Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
SAGE Genie
  • Human SAGE Genie Tools
  • Downloads
  • Digital Karyotyping
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Digital Northern Results

Search query: GTTTCTGCAA

Color Code                              
Tags per 200,000 <2 <4 <8 <16 <32 <64 <128 <256 <512 >512

LibraryTotal Tags
in Library
Tag CountsTags per
200,000
Color
Code
SAGE_Retina_normal_B_4cRet1037014382   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_IDC26393611681   
SAGE_Skin_Melanoma_B_hs02743895211144774   
SAGE_Skin_Normal_B_hs02783042221108371   
SAGE_Brain_medulloblastoma_B_H972853763070   
SAGE_GallBladder_Adenocarcinoma_B_HAIIb669882368   
SAGE_Skin_Melanoma_B_hs02733881770126865   
SAGE_Breast_carcinoma_B_BWHT18_DCIS507011455   
SAGE_Breast_fibroadenoma_MD556881450   
SAGE_Stomach_carcinoma_B_xenograph_X43516201350   
SAGE_Brain_medulloblastoma_B_97-05-P015699711748   
SAGE_Urothelium_normal_B_hs0239311430774247   
SAGE_Peripheral_Blood_Cancer_B_hs04295756848130945   
SAGE_Brain_medulloblastoma_B_H876674041544   
SAGE_Kidney_Glomeruli_Normal_B_bjballer1489051144   
SAGE_Brain_medulloblastoma_B_H1322594981343   
SAGE_Foreskin_normal_B_hs0305394035085243   
SAGE_Breast_carcinoma_B_DCIS-543098941   
SAGE_Pancreas_adenocarcinoma_CL_Panc124749540   
SAGE_Breast_metastatic_carcinoma_B_LN145087939   
SAGE_Bladder_Cancer_B_hs0265464019888238   
SAGE_Embryo_Pre-Cancer_B_hs03246893016133438   
SAGE_Retina_Retinoblastoma_B_1884901738   
SAGE_Breast_carcinoma_B_CT15_IDC21840436   
SAGE_Skin_Normal_B_hs0272439755080536   
SAGE_Muscle_Rhabdomyosarcoma_B_1612701135   
SAGE_Skin_Normal_B_hs02715807686104435   
SAGE_Kidney_embryonic_CL_293+beta-catenin23519434   
SAGE_Skin_Normal_B_hs0277526978990134   
SAGE_Skin_Normal_B_hs02816517089111834   
SAGE_Breast_carcinoma_epithelium_PROCR+_AP_IDC2954080933   
SAGE_Lymph_Node_Lymphoma_B_1720081233   
SAGE_Uterus_Normal_B_hs01946452623109033   
SAGE_Brain_ependymoma_B_R353738221232   
SAGE_GallBladder_Normal_B_HN857061432   
SAGE_Lymph_Node_normal_B_1994261632   
SAGE_Bladder_Cancer_B_hs0264583396890631   
SAGE_Bladder_Cancer_B_hs0266424461267031   
SAGE_Breast_Carcinoma_EPCR+_C5_IDC27379656860031   
SAGE_Eye_Retinoblastoma_B_hs038912434232195231   
SAGE_Pancreas_normal_CS_HX31985531   
SAGE_Bladder_Cancer_B_hs0241333580151030   
SAGE_Brain_glioblastoma_B_GBM106259762930   
SAGE_Brain_medulloblastoma_B_96-04-P01952645830   
SAGE_Brain_normal_peds_cortex_B_H1571775541230   
SAGE_Breast_carcinoma_B_95-25939364630   
SAGE_Breast_carcinoma_MD_DCIS40783629   
SAGE_Retina_macula_normal_B_HMAC21024171529   
SAGE_Vascular_endothelium_hemangioma_B_146756801129   
SAGE_Brain_fetal_normal_B_S13055464428   
SAGE_Brain_glioblastoma_B_H137149338728   
SAGE_Brain_normal_substantia_nigra_B_141773628   
SAGE_Breast_Carcinoma_SSEA4+_C7_IDC40338124048928   
SAGE_Skin_Normal_B_hs0282441163662128   
SAGE_Embryonic_stem_cell_HES4_normal_p36_CL_SHE112092322927   
SAGE_Skin_Cancer_B_hs0280361849849327   
SAGE_Uterus_normal_B_hs0195371846351227   
SAGE_Brain_ependymoma_B_R58252189726   
SAGE_Breast_carcinoma_B_IDC-368891926   
SAGE_Embryonic_stem_cell_normal_CL_hs0238363608349026   
SAGE_Pancreas_adenocarcinoma_CL_CAPAN137674526   
SAGE_White_Blood_Cells_monocyte_depleted_mononuclear_cells_normal_AP_A153795726   
SAGE_Bladder_Cancer_B_hs0240621642678025   
SAGE_Brain_glioblastoma_B_R3361023221325   
SAGE_Breast_Carcinoma_CD24+_C4_IDC40357091045425   
SAGE_Leukocytes_normal_B_147873625   
SAGE_Liver_cholangiocarcinoma_B_K2D46853625   
SAGE_Placenta_hydatidiform_mole_B_11016771325   
SAGE_Retinal_Pigment_Epithelium_normal_B_4MacRPE772621025   
SAGE_Skin_Cancer_B_hs0279570329873425   
SAGE_Skin_Melanoma_B_hs0275412822152725   
SAGE_Thyroid_follicular_adenoma_B_TT0051015781325   
SAGE_White_Blood_Cells_normal_breast_associated_CD45+_AP31985425   
SAGE_Brain_medulloblastoma_B_98-04-P11732570424   
SAGE_Brain_medulloblastoma_B_C60974612924   
SAGE_Brain_medulloblastoma_B_H27572318924   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_IDC2857956724   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGP01083191324   
SAGE_Brain_astrocytoma_grade_III_B_H10551098861323   
SAGE_Brain_medulloblastoma_B_98-04-P49443068523   
SAGE_Brain_medulloblastoma_B_H30660454723   
SAGE_Brain_normal_cerebellum_B_150385623   
SAGE_Breast_carcinoma_CL_MCF7estradiol_10H60725723   
SAGE_Breast_carcinoma_epithelium_X_MUC1+_AP75147923   
SAGE_Skin_Cancer_B_hs0283369223944323   
SAGE_Vascular_endothelium_normal_liver_associated_AP_NLEC177759923   
SAGE_Vein_normal_B_hs0230675562278723   
SAGE_Vein_normal_B_hs0237613568872323   
SAGE_Brain_astrocytoma_grade_II_B_H5161081161222   
SAGE_Brain_normal_leptomeninges_B_AL272473822   
SAGE_Breast_carcinoma_epithelium_CD44+_AP_ASC352478622   
SAGE_Breast_carcinoma_myoepithelium_X_ITGB6+_AP78785922   
SAGE_Embryonic_stem_cell_H7_normal_p33_CL_SHE132724653022   
SAGE_Esophagus_Dysplasia_B_HGD0278611922   
SAGE_GallBladder_Adenocarcinoma_B_NAM0178548922   
SAGE_Peritoneum_normal_B_1353527622   
SAGE_Retina_Peripheral_normal_B_21053121222   
SAGE_Retina_Peripheral_normal_B_4Peri1266911422   
SAGE_Skin_Cancer_B_hs0284389250744022   
SAGE_Stomach_carcinoma_B_G18963075722   
SAGE_Brain_astrocytoma_grade_II_B_H5301024391121   
SAGE_Brain_ependymoma_B_23946653521   
SAGE_Brain_glioblastoma_B_R201010531121   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC873967821   
SAGE_Peripheral_Blood_Cancer_B_hs0430639970567521   
SAGE_Spinal_cord_normal_B_154785621   
SAGE_Brain_astrocytoma_grade_II_B_H1271144891220   
SAGE_Brain_medulloblastoma_B_127338614420   
SAGE_Brain_medulloblastoma_CL_mhh-147858520   
SAGE_Brain_meningioma_grade_III_B_SF236659786620   
SAGE_Breast_carcinoma_B_95-34767070720   
SAGE_Breast_normal_epithelium_CD24+_AP_N576469820   
SAGE_Ovary_normal_CS_HOSE_447728520   
SAGE_Placenta_normal_B_11180831220   
SAGE_Prostate_carcinoma_CL_PC3_Mock38819420   
SAGE_Stomach_adenocarcinoma_MD_HS2958831620   
SAGE_Brain_Medulloblastoma_CL_UW228-V280827819   
SAGE_Brain_glioblastoma_B_H8331006001019   
SAGE_Brain_normal_cerebellum_B_BB54240500419   
SAGE_Breast_Carcinoma_CD24+_C2_IDC34472096046819   
SAGE_Breast_carcinoma_B_DCIS-460605619   
SAGE_Breast_carcinoma_B_IDC-560451619   
SAGE_Breast_normal_epithelium_BEREP4+_AP_N250512519   
SAGE_Ovary_carcinoma_CL_ES2-131159319   
SAGE_Brain_astrocytoma_grade_III_B_R1401187331118   
SAGE_Brain_meningioma_grade_I_B_SF446554647518   
SAGE_Embryonic_stem_cell_H14_normal_p22_CL_SHE142121702018   
SAGE_Embryonic_stem_cell_HES3_normal_p16_CL_SHE102053531918   
SAGE_Esophagus_Adenocarcinoma_B_CA1D73793718   
SAGE_Fibroblasts_CL_postcrisis21833218   
SAGE_Pancreas_normal_B_121520218   
SAGE_Pancreas_normal_CS_H12632223318   
SAGE_Vascular_endothelium_breast_carcinoma_associated_P1H12+_AP_DCIS665314618   
SAGE_Brain_astrocytoma_grade_III_B_584103008917   
SAGE_Brain_astrocytoma_grade_II_B_H5181160221017   
SAGE_Brain_ependymoma_B_H58068614617   
SAGE_Brain_glioblastoma_B_H1425C88990817   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N157222517   
SAGE_Embryonic_stem_cell_BG01_normal_p20_CL_SHE192016681817   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES24014323517   
SAGE_Thyroid_follicular_carcinoma_B_TT0041246641117   
SAGE_Bone_Marrow_AML_FS_CD34+CD38+61519516   
SAGE_Brain_Medulloblastoma_CL_UW228-N94937816   
SAGE_Brain_astrocytoma_grade_III_B_407108312916   
SAGE_Brain_ependymoma_B_R51084073716   
SAGE_Brain_normal_cortex_B_pool662451516   
SAGE_Brain_normal_thalamus_B_124015216   
SAGE_Breast_carcinoma_metastasis_B_249794416   
SAGE_Breast_metastatic_carcinoma_B_LN260343516   
SAGE_Breast_normal_epithelium_MUC1+_AP_N1571704616   
SAGE_Embryonic_stem_cell_H13_normal_p22_CL_SHE152211011816   
SAGE_Embryonic_stem_cell_H1_normal_p54_CL_SHE162182141816   
SAGE_Brain_astrocytoma_grade_III_B_343100158815   
SAGE_Brain_astrocytoma_grade_II_B_H56388568715   
SAGE_Breast_carcinoma_associated_myoepithelium_CD10+_AP_DCIS751993415   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC963539515   
SAGE_Breast_carcinoma_epithelium_CD44+_AP_PE252342415   
SAGE_Breast_carcinoma_epithelium_PROCR+_AP_IDC2852781415   
SAGE_Breast_normal_epithelium_MUC1+_AP_N576227615   
SAGE_Skin_Melanoma_B_hs0276563180044815   
SAGE_Testis_Embryonal_Carcinoma_CL_hs0212637016150015   
SAGE_White_Blood_Cells_monocyte_depleted_mononuclear_cells_normal_AP_P151634415   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P1102873815   
SAGE_Brain_astrocytoma_grade_III_B_H970106982814   
SAGE_Brain_astrocytoma_grade_III_B_R927107344814   
SAGE_Brain_glioblastoma_B_R7099099714   
SAGE_Brain_medulloblastoma_B_DL768392514   
SAGE_Brain_oligodendroglioma_B_H98827864214   
SAGE_Breast_Carcinoma_CD24+_C1_IDC31428660430114   
SAGE_Breast_Carcinoma_CD24+_C3_IDC38411741029114   
SAGE_Breast_Carcinoma_EPCR+_C6_IDC31420875530114   
SAGE_Breast_carcinoma_CL_ZR75_1_tamoxifen40052314   
SAGE_Breast_carcinoma_MD_LCIS67834514   
SAGE_Breast_normal_epithelium_CD24+_AP_N241551314   
SAGE_Ovary_adenocarcinoma_B_OVT-641443314   
SAGE_Stomach_carcinoma_B_xenograft_X10169749514   
SAGE_Brain_medulloblastoma_B_98-05-P04089258613   
SAGE_Brain_medulloblastoma_B_98-09-P55885984613   
SAGE_Brain_medulloblastoma_B_98-13-P30145342313   
SAGE_Breast_carcinoma_CL_MCF7estradiol_3h60162413   
SAGE_Pancreas_carcinoma_CL_PL4529557213   
SAGE_Retina_Macula_normal_B_4Mac101417713   
SAGE_Stomach_normal_MD_13S45908313   
SAGE_Brain_astrocytoma_grade_III_B_82899939612   
SAGE_Brain_medulloblastoma_B_98-05-P60848451312   
SAGE_Brain_oligodendroglioma_B_100132442212   
SAGE_Breast_carcinoma_B_IDC-464095412   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC866520412   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N1563994412   
SAGE_Lymph_node_Lymphoma_B_hs0204517899332812   
SAGE_Prostate_adenocarcinoma_MD_PR31764951412   
SAGE_Testis_Embyronal_Carcinoma_B_166352412   
SAGE_Thyroid_normal_B_001115938712   
SAGE_White_Blood_Cells_monocyte_normal_AP_A199913612   
SAGE_Brain_glioblastoma_CL_H54+LacZ66908411   
SAGE_Breast_carcinoma_associated_stroma_B_IDC768024411   
SAGE_Colon_adenocarcinoma_CL_RKO51294311   
SAGE_Lung_adenocarcinoma_MD_L1086887511   
SAGE_Lung_normal_B_188708511   
SAGE_Ovary_adenocarcinoma_B_OVT-753514311   
SAGE_Brain_astrocytoma_grade_III_B_H27296059510   
SAGE_Brain_glioblastoma_CL_28d110624610   
SAGE_Brain_normal_cortex_B_BB54294233510   
SAGE_Breast_normal_epithelium_CD44+_AP_N256008310   
SAGE_Breast_normal_organoid_B58181310   
SAGE_Breast_normal_stroma_AP_179152410   
SAGE_Embryonic_stem_cell_H1_normal_p31_CL_SHE172762031510   
SAGE_Ovary_cystadenoma_CL_ML10-1055144310   
SAGE_Prostate_normal_MD_PR31759277310   
SAGE_Retina_Peripheral_normal_B_159661310   
SAGE_Skin_normal_B_NS36615210   
SAGE_Vascular_endothelium_normal_breast_associated_P1H12+_AP_157023310   
SAGE_Brain_Medulloblastoma_CL_425C26264239   
SAGE_Brain_astrocytoma_grade_II_B_H35910576459   
SAGE_Brain_ependymoma_B_11506237339   
SAGE_Brain_ependymoma_B_R102312269069   
SAGE_Brain_glioblastoma_B_H135312480569   
SAGE_Brain_glioblastoma_CL_stem_cells10841459   
SAGE_Brain_medulloblastoma_B_H14136185339   
SAGE_Breast_carcinoma_associated_myoepithelium_CD10+_AP_DCIS68145249   
SAGE_Breast_normal_B_gestational hyperplasia16170439   
SAGE_Breast_normal_epithelium_CD24+_AP_N154143029   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGD010986259   
SAGE_Colon_carcinoma_CL_Hct116_wildtype_p53_Normal_Oxygen8039849   
SAGE_Heart_normal_B_18306349   
SAGE_Liver_normal_B_16630839   
SAGE_Prostate_carcinoma_CL_LNCaP-C4002929   
SAGE_Rheumatoid_arthritis_synovial_fibroblast_CS4247229   
SAGE_Testis_Embryonal_Carcinoma_CL_hs021359354902809   
SAGE_Brain_glioblastoma_B_H11106898638   
SAGE_Brain_glioblastoma_CS_TA24667828   
SAGE_Breast_carcinoma_CL_MDA435C4727028   
SAGE_Breast_normal_epithelium_BEREP4+_AP_N14872928   
SAGE_Placenta_first_trimester_normal_B_18926548   
SAGE_Retinal_Pigment_Epithelium_normal_B_4PeriRPE9019948   
SAGE_Stomach_normal_MD_14S7335338   
SAGE_Stomach_normal_epithelium_B_body12476118   
SAGE_Brain_astrocytoma_grade_III_B_43910782447   
SAGE_Brain_astrocytoma_grade_III_B_H10205157327   
SAGE_Brain_astrocytoma_grade_II_B_H50112830957   
SAGE_Brain_ependymoma_B_13945631427   
SAGE_Brain_ependymoma_B_R5127537937   
SAGE_Brain_glioblastoma_B_pooled5642827   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_PE25013227   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Anoxia7905337   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Normal_Oxygen7928437   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES115173567   
SAGE_Embryonic_stem_cell_HSF6_normal_p50_CL_SHES922448887   
SAGE_Stomach_normal_B_antrum2665317   
SAGE_White_Blood_Cells_lung_macrophage_normal_AP_L15187227   
SAGE_White_Blood_Cells_monocyte_normal_AP_P110115847   
SAGE_White_Blood_Cells_monocytes_normal_AP_P25442627   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P25029727   
SAGE_Brain_ependymoma_B_R62812043146   
SAGE_Brain_glioblastoma_control_CL_H2476042826   
SAGE_Brain_medulloblastoma_CL_4-HCR6659926   
SAGE_Brain_medulloblastoma_CL_D2836631626   
SAGE_Breast_carcinoma_CL_MCF7control_0h5987726   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC76509126   
SAGE_Ovary_adenocarcinoma_B_OVT-83198716   
SAGE_Pancreas_adenocarcinoma_B_96-62523321316   
SAGE_Pancreas_carcinoma_CL_ASPC3122416   
SAGE_Peritoneum_mesothelioma_B_123252916   
SAGE_Prostate_carcinoma_B_pool26603426   
SAGE_Stomach_adenocarcinoma_B_G2346492526   
SAGE_White_Blood_Cells_monocytes_normal_AP_A29878636   
SAGE_Bone_Marrow_Cancer_FS_hs040549000371455   
SAGE_Bone_marrow_normal_B_D013657715   
SAGE_Brain_astrocytoma_grade_II_B_H38810628535   
SAGE_Brain_ependymoblastoma_B_8193397515   
SAGE_Brain_medulloblastoma_B_97-05-P3127429525   
SAGE_Breast_Normal_Epithelium_CD44+_N7_N58110078643005   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS67285725   
SAGE_Breast_carcinoma_epithelium_BerEP4+AP_IDC77341025   
SAGE_Breast_normal_FS_NER3456515   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIEK03774715   
SAGE_Esophagus_Normal_B_CN017563425   
SAGE_Lung_adenocarcinoma_B_13625615   
SAGE_Lung_adenocarcinoma_MD_L93591615   
SAGE_Ovary_endometriosis_CL_E127609725   
SAGE_Pancreas_adenocarcinoma_B_91-161133358215   
SAGE_White_Blood_Cells_breast_carcinoma_associated_CD45+_AP_IDC73439915   
SAGE_White_Blood_Cells_monocytes_normal_AP_C110165635   
SAGE_Bone_marrow_normal_AP_CD34+/CD38+/lin+8159524   
SAGE_Bone_marrow_normal_AP_CD34+/CD38-/lin-8639124   
SAGE_Brain_Medulloblastoma_CL_425Otx2siRNA9729124   
SAGE_Brain_medulloblastoma_B_DL58367124   
SAGE_Brain_meningioma_grade_II_B_SF21764871114   
SAGE_Breast_carcinoma_CL_MDA435H484032314   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS78918424   
SAGE_Breast_normal_epithelium_CD44+_AP_N58046424   
SAGE_Colon_adenocarcinoma_B_Tu984137114   
SAGE_Colon_normal_B_NC24847914   
SAGE_Kidney_embryonic_CL_293-control4195514   
SAGE_Kidney_normal_B_14099314   
SAGE_Prostate_carcinoma_CL_LNCaP-T4354214   
SAGE_Brain_astrocyte_normal_CL_NHA55148113   
SAGE_Brain_ependymoma_B_R4555182513   
SAGE_Brain_glioblastoma_CL_4d11521223   
SAGE_Brain_glioblastoma_CL_H54+EGFRvIII5698213   
SAGE_Brain_medulloblastoma_B_H4845746913   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS-26616813   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC96593513   
SAGE_Breast_normal_myoepithelium_CL_HME505551613   
SAGE_Breast_phyllodes_tumor_fibroblasts_AP_0702025957513   
SAGE_Colon_adenocarcinoma_CL_Caco26068213   
SAGE_Colon_adenocarcinoma_CL_HCT1165564113   
SAGE_Liver_cholangiocarcinoma_CL_K45297313   
SAGE_Prostate_carcinoma_CL_LNCaP_no-DHT6216013   
SAGE_Universal_reference_human_RNA_CL5172913   
SAGE_Vascular_normal_CS_control5164213   
SAGE_White_Blood_Cells_breast_carcinoma_associated_CD45+_AP_DCIS66617613   
SAGE_Bone_Marrow_Normal_FS_hs04044842547682   
SAGE_Brain_astrocytoma_grade_I_B_H10437592212   
SAGE_Brain_meningioma_grade_I_B_SF42716925312   
SAGE_Breast_Normal_Epithelium_CD24+_N4_N481802274262   
SAGE_Cartilage_chondrosarcoma_grade_2_CL_UIFU07501912   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIFK08594412   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGX08843912   
SAGE_Colon_carcinoma_CL_Hct116_wildtype_p53_Anoxia7901512   
SAGE_Esophagus_Dysplasia_B_LGD017490412   
SAGE_Eye_lens_B_UIHI08589812   
SAGE_Lymph_node_Lymphoma_B_hs01964791481542   
SAGE_Stomach_adenocarcinoma_MD_HG79371412   
SAGE_Breast_Normal_Epithelium_CD24+_N3_N473036002231   
SAGE_Kidney_carcinoma_B_D210028111   
SAGE_Breast_Normal_Epithelium_CD24+_N1_N339646880100   
SAGE_Breast_Normal_Epithelium_CD24+_N2_N3513584223420   
SAGE_Breast_Normal_Epithelium_CD44+_N5_N47189093840