Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
SAGE Genie
  • Human SAGE Genie Tools
  • Downloads
  • Digital Karyotyping
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Digital Northern Results

Search query: TAAATGTTGA

Color Code                              
Tags per 200,000 <2 <4 <8 <16 <32 <64 <128 <256 <512 >512

LibraryTotal Tags
in Library
Tag CountsTags per
200,000
Color
Code
SAGE_Brain_astrocytoma_grade_III_B_H9701069822342   
SAGE_Brain_ependymoma_B_1150623731135   
SAGE_Brain_medulloblastoma_B_H1322594981033   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGP01083191731   
SAGE_Spinal_cord_normal_B_154785829   
SAGE_Breast_normal_myoepithelium_CL_HME5055516725   
SAGE_Brain_astrocytoma_grade_II_B_H3881062851324   
SAGE_Brain_astrocytoma_grade_II_B_H5011283091624   
SAGE_Brain_ependymoma_B_139456314724   
SAGE_Embryonic_stem_cell_normal_CL_hs0238363608343924   
SAGE_Brain_ependymoma_B_R510840731023   
SAGE_Breast_Carcinoma_CD24+_C1_IDC31428660449623   
SAGE_Skin_Melanoma_B_hs0275412822147623   
SAGE_Brain_astrocytoma_grade_III_B_828999391122   
SAGE_Brain_normal_cortex_B_pool662451722   
SAGE_Lymph_Node_Lymphoma_B_172008822   
SAGE_Brain_astrocytoma_grade_III_B_5841030081121   
SAGE_Brain_astrocytoma_grade_II_B_H5301024391121   
SAGE_Breast_Carcinoma_EPCR+_C6_IDC31420875544321   
SAGE_Thyroid_follicular_adenoma_B_TT0051015781121   
SAGE_Brain_astrocytoma_grade_III_B_H10551098861120   
SAGE_Brain_astrocytoma_grade_III_B_R1401187331220   
SAGE_Brain_astrocytoma_grade_II_B_H1271144891220   
SAGE_Brain_glioblastoma_CL_28d1106241119   
SAGE_Testis_Embryonal_Carcinoma_CL_hs0213593549059019   
SAGE_Brain_medulloblastoma_B_98-04-P11732570318   
SAGE_Brain_oligodendroglioma_B_100132442318   
SAGE_Rheumatoid_arthritis_synovial_fibroblast_CS42472418   
SAGE_Bladder_Cancer_B_hs0264583396850017   
SAGE_Brain_medulloblastoma_B_H48457469517   
SAGE_Embryonic_stem_cell_H13_normal_p22_CL_SHE152211011917   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES24014323617   
SAGE_Vein_normal_B_hs0237613568853017   
SAGE_Colon_adenocarcinoma_CL_Caco260682516   
SAGE_Prostate_normal_MD_PR31759277516   
SAGE_Brain_glioblastoma_CL_4d115212915   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIEK037747315   
SAGE_Skin_Normal_B_hs0272439755033615   
SAGE_Brain_Medulloblastoma_CL_UW228-V280827614   
SAGE_Brain_astrocytoma_grade_III_B_407108312814   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGD0109862814   
SAGE_Eye_Retinoblastoma_B_hs03891243423287614   
SAGE_GallBladder_Adenocarcinoma_B_C0181380614   
SAGE_Kidney_embryonic_CL_293-control41955314   
SAGE_Ovary_cystadenoma_CL_ML10-1055144414   
SAGE_Prostate_carcinoma_CL_LNCaP-C40029314   
SAGE_Skin_Melanoma_B_hs0274389521128714   
SAGE_Thyroid_follicular_carcinoma_B_TT004124664914   
SAGE_Brain_astrocytoma_grade_II_B_H359105764713   
SAGE_Brain_glioblastoma_B_H1425C88990613   
SAGE_Brain_medulloblastoma_B_H27572318513   
SAGE_Breast_carcinoma_B_DCIS-543098313   
SAGE_Breast_carcinoma_CL_MCF7estradiol_10H60725413   
SAGE_Prostate_carcinoma_CL_LNCaP-T43542313   
SAGE_Skin_Melanoma_B_hs0273388177025913   
SAGE_Brain_ependymoma_B_23946653312   
SAGE_Brain_glioblastoma_B_H1353124805812   
SAGE_Brain_glioblastoma_CL_stem_cells108414712   
SAGE_Brain_glioblastoma_CS_TA246678312   
SAGE_Breast_carcinoma_CL_MDA435C47270312   
SAGE_Liver_normal_B_166308412   
SAGE_Brain_ependymoblastoma_B_81933975211   
SAGE_Brain_medulloblastoma_B_98-05-P04089258511   
SAGE_Breast_carcinoma_epithelium_CD44+_AP_PE252342311   
SAGE_Breast_normal_epithelium_MUC1+_AP_N1571704411   
SAGE_Embryonic_stem_cell_HES4_normal_p36_CL_SHE112092321211   
SAGE_Foreskin_normal_B_hs0305394035023211   
SAGE_GallBladder_Adenocarcinoma_B_HAIIb66988411   
SAGE_Skin_Cancer_B_hs0283369223921911   
SAGE_Skin_Normal_B_hs0271580768633711   
SAGE_Testis_Embryonal_Carcinoma_CL_hs0212637016138011   
SAGE_White_Blood_Cells_monocyte_depleted_mononuclear_cells_normal_AP_A153795311   
SAGE_Bladder_Cancer_B_hs0241333580118210   
SAGE_Brain_astrocytoma_grade_II_B_H518116022610   
SAGE_Brain_ependymoma_B_R51275379410   
SAGE_Brain_glioblastoma_B_R7099099510   
SAGE_Skin_Normal_B_hs0277526978927110   
SAGE_Skin_Normal_B_hs0278304222116610   
SAGE_Bladder_Cancer_B_hs026642446121999   
SAGE_Bone_Marrow_AML_FS_CD34+CD38+6151939   
SAGE_Brain_astrocytoma_grade_III_B_43910782459   
SAGE_Brain_astrocytoma_grade_III_B_R92710734459   
SAGE_Brain_astrocytoma_grade_II_B_H51610811659   
SAGE_Brain_astrocytoma_grade_II_B_H5638856849   
SAGE_Brain_glioblastoma_B_H83310060059   
SAGE_Brain_glioblastoma_control_CL_H2476042839   
SAGE_Brain_medulloblastoma_B_98-09-P5588598449   
SAGE_Brain_normal_substantia_nigra_B_14177329   
SAGE_Breast_Carcinoma_EPCR+_C5_IDC2737965681719   
SAGE_Breast_carcinoma_CL_MDA435H484032329   
SAGE_Breast_metastatic_carcinoma_B_LN26034339   
SAGE_Colon_carcinoma_CL_Hct116_wildtype_p53_Normal_Oxygen8039849   
SAGE_Embryonic_stem_cell_H1_normal_p54_CL_SHE16218214109   
SAGE_Embryonic_stem_cell_H7_normal_p33_CL_SHE13272465139   
SAGE_Embryonic_stem_cell_HSF6_normal_p50_CL_SHES9224488119   
SAGE_Muscle_Rhabdomyosarcoma_B_16127039   
SAGE_Ovary_carcinoma_CL_A27802136919   
SAGE_Retina_Retinoblastoma_B_18849049   
SAGE_Retina_normal_B_4cRet10370159   
SAGE_Stomach_adenocarcinoma_B_G2346492539   
SAGE_Stomach_carcinoma_B_G1896307539   
SAGE_White_Blood_Cells_monocyte_normal_AP_P110115859   
SAGE_Brain_glioblastoma_B_H13714933828   
SAGE_Brain_medulloblastoma_B_98-05-P6084845128   
SAGE_Brain_normal_cortex_B_BB5429423348   
SAGE_Brain_normal_thalamus_B_12401518   
SAGE_Kidney_embryonic_CL_293+beta-catenin2351918   
SAGE_Peripheral_Blood_Cancer_B_hs042957568482468   
SAGE_Peripheral_Blood_Cancer_B_hs043063997052878   
SAGE_Stomach_normal_epithelium_B_body12476118   
SAGE_Vein_normal_B_hs023067556222898   
SAGE_Brain_astrocytoma_grade_III_B_H10205157327   
SAGE_Brain_fetal_normal_B_S1305546117   
SAGE_Brain_glioblastoma_B_R33610232247   
SAGE_Brain_medulloblastoma_B_96-04-P0195264527   
SAGE_Breast_Carcinoma_CD24+_C2_IDC3447209601877   
SAGE_Embryonic_stem_cell_BG01_normal_p20_CL_SHE1920166887   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES115173567   
SAGE_Heart_normal_B_18306337   
SAGE_Liver_cholangiocarcinoma_CL_K35484227   
SAGE_Retina_macula_normal_B_HMAC210241747   
SAGE_Skin_Cancer_B_hs028036184981427   
SAGE_Skin_Cancer_B_hs028438925071537   
SAGE_Skin_Normal_B_hs028244116361567   
SAGE_White_Blood_Cells_lung_macrophage_normal_AP_L15187227   
SAGE_White_Blood_Cells_monocytes_normal_AP_C110165647   
SAGE_Brain_Medulloblastoma_CL_425C26264226   
SAGE_Brain_Medulloblastoma_CL_425Otx2siRNA9729136   
SAGE_Brain_Medulloblastoma_CL_UW228-N9493736   
SAGE_Brain_astrocytoma_grade_III_B_H2729605936   
SAGE_Brain_medulloblastoma_B_H3066045426   
SAGE_Brain_medulloblastoma_CL_4-HCR6659926   
SAGE_Breast_carcinoma_B_IDC-46409526   
SAGE_Breast_carcinoma_CL_MCF7estradiol_3h6016226   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC76509126   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N156399426   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGX08843936   
SAGE_Embryonic_stem_cell_H1_normal_p31_CL_SHE1727620396   
SAGE_Embryonic_stem_cell_HES3_normal_p16_CL_SHE1020535376   
SAGE_Lung_adenocarcinoma_MD_L108688736   
SAGE_Pancreas_adenocarcinoma_B_96-62523321316   
SAGE_Pancreas_carcinoma_CL_ASPC3122416   
SAGE_Pancreas_normal_CS_HX3198516   
SAGE_Retina_Peripheral_normal_B_15966126   
SAGE_Skin_Normal_B_hs028165170891996   
SAGE_Uterus_normal_B_hs019537184631226   
SAGE_Brain_ependymoma_B_H5806861425   
SAGE_Brain_ependymoma_B_R3537382225   
SAGE_Brain_glioblastoma_hypoxia_CL_H2477176525   
SAGE_Brain_medulloblastoma_B_C6097461225   
SAGE_Brain_medulloblastoma_B_DL76839225   
SAGE_Brain_medulloblastoma_B_H8766740425   
SAGE_Breast_carcinoma_MD_LCIS6783425   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_IDC263936115   
SAGE_Breast_carcinoma_myoepithelium_X_ITGB6+_AP7878525   
SAGE_Breast_normal_FS_NER3456515   
SAGE_Breast_normal_epithelium_CD24+_AP_N57646925   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Anoxia7905325   
SAGE_Embryonic_stem_cell_H14_normal_p22_CL_SHE1421217065   
SAGE_Esophagus_Dysplasia_B_HGD027861125   
SAGE_Pancreas_adenocarcinoma_CL_CAPAN13767415   
SAGE_Prostate_carcinoma_CL_PC3_Mock3881915   
SAGE_Retina_Macula_normal_B_4Mac10141735   
SAGE_Retinal_Pigment_Epithelium_normal_B_4MacRPE7726225   
SAGE_Skin_Cancer_B_hs027957032981495   
SAGE_Vascular_endothelium_hemangioma_B_1467568025   
SAGE_Bladder_Cancer_B_hs024062164261414   
SAGE_Brain_medulloblastoma_B_98-13-P3014534214   
SAGE_Brain_normal_cerebellum_B_BB5424050014   
SAGE_Breast_carcinoma_CL_MDA435H244663114   
SAGE_Breast_carcinoma_associated_myoepithelium_CD10+_AP_DCIS68145224   
SAGE_Breast_normal_epithelium_BEREP4+_AP_N14872914   
SAGE_Breast_normal_epithelium_CD24+_AP_N154143014   
SAGE_Breast_normal_epithelium_CD24+_AP_N24155114   
SAGE_Embryo_Pre-Cancer_B_hs032468930161424   
SAGE_GallBladder_Normal_B_HN8570624   
SAGE_Kidney_Glomeruli_Normal_B_bjballer14890514   
SAGE_Liver_cholangiocarcinoma_B_K2D4685314   
SAGE_Lymph_Node_normal_B_19942624   
SAGE_Ovary_normal_CL_IOSE29EC-114715914   
SAGE_Placenta_first_trimester_normal_B_18926524   
SAGE_Prostate_carcinoma_CL_PC3_AS24076814   
SAGE_Stomach_normal_MD_13S4590814   
SAGE_Uterus_Normal_B_hs019464526231364   
SAGE_Bladder_Cancer_B_hs02654640198873   
SAGE_Brain_astrocyte_normal_CL_NHA55148113   
SAGE_Brain_ependymoma_B_R102312269023   
SAGE_Brain_ependymoma_B_R62812043123   
SAGE_Brain_glioblastoma_B_R2010105323   
SAGE_Brain_medulloblastoma_CL_D2836631613   
SAGE_Breast_Carcinoma_CD24+_C4_IDC403570910613   
SAGE_Breast_Carcinoma_SSEA4+_C7_IDC403381240573   
SAGE_Breast_Normal_Epithelium_CD44+_N7_N58110078642023   
SAGE_Breast_carcinoma_B_BWHT18_DCIS5070113   
SAGE_Breast_carcinoma_B_DCIS-46060513   
SAGE_Breast_carcinoma_B_IDC-56045113   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC96353913   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC86652013   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC96593513   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_IDC285795613   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_PE25013213   
SAGE_Breast_carcinoma_epithelium_CD44+_AP_ASC35247813   
SAGE_Breast_carcinoma_epithelium_PROCR+_AP_IDC285278113   
SAGE_Breast_carcinoma_epithelium_PROCR+_AP_IDC295408013   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N15722213   
SAGE_Breast_normal_stroma_B_IDC85048513   
SAGE_Breast_phyllodes_tumor_fibroblasts_AP_0702025957513   
SAGE_Colon_adenocarcinoma_B_Tu1025570013   
SAGE_Muscle_normal_B_old5388913   
SAGE_Muscle_normal_B_young5394713   
SAGE_Placenta_normal_B_111808323   
SAGE_Prostate_normal_B_26405813   
SAGE_Stomach_adenocarcinoma_MD_HS295883113   
SAGE_Testis_Embyronal_Carcinoma_B_16635213   
SAGE_Thyroid_normal_B_00111593823   
SAGE_Urothelium_normal_B_hs02393114307533   
SAGE_Vascular_endothelium_breast_carcinoma_associated_P1H12+_AP_DCIS66531413   
SAGE_Vascular_normal_CS_control5164213   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P110287323   
SAGE_Bone_marrow_normal_AP_CD34+/CD38-/lin-8639112   
SAGE_Brain_glioblastoma_B_H11106898612   
SAGE_Brain_glioblastoma_CL_H54+LacZ6690812   
SAGE_Brain_medulloblastoma_B_97-05-P0156997112   
SAGE_Brain_medulloblastoma_B_97-05-P3127429512   
SAGE_Brain_medulloblastoma_B_DL58367112   
SAGE_Brain_normal_leptomeninges_B_AL27247312   
SAGE_Brain_normal_peds_cortex_B_H15717755412   
SAGE_Breast_carcinoma_B_95-3476707012   
SAGE_Breast_carcinoma_B_IDC-36889112   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC87396712   
SAGE_Breast_carcinoma_associated_stroma_B_IDC76802412   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS67285712   
SAGE_Breast_carcinoma_epithelium_X_MUC1+_AP7514712   
SAGE_Breast_normal_epithelium_CD44+_AP_N58046412   
SAGE_Breast_normal_epithelium_MUC1+_AP_N57622712   
SAGE_Cartilage_chondrosarcoma_grade_2_B_UIGA09384612   
SAGE_Cartilage_chondrosarcoma_grade_2_CL_UIFU07501912   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIFK08594412   
SAGE_Colon_carcinoma_CL_Hct116_wildtype_p53_Anoxia7901512   
SAGE_Esophagus_Dysplasia_B_LGD017490412   
SAGE_Eye_lens_B_UIHI08589812   
SAGE_GallBladder_Adenocarcinoma_B_NAM017854812   
SAGE_Lung_normal_B_18870812   
SAGE_Stomach_carcinoma_B_xenograft_X1016974912   
SAGE_Stomach_normal_MD_14S7335312   
SAGE_White_Blood_Cells_monocyte_normal_AP_A19991312   
SAGE_Brain_astrocytoma_grade_III_B_34310015811   
SAGE_Breast_Carcinoma_CD24+_C3_IDC384117410211   
SAGE_Kidney_carcinoma_B_D210028111   
SAGE_Lymph_node_Lymphoma_B_hs02045178993501   
SAGE_Retina_Peripheral_normal_B_4Peri12669111   
SAGE_Skin_Melanoma_B_hs02765631800441   
SAGE_Bone_Marrow_Cancer_FS_hs04054900037210   
SAGE_Bone_Marrow_Normal_FS_hs0404484254720   
SAGE_Breast_Normal_Epithelium_CD24+_N1_N339646880110   
SAGE_Breast_Normal_Epithelium_CD24+_N2_N351358422370   
SAGE_Breast_Normal_Epithelium_CD24+_N3_N473036002110   
SAGE_Breast_Normal_Epithelium_CD24+_N4_N48180227430   
SAGE_Breast_Normal_Epithelium_CD44+_N5_N47189093850   
SAGE_Breast_Normal_Epithelium_CD44+_N6_N48104876510   
SAGE_Lymph_node_Lymphoma_B_hs01964791481230