SAGE_Breast_carcinoma_epithelium_X_MUC1+_AP7514725   
SAGE_Breast_normal_FS_NER3456515   
SAGE_Embryonic_stem_cell_BG01_normal_p20_CL_SHE1920166865   
SAGE_Eye_Retinoblastoma_B_hs0389124342323705   
SAGE_GallBladder_Adenocarcinoma_B_HAIIb6698825   
SAGE_GallBladder_Adenocarcinoma_B_NAM017854825   
SAGE_Lung_adenocarcinoma_B_13625615   
SAGE_Lymph_node_Lymphoma_B_hs020451789931305   
SAGE_Pancreas_adenocarcinoma_CL_CAPAN13767415   
SAGE_Prostate_normal_epithelium_CS_confluent7189725   
SAGE_Prostate_normal_epithelium_CS_senescent7171725   
SAGE_Retinal_Pigment_Epithelium_normal_B_4MacRPE7726225   
SAGE_Skin_Melanoma_B_hs027541282211105   
SAGE_Skin_Normal_B_hs027752697891545   
SAGE_Stomach_carcinoma_B_xenograft_X1016974925   
SAGE_Thyroid_normal_B_00111593835   
SAGE_Uterus_Normal_B_hs019464526231625   
SAGE_Vein_normal_B_hs023067556221845   
SAGE_White_Blood_Cells_monocyte_normal_AP_P110115835   
SAGE_Bladder_Cancer_B_hs02664244612904   
SAGE_Bone_marrow_normal_AP_CD34+/CD38+/lin+8159524   
SAGE_Brain_Medulloblastoma_CL_425Otx2siRNA9729124   
SAGE_Brain_Medulloblastoma_CL_UW228-N9493724   
SAGE_Brain_astrocytoma_grade_III_B_8289993924   
SAGE_Brain_ependymoma_B_2394665314   
SAGE_Brain_ependymoma_B_R5108407324   
SAGE_Brain_glioblastoma_B_H13714933814   
SAGE_Brain_medulloblastoma_B_98-05-P6084845114   
SAGE_Brain_medulloblastoma_CL_H3414392014   
SAGE_Brain_normal_cortex_B_BB5429423324   
SAGE_Breast_carcinoma_MD_DCIS4078314   
SAGE_Colon_normal_B_NC14961014   
SAGE_Kidney_embryonic_CL_293-control4195514   
SAGE_Kidney_normal_B_14099314   
SAGE_Lung_normal_CL_L154222614   
SAGE_Ovary_adenocarcinoma_B_OVT-64144314   
SAGE_Prostate_carcinoma_CL_LNCaP-C4002914   
SAGE_Rheumatoid_arthritis_synovial_fibroblast_CS4247214   
SAGE_Skin_Cancer_B_hs02833692239834   
SAGE_Skin_Normal_B_hs02783042221734   
SAGE_Stomach_adenocarcinoma_MD_HG79371424   
SAGE_Thyroid_follicular_carcinoma_B_TT00412466434   
SAGE_Bladder_Cancer_B_hs02406216426993   
SAGE_Brain_astrocyte_normal_CL_NHA55148113   
SAGE_Brain_astrocytoma_grade_III_B_43910782423   
SAGE_Brain_astrocytoma_grade_III_B_H10205157313   
SAGE_Brain_astrocytoma_grade_II_B_H38810628523   
SAGE_Brain_astrocytoma_grade_II_B_H50112830923   
SAGE_Brain_ependymoma_B_R5825218913   
SAGE_Brain_glioblastoma_CL_H3925599013   
SAGE_Brain_glioblastoma_CL_H54+EGFRvIII5698213   
SAGE_Brain_meningioma_grade_III_B_SF23665978613   
SAGE_Breast_carcinoma_B_BWHT18_DCIS5070113   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC76509113   
SAGE_Breast_carcinoma_associated_stroma_B_DCIS65704913   
SAGE_Breast_normal_B_gestational hyperplasia16170413   
SAGE_Breast_normal_epithelium_CD44+_AP_N25600813   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N156399413   
SAGE_Breast_normal_myoepithelium_CL_HME505551613   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGD010986223   
SAGE_Colon_adenocarcinoma_CL_RKO5129413   
SAGE_Embryo_Pre-Cancer_B_hs032468930161283   
SAGE_Foreskin_normal_B_hs03053940350753   
SAGE_Prostate_adenocarcinoma_MD_PR3176495113   
SAGE_Prostate_carcinoma_B_pool26603413   
SAGE_Prostate_normal_MD_PR3175927713   
SAGE_Retina_normal_B_4cRet10370123   
SAGE_Skin_Cancer_B_hs02803618498643   
SAGE_Skin_Melanoma_B_hs02765631800933   
SAGE_Skin_Normal_B_hs028165170891083   
SAGE_Vascular_normal_CS_VEGF+5731613   
SAGE_Brain_ependymoma_B_H5806861412   
SAGE_Brain_glioblastoma_hypoxia_CL_H2477176512   
SAGE_Brain_meningioma_grade_I_B_SF42716925312   
SAGE_Breast_Carcinoma_SSEA4+_C7_IDC403381240352   
SAGE_Breast_carcinoma_B_IDC-36889112   
SAGE_Breast_carcinoma_MD_LCIS6783412   
SAGE_Breast_carcinoma_associated_stroma_B_IDC76802412   
SAGE_Breast_carcinoma_epithelium_BerEP4+AP_IDC77341012   
SAGE_Breast_normal_epithelium_CD24+_AP_N57646912   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N57617312   
SAGE_Breast_normal_stroma_AP_17915212   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Anoxia7905312   
SAGE_Colon_carcinoma_CL_Hct116_wildtype_p53_Anoxia7901512   
SAGE_Embryonic_stem_cell_H13_normal_p22_CL_SHE1522110132   
SAGE_Embryonic_stem_cell_HES4_normal_p36_CL_SHE1120923232   
SAGE_Esophagus_Adenocarcinoma_B_CA1D7379312   
SAGE_Eye_lens_B_UIHI08589812   
SAGE_Lung_adenocarcinoma_MD_L108688712   
SAGE_Lung_normal_B_18870812   
SAGE_Lymph_Node_Lymphoma_B_17200812   
SAGE_Skin_Normal_B_hs02824411636652   
SAGE_Uterus_normal_B_hs01953718463492   
SAGE_White_Blood_Cells_monocytes_normal_AP_A29878612   
SAGE_Bladder_Cancer_B_hs02413335801201   
SAGE_Brain_astrocytoma_grade_III_B_H97010698211   
SAGE_Brain_ependymoma_B_R102312269011   
SAGE_Brain_fetal_normal_B_S130554631   
SAGE_Brain_glioblastoma_B_R2010105311   
SAGE_Brain_glioblastoma_B_R33610232211   
SAGE_Brain_glioblastoma_CL_4d11521211   
SAGE_Brain_glioblastoma_CL_stem_cells10841411   
SAGE_Breast_Carcinoma_CD24+_C2_IDC344720960321   
SAGE_Breast_Carcinoma_CD24+_C3_IDC384117410261   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGP010831911   
SAGE_Embryonic_stem_cell_H7_normal_p33_CL_SHE1327246521   
SAGE_Placenta_normal_B_111808311   
SAGE_Urothelium_normal_B_hs02393114307291   
SAGE_Bone_Marrow_Cancer_FS_hs04054900037100   
SAGE_Bone_Marrow_Normal_FS_hs0404484254720   
SAGE_Breast_Carcinoma_CD24+_C1_IDC314286604200   
SAGE_Breast_Carcinoma_EPCR+_C5_IDC27379656850   
SAGE_Breast_Carcinoma_EPCR+_C6_IDC314208755200   
SAGE_Breast_Normal_Epithelium_CD24+_N1_N339646880100   
SAGE_Breast_Normal_Epithelium_CD24+_N2_N351358422380   
SAGE_Breast_Normal_Epithelium_CD24+_N3_N47303600260   
SAGE_Breast_Normal_Epithelium_CD24+_N4_N48180227420   
SAGE_Breast_Normal_Epithelium_CD44+_N5_N47189093820   
SAGE_Breast_Normal_Epithelium_CD44+_N7_N5811007864120