Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
SAGE Genie
  • Human SAGE Genie Tools
  • Downloads
  • Digital Karyotyping
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Digital Northern Results

Search query: TAACTTTTAT

Color Code                              
Tags per 200,000 <2 <4 <8 <16 <32 <64 <128 <256 <512 >512

LibraryTotal Tags
in Library
Tag CountsTags per
200,000
Color
Code
SAGE_Breast_Carcinoma_SSEA4+_C7_IDC403381240103261   
SAGE_Brain_medulloblastoma_B_98-05-P608484511145   
SAGE_Breast_carcinoma_metastasis_B_249794936   
SAGE_Lymph_Node_Lymphoma_B_1720081336   
SAGE_Brain_astrocytoma_grade_III_B_R9271073441833   
SAGE_Brain_medulloblastoma_B_H275723181233   
SAGE_Breast_carcinoma_CL_MDA435C47270833   
SAGE_Placenta_normal_B_11180831932   
SAGE_Breast_carcinoma_B_IDC-4640951031   
SAGE_White_Blood_Cells_breast_carcinoma_associated_CD45+_AP_DCIS6661761030   
SAGE_Brain_astrocytoma_grade_II_B_H5301024391529   
SAGE_Placenta_hydatidiform_mole_B_11016771529   
SAGE_Rheumatoid_arthritis_synovial_fibroblast_CS42472628   
SAGE_Brain_astrocytoma_grade_II_B_H5181160221627   
SAGE_Brain_glioblastoma_B_H13531248051727   
SAGE_Kidney_carcinoma_B_D21002811427   
SAGE_Lung_normal_B_1887081227   
SAGE_Brain_ependymoma_B_R512753791026   
SAGE_Brain_ependymoma_B_R58252189726   
SAGE_Brain_medulloblastoma_B_97-05-P312742951026   
SAGE_Breast_carcinoma_associated_stroma_B_IDC768024926   
SAGE_Muscle_Rhabdomyosarcoma_B_161270826   
SAGE_Brain_normal_peds_cortex_B_H1571775541025   
SAGE_Leukocytes_normal_B_147873625   
SAGE_Breast_normal_organoid_B58181724   
SAGE_Brain_Medulloblastoma_CL_UW228-N949371123   
SAGE_Brain_medulloblastoma_B_DL768392823   
SAGE_Brain_normal_substantia_nigra_B_141773523   
SAGE_Breast_carcinoma_B_95-34767070823   
SAGE_Breast_carcinoma_B_DCIS-460605723   
SAGE_Breast_carcinoma_MD_LCIS67834823   
SAGE_Universal_reference_human_RNA_CL51729623   
SAGE_White_Blood_Cells_lung_macrophage_normal_AP_L151872623   
SAGE_Breast_metastatic_carcinoma_B_LN145087522   
SAGE_Peritoneum_normal_B_1353527622   
SAGE_White_Blood_Cells_monocyte_depleted_mononuclear_cells_normal_AP_A153795622   
SAGE_Bone_marrow_normal_B_D0136577421   
SAGE_Brain_glioblastoma_CL_28d1106241221   
SAGE_Brain_glioblastoma_CS_TA246678521   
SAGE_Breast_carcinoma_CL_MDA435H2446631521   
SAGE_GallBladder_Normal_B_HN85706921   
SAGE_Brain_astrocytoma_grade_II_B_H56388568920   
SAGE_Brain_fetal_normal_B_S13055463220   
SAGE_Brain_glioblastoma_B_H111068986720   
SAGE_Brain_glioblastoma_B_R70990991020   
SAGE_Brain_astrocytoma_grade_III_B_5841030081019   
SAGE_Brain_ependymoma_B_R51084073819   
SAGE_Breast_normal_epithelium_CD24+_AP_N241551419   
SAGE_Thyroid_follicular_adenoma_B_TT0051015781019   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P11028731019   
SAGE_Brain_ependymoma_B_R35373822718   
SAGE_Brain_medulloblastoma_B_96-04-P01952645518   
SAGE_Brain_medulloblastoma_B_98-09-P55885984818   
SAGE_Brain_medulloblastoma_B_H97285376818   
SAGE_Breast_carcinoma_epithelium_PROCR+_AP_IDC2852781518   
SAGE_Breast_normal_myoepithelium_CL_HME5055516518   
SAGE_Uterus_endometrium_normal_CS_DI121991218   
SAGE_Vein_normal_B_hs0237613568856118   
SAGE_Brain_astrocytoma_grade_II_B_H5011283091117   
SAGE_Brain_glioblastoma_CL_4d1152121017   
SAGE_Brain_medulloblastoma_B_98-13-P30145342417   
SAGE_Brain_medulloblastoma_B_H87667404617   
SAGE_Breast_carcinoma_associated_stroma_B_DCIS657049517   
SAGE_Kidney_embryonic_CL_293+beta-catenin23519217   
SAGE_White_Blood_Cells_breast_carcinoma_associated_CD45+_AP_IDC734399317   
SAGE_Brain_astrocytoma_grade_II_B_H388106285916   
SAGE_Brain_ependymoma_B_115062373516   
SAGE_Breast_metastatic_carcinoma_B_LN260343516   
SAGE_Breast_phyllodes_tumor_fibroblasts_AP_07020259575516   
SAGE_Brain_ependymoma_B_R45551825415   
SAGE_Breast_carcinoma_B_95-25939364315   
SAGE_Retina_macula_normal_B_HMAC2102417815   
SAGE_Retinal_Pigment_Epithelium_normal_B_4MacRPE77262615   
SAGE_Skin_Normal_B_hs0278304222123615   
SAGE_White_Blood_Cells_monocyte_depleted_mononuclear_cells_normal_AP_P151634415   
SAGE_White_Blood_Cells_monocyte_normal_AP_P1101158815   
SAGE_Brain_astrocytoma_grade_III_B_439107824814   
SAGE_Brain_astrocytoma_grade_III_B_82899939714   
SAGE_Brain_medulloblastoma_B_97-05-P01569971514   
SAGE_Breast_carcinoma_CL_MDA435H4840323314   
SAGE_Breast_normal_myoepithelium_CD10+_AP_IDC769006514   
SAGE_Brain_astrocytoma_grade_III_B_343100158713   
SAGE_Brain_astrocytoma_grade_III_B_R140118733813   
SAGE_Brain_astrocytoma_grade_II_B_H127114489813   
SAGE_Brain_medulloblastoma_B_98-04-P49443068313   
SAGE_Brain_medulloblastoma_B_H132259498413   
SAGE_Pancreas_carcinoma_CL_PL4529557213   
SAGE_Prostate_normal_MD_PR31759277413   
SAGE_Retinal_Pigment_Epithelium_normal_B_4PeriRPE90199613   
SAGE_Uterus_normal_B_hs0195371846325513   
SAGE_Brain_astrocytoma_grade_II_B_H516108116712   
SAGE_Brain_ependymoma_B_23946653312   
SAGE_Brain_medulloblastoma_B_98-04-P11732570212   
SAGE_Brain_medulloblastoma_CL_mhh-147858312   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC765091412   
SAGE_Embryonic_stem_cell_H14_normal_p22_CL_SHE142121701312   
SAGE_Lymph_node_Lymphoma_B_hs0204517899331812   
SAGE_Ovary_adenocarcinoma_B_OVT-831987212   
SAGE_Stomach_carcinoma_B_G18963075412   
SAGE_Brain_ependymoblastoma_B_81933975211   
SAGE_Brain_ependymoma_B_H58068614411   
SAGE_Brain_glioblastoma_B_H1425C88990511   
SAGE_Brain_glioblastoma_B_H833100600611   
SAGE_Brain_glioblastoma_CL_stem_cells108414611   
SAGE_Brain_glioblastoma_hypoxia_CL_H24771765411   
SAGE_Brain_medulloblastoma_B_DL583671511   
SAGE_Brain_normal_cerebellum_B_150385311   
SAGE_Breast_carcinoma_epithelium_CD44+_AP_PE252342311   
SAGE_Breast_carcinoma_epithelium_PROCR+_AP_IDC2954080311   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES24014322311   
SAGE_GallBladder_Adenocarcinoma_B_HAIIb66988411   
SAGE_Liver_cholangiocarcinoma_CL_K452973311   
SAGE_Lung_adenocarcinoma_MD_L1086887511   
SAGE_Prostate_normal_epithelium_CS_senescent71717411   
SAGE_Vascular_normal_CS_control51642311   
SAGE_White_Blood_Cells_monocytes_normal_AP_P254426311   
SAGE_Brain_astrocytoma_grade_III_B_H27296059510   
SAGE_Brain_medulloblastoma_B_127338614210   
SAGE_Brain_medulloblastoma_B_C60974612410   
SAGE_Breast_Carcinoma_CD24+_C3_IDC38411741021110   
SAGE_Breast_carcinoma_CL_MCF7control_0h59877310   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N157222310   
SAGE_Embryonic_stem_cell_HES4_normal_p36_CL_SHE112092321110   
SAGE_Retina_Peripheral_normal_B_159661310   
SAGE_Skin_Melanoma_B_hs0273388177020010   
SAGE_Stomach_adenocarcinoma_MD_HS2958831310   
SAGE_Vascular_endothelium_hemangioma_B_14675680410   
SAGE_Vascular_normal_CS_VEGF+57316310   
SAGE_Brain_Medulloblastoma_CL_425C26264239   
SAGE_Brain_astrocytoma_grade_III_B_H97010698259   
SAGE_Brain_astrocytoma_grade_II_B_H35910576459   
SAGE_Brain_normal_cerebellum_B_BB5424050029   
SAGE_Breast_carcinoma_B_CT15_IDC2184019   
SAGE_Embryonic_stem_cell_BG01_normal_p20_CL_SHE19201668109   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES115173579   
SAGE_Fibroblasts_CL_postcrisis2183319   
SAGE_Kidney_embryonic_CL_293-control4195529   
SAGE_Kidney_normal_B_14099329   
SAGE_Liver_normal_B_16630839   
SAGE_Pancreas_normal_B_12152019   
SAGE_Prostate_carcinoma_CL_LNCaP-T4354229   
SAGE_Retina_Macula_normal_B_4Mac10141759   
SAGE_Retina_normal_B_4cRet10370159   
SAGE_Testis_Embryonal_Carcinoma_CL_hs021263701612969   
SAGE_Vein_normal_B_hs023067556223339   
SAGE_Bladder_Cancer_B_hs026546401982058   
SAGE_Brain_Medulloblastoma_CL_425Otx2siRNA9729148   
SAGE_Brain_glioblastoma_B_H13714933828   
SAGE_Brain_normal_thalamus_B_12401518   
SAGE_Embryonic_stem_cell_H7_normal_p33_CL_SHE13272465118   
SAGE_Liver_cholangiocarcinoma_B_K2D4685328   
SAGE_Ovary_normal_CS_HOSE_44772828   
SAGE_Peripheral_Blood_Cancer_B_hs043063997052688   
SAGE_Prostate_carcinoma_B_LN-12259918   
SAGE_Skin_Normal_B_hs027243975501938   
SAGE_Skin_Normal_B_hs027752697892288   
SAGE_Stomach_carcinoma_B_xenograft_X1016974938   
SAGE_Stomach_normal_MD_13S4590828   
SAGE_Stomach_normal_MD_14S7335338   
SAGE_Stomach_normal_epithelium_B_body12476118   
SAGE_Testis_Embryonal_Carcinoma_CL_hs021359354902678   
SAGE_White_Blood_Cells_monocytes_normal_AP_A29878648   
SAGE_Bladder_Cancer_B_hs026642446121667   
SAGE_Brain_ependymoma_B_13945631427   
SAGE_Brain_glioblastoma_B_R2010105347   
SAGE_Brain_oligodendroglioma_B_H9882786417   
SAGE_Breast_carcinoma_associated_myoepithelium_CD10+_AP_DCIS68145237   
SAGE_Breast_fibroadenoma_MD5568827   
SAGE_Breast_normal_epithelium_CD44+_AP_N25600827   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N57617337   
SAGE_Breast_normal_stroma_B_IDC85048527   
SAGE_Embryonic_stem_cell_H1_normal_p31_CL_SHE17276203117   
SAGE_Embryonic_stem_cell_HSF6_normal_p50_CL_SHES922448887   
SAGE_Muscle_normal_B_young5394727   
SAGE_Retina_Peripheral_normal_B_210531247   
SAGE_Skin_Cancer_B_hs028438925071557   
SAGE_Skin_Melanoma_B_hs027438952111457   
SAGE_Vascular_endothelium_normal_breast_associated_P1H12+_AP_15702327   
SAGE_Vascular_endothelium_normal_liver_associated_AP_NLEC17775937   
SAGE_Bone_Marrow_AML_FS_CD34+CD38+6151926   
SAGE_Brain_ependymoma_B_R102312269046   
SAGE_Brain_glioblastoma_B_GBM10625976226   
SAGE_Brain_medulloblastoma_B_H3066045426   
SAGE_Brain_medulloblastoma_B_H4845746926   
SAGE_Brain_medulloblastoma_CL_D2836631626   
SAGE_Brain_oligodendroglioma_B_10013244216   
SAGE_Breast_Carcinoma_CD24+_C4_IDC4035709101226   
SAGE_Breast_carcinoma_CL_MCF7estradiol_3h6016226   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS78918436   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC96593526   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N156399426   
SAGE_Colon_adenocarcinoma_CL_SW8376114826   
SAGE_Embryo_Pre-Cancer_B_hs032468930162396   
SAGE_Eye_Retinoblastoma_B_hs0389124342323966   
SAGE_Lung_normal_CL_L162898316   
SAGE_Lymph_Node_normal_B_19942636   
SAGE_Placenta_first_trimester_normal_B_18926536   
SAGE_Retina_Peripheral_normal_B_4Peri12669146   
SAGE_Retina_Retinoblastoma_B_18849036   
SAGE_Skin_Cancer_B_hs028336922391226   
SAGE_Skin_Melanoma_B_hs027541282211366   
SAGE_Thyroid_normal_B_00111593846   
SAGE_Uterus_Normal_B_hs019464526232016   
SAGE_Vascular_endothelium_breast_carcinoma_associated_P1H12+_AP_DCIS66531426   
SAGE_White_Blood_Cells_monocyte_normal_AP_A19991336   
SAGE_White_Blood_Cells_normal_breast_associated_CD45+_AP3198516   
SAGE_Brain_astrocytoma_grade_III_B_40710831235   
SAGE_Brain_astrocytoma_grade_III_B_H105510988635   
SAGE_Brain_normal_leptomeninges_B_AL27247325   
SAGE_Breast_Carcinoma_CD24+_C2_IDC3447209601305   
SAGE_Breast_carcinoma_B_IDC-36889125   
SAGE_Embryonic_stem_cell_HES3_normal_p16_CL_SHE1020535365   
SAGE_Pancreas_adenocarcinoma_B_91-161133358215   
SAGE_Peripheral_Blood_Cancer_B_hs042957568481455   
SAGE_Skin_Cancer_B_hs028036184981015   
SAGE_Urothelium_normal_B_hs02393114307855   
SAGE_White_Blood_Cells_monocytes_normal_AP_C110165635   
SAGE_Brain_Medulloblastoma_CL_UW228-V28082724   
SAGE_Brain_ependymoma_B_R62812043134   
SAGE_Brain_medulloblastoma_B_98-05-P0408925824   
SAGE_Brain_meningioma_grade_II_B_SF36224485714   
SAGE_Breast_carcinoma_B_DCIS-54309814   
SAGE_Colon_carcinoma_CL_Hct116_wildtype_p53_Normal_Oxygen8039824   
SAGE_Colon_normal_B_NC24847914   
SAGE_Embryonic_stem_cell_normal_CL_hs02383636083864   
SAGE_GallBladder_Adenocarcinoma_B_C018138024   
SAGE_Kidney_Glomeruli_Normal_B_bjballer14890514   
SAGE_Ovary_adenocarcinoma_B_OVT-64144314   
SAGE_Skin_Melanoma_B_hs027656318001394   
SAGE_Skin_Normal_B_hs027158076861324   
SAGE_Stomach_adenocarcinoma_MD_G3294680214   
SAGE_Thyroid_follicular_carcinoma_B_TT00412466434   
SAGE_Bladder_Cancer_B_hs02413335801573   
SAGE_Bladder_Cancer_B_hs026458339681103   
SAGE_Brain_astrocyte_normal_CL_NHA55148113   
SAGE_Brain_glioblastoma_B_pooled5642813   
SAGE_Brain_glioblastoma_control_CL_H2476042813   
SAGE_Brain_medulloblastoma_B_H14136185313   
SAGE_Brain_medulloblastoma_CL_4-HCR6659913   
SAGE_Brain_meningioma_grade_III_B_SF23665978613   
SAGE_Breast_carcinoma_associated_myoepithelium_CD10+_AP_DCIS75199313   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC96353913   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS-26616813   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS-35740213   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_IDC285795613   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_PE25013213   
SAGE_Breast_normal_B_gestational hyperplasia16170413   
SAGE_Breast_normal_epithelium_BEREP4+_AP_N25051213   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGD010986223   
SAGE_Colon_adenocarcinoma_CL_HCT1165564113   
SAGE_Colon_adenocarcinoma_CL_RKO5129413   
SAGE_Foreskin_normal_B_hs03053940350743   
SAGE_Liver_cholangiocarcinoma_B_K16031913   
SAGE_Liver_cholangiocarcinoma_CL_K35484213   
SAGE_Lymph_node_Lymphoma_B_hs01964791481873   
SAGE_Ovary_adenocarcinoma_B_OVT-75351413   
SAGE_Prostate_adenocarcinoma_MD_PR3176495113   
SAGE_Prostate_normal_B_26405813   
SAGE_Spinal_cord_normal_B_15478513   
SAGE_Stomach_carcinoma_B_xenograph_X435162013   
SAGE_Testis_Embyronal_Carcinoma_B_16635213   
SAGE_Brain_astrocytoma_grade_I_B_H10437592212   
SAGE_Brain_normal_cortex_B_BB5429423312   
SAGE_Breast_Carcinoma_EPCR+_C6_IDC314208755462   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC87396712   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS67285712   
SAGE_Breast_carcinoma_myoepithelium_X_ITGB6+_AP7878512   
SAGE_Breast_normal_epithelium_CD44+_AP_N58046412   
SAGE_Breast_normal_epithelium_MUC1+_AP_N157170412   
SAGE_Breast_normal_stroma_AP_17915212   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Anoxia7905312   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Normal_Oxygen7928412   
SAGE_Embryonic_stem_cell_H1_normal_p54_CL_SHE1621821432   
SAGE_Eye_lens_B_UIHI08589812   
SAGE_GallBladder_Adenocarcinoma_B_NAM017854812   
SAGE_Heart_normal_B_18306312   
SAGE_Prostate_normal_epithelium_CS_confluent7189712   
SAGE_Stomach_adenocarcinoma_MD_HG79371412   
SAGE_Bladder_Cancer_B_hs02406216426561   
SAGE_Brain_glioblastoma_B_R33610232211   
SAGE_Breast_Carcinoma_CD24+_C1_IDC314286604341   
SAGE_Breast_Carcinoma_EPCR+_C5_IDC273796568341   
SAGE_Skin_Cancer_B_hs02795703298421   
SAGE_Skin_Normal_B_hs02816517089591   
SAGE_Bone_Marrow_Normal_FS_hs0404484254780   
SAGE_Breast_Normal_Epithelium_CD24+_N1_N33964688010   
SAGE_Breast_Normal_Epithelium_CD24+_N3_N47303600230   
SAGE_Breast_Normal_Epithelium_CD24+_N4_N48180227410   
SAGE_Breast_Normal_Epithelium_CD44+_N5_N47189093810   
SAGE_Breast_Normal_Epithelium_CD44+_N7_N5811007864520   
SAGE_Embryonic_stem_cell_H13_normal_p22_CL_SHE1522110110   
SAGE_Skin_Normal_B_hs02824411636100