Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
SAGE Genie
  • Human SAGE Genie Tools
  • Downloads
  • Digital Karyotyping
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Digital Northern Results

Search query: TAAATGAATA

Color Code                              
Tags per 200,000 <2 <4 <8 <16 <32 <64 <128 <256 <512 >512

LibraryTotal Tags
in Library
Tag CountsTags per
200,000
Color
Code
SAGE_Skin_Melanoma_B_hs027438952112248115   
SAGE_Skin_Melanoma_B_hs027338817702118109   
SAGE_Bladder_Cancer_B_hs024133358011731103   
SAGE_Peripheral_Blood_Cancer_B_hs043063997053234101   
SAGE_Peripheral_Blood_Cancer_B_hs04295756848246985   
SAGE_Embryonic_stem_cell_normal_CL_hs02383636083148481   
SAGE_Urothelium_normal_B_hs02393114307125080   
SAGE_Foreskin_normal_B_hs03053940350155278   
SAGE_Vein_normal_B_hs02376135688229874   
SAGE_Skin_Normal_B_hs02724397550150268   
SAGE_Lung_adenocarcinoma_B_1362561266   
SAGE_Breast_normal_B_gestational hyperplasia1617041858   
SAGE_Breast_Carcinoma_EPCR+_C6_IDC314208755116155   
SAGE_Breast_carcinoma_CL_MDA435C472701355   
SAGE_Skin_Cancer_B_hs02843892507107955   
SAGE_Skin_Normal_B_hs02775269789147355   
SAGE_Skin_Cancer_B_hs0280361849894352   
SAGE_Skin_Melanoma_B_hs02754128221101249   
SAGE_Bladder_Cancer_B_hs02406216426146347   
SAGE_Prostate_normal_epithelium_CS_confluent718971747   
SAGE_Skin_Normal_B_hs0278304222172847   
SAGE_Brain_medulloblastoma_B_H484574691345   
SAGE_Skin_Cancer_B_hs0283369223982544   
SAGE_Bladder_Cancer_B_hs0266424461292243   
SAGE_Breast_Carcinoma_CD24+_C1_IDC31428660494243   
SAGE_Skin_Normal_B_hs02715807686126243   
SAGE_Breast_carcinoma_CL_MCF7estradiol_10H607251239   
SAGE_Breast_carcinoma_CL_MDA435H2446631938   
SAGE_Skin_Normal_B_hs02816517089125938   
SAGE_Eye_Retinoblastoma_B_hs038912434232228536   
SAGE_Bladder_Cancer_B_hs02645833968100534   
SAGE_Breast_carcinoma_CL_MDA435H4840323734   
SAGE_Kidney_embryonic_CL_293+beta-catenin23519434   
SAGE_Thyroid_normal_B_0011159381932   
SAGE_Vein_normal_B_hs02306755622110532   
SAGE_Embryo_Pre-Cancer_B_hs03246893016103730   
SAGE_Breast_carcinoma_CL_MCF7estradiol_3h60162929   
SAGE_Liver_cholangiocarcinoma_B_K2D46853729   
SAGE_Placenta_first_trimester_normal_B_1892651329   
SAGE_Ovary_carcinoma_CL_A278021369328   
SAGE_Brain_astrocytoma_grade_III_B_R9271073441527   
SAGE_Lymph_node_Lymphoma_B_hs0204517899370027   
SAGE_Retina_macula_normal_B_HMAC21024171427   
SAGE_GallBladder_Normal_B_HN857061125   
SAGE_Brain_astrocytoma_grade_II_B_H1271144891424   
SAGE_Breast_carcinoma_associated_stroma_B_DCIS657049724   
SAGE_Breast_normal_organoid_B58181724   
SAGE_Lymph_Node_normal_B_1994261224   
SAGE_Retina_Peripheral_normal_B_21053121324   
SAGE_Brain_ependymoma_B_R51275379923   
SAGE_Brain_glioblastoma_B_H8331006001223   
SAGE_Breast_carcinoma_CL_MCF7control_0h59877723   
SAGE_Breast_normal_epithelium_BEREP4+_AP_N250512623   
SAGE_Rheumatoid_arthritis_synovial_fibroblast_CS42472523   
SAGE_Brain_medulloblastoma_B_98-05-P040892581022   
SAGE_Brain_medulloblastoma_B_H27572318822   
SAGE_Breast_Carcinoma_EPCR+_C5_IDC27379656843122   
SAGE_Stomach_normal_B_antrum26653322   
SAGE_Bone_marrow_normal_B_D0136577421   
SAGE_Brain_glioblastoma_B_H1425C88990920   
SAGE_Lung_normal_B_188708920   
SAGE_Retina_Peripheral_normal_B_159661620   
SAGE_Bladder_Cancer_B_hs0265464019844519   
SAGE_Brain_glioblastoma_B_H13531248051219   
SAGE_Placenta_hydatidiform_mole_B_11016771019   
SAGE_Brain_astrocytoma_grade_III_B_R1401187331118   
SAGE_Brain_medulloblastoma_B_98-04-P11732570318   
SAGE_Brain_medulloblastoma_B_C60974612718   
SAGE_Brain_oligodendroglioma_B_100132442318   
SAGE_Breast_carcinoma_B_CT15_IDC21840218   
SAGE_Breast_normal_myoepithelium_CL_HME5055516518   
SAGE_Liver_normal_B_166308618   
SAGE_Lymph_node_Lymphoma_B_hs0196479148144518   
SAGE_Ovary_adenocarcinoma_B_OVT-831987318   
SAGE_Peritoneum_normal_B_1353527518   
SAGE_Breast_carcinoma_B_IDC-368891617   
SAGE_Brain_astrocytoma_grade_III_B_407108312916   
SAGE_Breast_carcinoma_B_DCIS-460605516   
SAGE_Breast_phyllodes_tumor_fibroblasts_AP_07020259575516   
SAGE_Muscle_Rhabdomyosarcoma_B_161270516   
SAGE_Ovary_normal_CL_IOSE29EC-1147159416   
SAGE_Prostate_normal_epithelium_CS_senescent71717616   
SAGE_Testis_Embryonal_Carcinoma_CL_hs0213593549048916   
SAGE_Brain_Medulloblastoma_CL_425C262642515   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_PE250132415   
SAGE_Retinal_Pigment_Epithelium_normal_B_4PeriRPE90199715   
SAGE_Brain_astrocytoma_grade_III_B_H27296059714   
SAGE_Brain_astrocytoma_grade_II_B_H516108116814   
SAGE_Brain_medulloblastoma_B_97-05-P01569971514   
SAGE_Brain_normal_substantia_nigra_B_141773314   
SAGE_Breast_Carcinoma_CD24+_C4_IDC40357091025014   
SAGE_Breast_carcinoma_MD_DCIS40783314   
SAGE_Breast_carcinoma_associated_stroma_B_IDC768024514   
SAGE_Breast_normal_epithelium_CD24+_AP_N241551314   
SAGE_Liver_cholangiocarcinoma_CL_K354842414   
SAGE_Prostate_carcinoma_CL_LNCaP-C40029314   
SAGE_Breast_carcinoma_B_IDC-560451413   
SAGE_Breast_carcinoma_epithelium_BerEP4+AP_IDC773410513   
SAGE_Breast_metastatic_carcinoma_B_LN145087313   
SAGE_Placenta_normal_B_1118083813   
SAGE_Brain_astrocytoma_grade_III_B_H1055109886712   
SAGE_Brain_medulloblastoma_B_H141361853412   
SAGE_Leukocytes_normal_B_147873312   
SAGE_Peritoneum_mesothelioma_B_1232529212   
SAGE_Skin_Cancer_B_hs0279570329835112   
SAGE_Stomach_adenocarcinoma_MD_G32946802312   
SAGE_Brain_astrocytoma_grade_III_B_343100158611   
SAGE_Brain_astrocytoma_grade_II_B_H530102439611   
SAGE_Brain_ependymoblastoma_B_81933975211   
SAGE_Brain_medulloblastoma_B_98-09-P55885984511   
SAGE_Breast_carcinoma_epithelium_CD44+_AP_PE252342311   
SAGE_Breast_normal_myoepithelium_CD10+_AP_IDC769006411   
SAGE_Liver_cholangiocarcinoma_CL_K452973311   
SAGE_Retina_Macula_normal_B_4Mac101417611   
SAGE_Skin_Normal_B_hs0282441163624911   
SAGE_White_Blood_Cells_breast_carcinoma_associated_CD45+_AP_IDC734399211   
SAGE_Brain_medulloblastoma_B_127338614210   
SAGE_Brain_medulloblastoma_B_97-05-P31274295410   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES1151735810   
SAGE_Prostate_normal_MD_PR31759277310   
SAGE_Uterus_Normal_B_hs0194645262333710   
SAGE_Vascular_endothelium_hemangioma_B_14675680410   
SAGE_Vascular_endothelium_normal_liver_associated_AP_NLEC177759410   
SAGE_Brain_astrocytoma_grade_II_B_H35910576459   
SAGE_Brain_medulloblastoma_B_98-04-P4944306829   
SAGE_Brain_medulloblastoma_B_H9728537649   
SAGE_Breast_carcinoma_B_DCIS-54309829   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC76509139   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC96353939   
SAGE_Ovary_adenocarcinoma_B_OVT-64144329   
SAGE_Prostate_normal_B_26405839   
SAGE_Retina_Peripheral_normal_B_4Peri12669169   
SAGE_Retina_normal_B_4cRet10370159   
SAGE_Stomach_carcinoma_B_G1896307539   
SAGE_White_Blood_Cells_monocyte_normal_AP_P110115859   
SAGE_Brain_Medulloblastoma_CL_425Otx2siRNA9729148   
SAGE_Brain_glioblastoma_B_H13714933828   
SAGE_Brain_medulloblastoma_B_DL76839238   
SAGE_Breast_carcinoma_B_95-3476707038   
SAGE_Breast_carcinoma_MD_LCIS6783438   
SAGE_Embryonic_stem_cell_H1_normal_p31_CL_SHE17276203128   
SAGE_Pancreas_adenocarcinoma_CL_Panc12474918   
SAGE_Stomach_normal_MD_13S4590828   
SAGE_Stomach_normal_epithelium_B_body12476118   
SAGE_Testis_Embryonal_Carcinoma_CL_hs021263701612778   
SAGE_Brain_ependymoma_B_13945631427   
SAGE_Brain_ependymoma_B_R4555182527   
SAGE_Brain_ependymoma_B_R5825218927   
SAGE_Brain_glioblastoma_CL_28d11062447   
SAGE_Brain_medulloblastoma_B_96-04-P0195264527   
SAGE_Breast_carcinoma_B_BWHT18_DCIS5070127   
SAGE_Muscle_normal_B_young5394727   
SAGE_Ovary_adenocarcinoma_B_OVT-75351427   
SAGE_Ovary_cystadenoma_CL_ML10-105514427   
SAGE_Spinal_cord_normal_B_15478527   
SAGE_Stomach_carcinoma_B_xenograph_X435162027   
SAGE_Universal_reference_human_RNA_CL5172927   
SAGE_White_Blood_Cells_monocytes_normal_AP_P25442627   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P25029727   
SAGE_Brain_astrocytoma_grade_II_B_H51811602246   
SAGE_Brain_glioblastoma_B_R709909936   
SAGE_Brain_glioblastoma_CL_4d11521246   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC86652026   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N15722226   
SAGE_Colon_adenocarcinoma_CL_Caco26068226   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES2401432146   
SAGE_Eye_lens_B_UIHI08589836   
SAGE_Ovary_carcinoma_CL_ES2-13115916   
SAGE_Pancreas_carcinoma_CL_ASPC3122416   
SAGE_Prostate_carcinoma_B_pool26603426   
SAGE_Stomach_adenocarcinoma_MD_HG79371436   
SAGE_White_Blood_Cells_monocyte_normal_AP_A19991336   
SAGE_Brain_astrocytoma_grade_III_B_43910782435   
SAGE_Brain_astrocytoma_grade_III_B_58410300835   
SAGE_Brain_astrocytoma_grade_III_B_H97010698235   
SAGE_Brain_fetal_normal_B_S130554685   
SAGE_Brain_normal_peds_cortex_B_H15717755425   
SAGE_Breast_carcinoma_B_95-2593936415   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_IDC263936115   
SAGE_Embryonic_stem_cell_BG01_normal_p20_CL_SHE1920166865   
SAGE_GallBladder_Adenocarcinoma_B_NAM017854825   
SAGE_Lung_adenocarcinoma_MD_L93591615   
SAGE_Lymph_Node_Lymphoma_B_17200825   
SAGE_Pancreas_adenocarcinoma_B_91-161133358215   
SAGE_Retinal_Pigment_Epithelium_normal_B_4MacRPE7726225   
SAGE_Stomach_carcinoma_B_xenograft_X1016974925   
SAGE_Stomach_normal_MD_14S7335325   
SAGE_Thyroid_follicular_adenoma_B_TT00510157835   
SAGE_Uterus_normal_B_hs019537184631045   
SAGE_White_Blood_Cells_monocytes_normal_AP_C110165635   
SAGE_Brain_Medulloblastoma_CL_UW228-V28082724   
SAGE_Brain_astrocytoma_grade_III_B_8289993924   
SAGE_Brain_astrocytoma_grade_II_B_H5638856824   
SAGE_Brain_glioblastoma_CS_TA24667814   
SAGE_Brain_medulloblastoma_B_DL58367124   
SAGE_Brain_medulloblastoma_CL_H3414392014   
SAGE_Brain_medulloblastoma_CL_mhh-14785814   
SAGE_Brain_meningioma_grade_II_B_SF21764871114   
SAGE_Brain_meningioma_grade_II_B_SF36224485714   
SAGE_Brain_normal_cerebellum_B_BB5424050014   
SAGE_Brain_normal_cortex_B_BB5429423324   
SAGE_Breast_Carcinoma_CD24+_C3_IDC384117410894   
SAGE_Breast_carcinoma_associated_myoepithelium_CD10+_AP_DCIS68145224   
SAGE_Breast_normal_epithelium_BEREP4+_AP_N14872914   
SAGE_Breast_normal_epithelium_CD24+_AP_N154143014   
SAGE_Embryonic_stem_cell_H13_normal_p22_CL_SHE1522110154   
SAGE_GallBladder_Adenocarcinoma_B_C018138024   
SAGE_Kidney_Glomeruli_Normal_B_bjballer14890514   
SAGE_Kidney_embryonic_CL_293-control4195514   
SAGE_Lung_normal_CL_L154222614   
SAGE_Brain_astrocytoma_grade_III_B_H10205157313   
SAGE_Brain_astrocytoma_grade_II_B_H38810628523   
SAGE_Brain_ependymoma_B_11506237313   
SAGE_Brain_glioblastoma_B_R2010105323   
SAGE_Brain_glioblastoma_CL_stem_cells10841423   
SAGE_Brain_glioblastoma_control_CL_H2476042813   
SAGE_Breast_Carcinoma_SSEA4+_C7_IDC403381240513   
SAGE_Breast_carcinoma_B_IDC-46409513   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC96593513   
SAGE_Breast_fibroadenoma_MD5568813   
SAGE_Breast_normal_epithelium_CD44+_AP_N25600813   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N156399413   
SAGE_Breast_normal_stroma_B_IDC85048513   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGD010986223   
SAGE_Colon_adenocarcinoma_CL_RKO5129413   
SAGE_Colon_adenocarcinoma_CL_SW8376114813   
SAGE_Embryonic_stem_cell_HES3_normal_p16_CL_SHE1020535343   
SAGE_Embryonic_stem_cell_HSF6_normal_p50_CL_SHES922448843   
SAGE_Liver_cholangiocarcinoma_B_K16031913   
SAGE_Muscle_normal_B_old5388913   
SAGE_Prostate_adenocarcinoma_MD_PR3176495113   
SAGE_Retina_Pigment_epithelium_normal_B_15366613   
SAGE_Skin_Melanoma_B_hs027656318001043   
SAGE_Stomach_adenocarcinoma_MD_HS295883113   
SAGE_Testis_Embyronal_Carcinoma_B_16635213   
SAGE_Vascular_normal_CS_control5164213   
SAGE_White_Blood_Cells_lung_macrophage_normal_AP_L15187213   
SAGE_White_Blood_Cells_monocyte_depleted_mononuclear_cells_normal_AP_P15163413   
SAGE_Bone_marrow_normal_AP_CD34+/CD38+/lin+8159512   
SAGE_Bone_marrow_normal_AP_CD34+/CD38-/lin-8639112   
SAGE_Brain_ependymoma_B_H5806861412   
SAGE_Brain_ependymoma_B_R5108407312   
SAGE_Brain_glioblastoma_hypoxia_CL_H2477176512   
SAGE_Brain_medulloblastoma_B_H8766740412   
SAGE_Breast_carcinoma_epithelium_X_MUC1+_AP7514712   
SAGE_Breast_normal_epithelium_CD24+_AP_N57646912   
SAGE_Breast_normal_epithelium_MUC1+_AP_N157170412   
SAGE_Breast_normal_epithelium_MUC1+_AP_N57622712   
SAGE_Breast_normal_stroma_AP_17915212   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Normal_Oxygen7928412   
SAGE_Colon_carcinoma_CL_Hct116_wildtype_p53_Normal_Oxygen8039812   
SAGE_Embryonic_stem_cell_H1_normal_p54_CL_SHE1621821432   
SAGE_Esophagus_Dysplasia_B_HGD027861112   
SAGE_Esophagus_Dysplasia_B_LGD017490412   
SAGE_GallBladder_Adenocarcinoma_B_HAIIb6698812   
SAGE_Lung_adenocarcinoma_MD_L108688712   
SAGE_Retina_Retinoblastoma_B_18849012   
SAGE_White_Blood_Cells_monocytes_normal_AP_A29878612   
SAGE_Bone_Marrow_Normal_FS_hs04044842547351   
SAGE_Brain_astrocytoma_grade_II_B_H50112830911   
SAGE_Brain_glioblastoma_B_R33610232211   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P110287311   
SAGE_Bone_Marrow_Cancer_FS_hs04054900037200   
SAGE_Breast_Carcinoma_CD24+_C2_IDC34472096050   
SAGE_Breast_Normal_Epithelium_CD24+_N1_N33964688020   
SAGE_Breast_Normal_Epithelium_CD24+_N2_N351358422320   
SAGE_Breast_Normal_Epithelium_CD24+_N3_N47303600210   
SAGE_Breast_Normal_Epithelium_CD44+_N7_N5811007864210   
SAGE_Embryonic_stem_cell_H14_normal_p22_CL_SHE1421217010