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Cancer Genome Characterization Initiative

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SAGE_Brain_Medulloblastoma_CL_UW228-V2808271024   
SAGE_Brain_Medulloblastoma_CL_UW228-N949371123   
SAGE_White_Blood_Cells_monocyte_depleted_mononuclear_cells_normal_AP_A153795622   
SAGE_Breast_carcinoma_CL_ZR75_1_estrogen38797420   
SAGE_Brain_normal_cerebellum_B_150385519   
SAGE_Brain_astrocytoma_grade_II_B_H56388568818   
SAGE_Spinal_cord_normal_B_154785518   
SAGE_Brain_glioblastoma_CL_28d110624916   
SAGE_Brain_glioblastoma_CL_stem_cells108414916   
SAGE_Breast_carcinoma_CL_MCF7estradiol_10H60725516   
SAGE_Universal_reference_human_RNA_CL51729415   
SAGE_Brain_normal_cerebellum_B_BB54240500314   
SAGE_Brain_glioblastoma_CL_4d115212813   
SAGE_Brain_meningioma_grade_III_B_SF236659786413   
SAGE_Brain_normal_leptomeninges_B_AL272473513   
SAGE_Brain_astrocytoma_grade_III_B_H1055109886712   
SAGE_Brain_astrocytoma_grade_II_B_H516108116712   
SAGE_Brain_ependymoma_B_23946653312   
SAGE_Brain_medulloblastoma_B_98-04-P11732570212   
SAGE_Brain_meningioma_grade_II_B_SF217648711312   
SAGE_Brain_normal_cortex_B_BB54294233612   
SAGE_Breast_Normal_Epithelium_CD24+_N2_N351358422385912   
SAGE_Breast_carcinoma_CL_ZR75_1_untreated32303212   
SAGE_Pancreas_adenocarcinoma_B_96-625233213212   
SAGE_Brain_astrocytoma_grade_III_B_439107824611   
SAGE_Brain_astrocytoma_grade_III_B_H970106982611   
SAGE_Breast_carcinoma_B_IDC-368891411   
SAGE_Breast_carcinoma_epithelium_PROCR+_AP_IDC2852781311   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES1151735911   
SAGE_Lung_adenocarcinoma_MD_L935916211   
SAGE_Pelvis_mixoid_chondrosarcoma_grade2_B_UIHT083577511   
SAGE_Testis_Embryonal_Carcinoma_CL_hs0212637016137111   
SAGE_Brain_astrocytoma_grade_III_B_82899939510   
SAGE_Brain_astrocytoma_grade_III_B_R140118733610   
SAGE_Brain_astrocytoma_grade_II_B_H127114489610   
SAGE_Brain_medulloblastoma_B_127338614210   
SAGE_Brain_normal_peds_cortex_B_H157177554410   
SAGE_Cartilage_chondrosarcoma_grade_2_CL_UIGE077757410   
SAGE_Embryonic_stem_cell_HSF6_normal_p50_CL_SHES92244881210   
SAGE_Prostate_carcinoma_CL_PC3_Mock38819210   
SAGE_Prostate_normal_MD_PR31759277310   
SAGE_Thyroid_normal_B_001115938610   
SAGE_Brain_astrocytoma_grade_III_B_40710831259   
SAGE_Brain_ependymoma_B_11506237339   
SAGE_Brain_glioblastoma_B_R2010105359   
SAGE_Brain_glioblastoma_B_R33610232259   
SAGE_Brain_medulloblastoma_CL_4-HCR6659939   
SAGE_Breast_carcinoma_CL_MDA435H484032329   
SAGE_Breast_normal_epithelium_CD24+_AP_N154143029   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGX08843949   
SAGE_Embryonic_stem_cell_H1_normal_p54_CL_SHE16218214109   
SAGE_Embryonic_stem_cell_HES3_normal_p16_CL_SHE10205353109   
SAGE_GallBladder_Adenocarcinoma_B_C018138049   
SAGE_Prostate_carcinoma_CL_LNCaP-C4002929   
SAGE_Testis_Embryonal_Carcinoma_CL_hs021359354902949   
SAGE_Testis_Embyronal_Carcinoma_B_16635239   
SAGE_Brain_ependymoma_B_R102312269058   
SAGE_Brain_ependymoma_B_R62812043158   
SAGE_Brain_fetal_normal_B_S1305546138   
SAGE_Brain_glioblastoma_B_H11106898638   
SAGE_Brain_glioblastoma_CL_H54+LacZ6690838   
SAGE_Brain_glioblastoma_hypoxia_CL_H2477176538   
SAGE_Brain_medulloblastoma_B_97-05-P3127429538   
SAGE_Brain_medulloblastoma_B_98-13-P3014534228   
SAGE_Brain_medulloblastoma_B_C6097461238   
SAGE_Breast_Normal_Epithelium_CD24+_N3_N4730360021278   
SAGE_Embryonic_stem_cell_BG01_normal_p20_CL_SHE1920166898   
SAGE_Prostate_carcinoma_B_LN-12259918   
SAGE_Retinal_Pigment_Epithelium_normal_B_4PeriRPE9019948   
SAGE_Stomach_adenocarcinoma_MD_G3294680228   
SAGE_White_Blood_Cells_monocyte_normal_AP_A19991348   
SAGE_Bone_marrow_normal_AP_CD34+/CD38+/lin+8159537   
SAGE_Brain_astrocyte_normal_CL_NHA55148127   
SAGE_Brain_astrocytoma_grade_III_B_58410300847   
SAGE_Brain_astrocytoma_grade_II_B_H35910576447   
SAGE_Brain_astrocytoma_grade_II_B_H53010243947   
SAGE_Brain_astrocytoma_grade_I_B_H10437592237   
SAGE_Brain_ependymoma_B_13945631427   
SAGE_Brain_ependymoma_B_R5108407337   
SAGE_Brain_ependymoma_B_R5825218927   
SAGE_Brain_glioblastoma_CL_H3925599027   
SAGE_Brain_medulloblastoma_B_96-04-P0195264527   
SAGE_Brain_medulloblastoma_B_H9728537637   
SAGE_Brain_oligodendroglioma_B_H9882786417   
SAGE_Breast_normal_stroma_AP_17915237   
SAGE_Breast_normal_stroma_B_IDC85048527   
SAGE_Embryonic_stem_cell_H1_normal_p31_CL_SHE17276203117   
SAGE_Embryonic_stem_cell_H7_normal_p33_CL_SHE13272465107   
SAGE_Ovary_adenocarcinoma_B_OVT-75351427   
SAGE_Retinal_Pigment_Epithelium_normal_B_4MacRPE7726237   
SAGE_Bone_marrow_normal_AP_CD34+/CD38-/lin-8639136   
SAGE_Brain_astrocytoma_grade_II_B_H50112830946   
SAGE_Brain_glioblastoma_control_CL_H2476042826   
SAGE_Brain_medulloblastoma_B_H3066045426   
SAGE_Brain_medulloblastoma_B_H4845746926   
SAGE_Brain_medulloblastoma_CL_D2836631626   
SAGE_Brain_normal_cortex_B_pool66245126   
SAGE_Breast_Normal_Epithelium_CD24+_N1_N3396468803296   
SAGE_Breast_Normal_Epithelium_CD24+_N4_N481802274586   
SAGE_Breast_Normal_Epithelium_CD44+_N6_N481048765326   
SAGE_Breast_carcinoma_CL_MCF7control_0h5987726   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC96353926   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_IDC285795626   
SAGE_Breast_normal_B_gestational hyperplasia16170426   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N156399426   
SAGE_Cartilage_chondrosarcoma_grade_1_CL_UIIC03308116   
SAGE_Colon_adenocarcinoma_CL_Caco26068226   
SAGE_Colon_adenocarcinoma_CL_SW8376114826   
SAGE_Embryonic_stem_cell_HES4_normal_p36_CL_SHE1120923276   
SAGE_Embryonic_stem_cell_normal_CL_hs023836360831116   
SAGE_Lung_adenocarcinoma_MD_L108688736   
SAGE_Lung_normal_B_18870836   
SAGE_Lung_normal_CL_L162898316   
SAGE_Muscle_Rhabdomyosarcoma_B_16127026   
SAGE_Pancreas_carcinoma_CL_PL452955716   
SAGE_Prostate_carcinoma_CL_LNCaP6025026   
SAGE_Retina_Retinoblastoma_B_18849036   
SAGE_Stomach_adenocarcinoma_B_G2346492526   
SAGE_Stomach_adenocarcinoma_MD_HS295883126   
SAGE_Uterus_normal_B_hs019537184631186   
SAGE_Vascular_normal_CS_VEGF+5731626   
SAGE_Brain_astrocytoma_grade_III_B_R92710734435   
SAGE_Brain_astrocytoma_grade_II_B_H38810628535   
SAGE_Brain_ependymoblastoma_B_8193397515   
SAGE_Brain_ependymoma_B_H5806861425   
SAGE_Brain_ependymoma_B_R3537382225   
SAGE_Brain_glioblastoma_B_H83310060035   
SAGE_Brain_medulloblastoma_B_97-05-P0156997125   
SAGE_Breast_carcinoma_B_95-3476707025   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC87396725   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIEK03774715   
SAGE_Esophagus_Dysplasia_B_HGD027861125   
SAGE_GallBladder_Adenocarcinoma_B_NAM017854825   
SAGE_Kidney_carcinoma_B_D210028135   
SAGE_Prostate_normal_epithelium_CS_senescent7171725   
SAGE_Skin_Melanoma_B_hs027438952111085   
SAGE_Thyroid_follicular_adenoma_B_TT00510157835   
SAGE_Vascular_endothelium_normal_liver_associated_AP_NLEC17775925   
SAGE_White_Blood_Cells_monocyte_normal_AP_P110115835   
SAGE_Brain_Medulloblastoma_CL_425Otx2siRNA9729124   
SAGE_Brain_astrocytoma_grade_III_B_H2729605924   
SAGE_Brain_glioblastoma_B_H135312480534   
SAGE_Brain_glioblastoma_B_H1425C8899024   
SAGE_Brain_glioblastoma_CS_TA24667814   
SAGE_Brain_normal_substantia_nigra_B_14177314   
SAGE_Breast_Carcinoma_CD24+_C4_IDC403570910824   
SAGE_Breast_Carcinoma_SSEA4+_C7_IDC403381240754   
SAGE_Breast_Normal_Epithelium_CD44+_N5_N471890938404   
SAGE_Breast_carcinoma_B_DCIS-54309814   
SAGE_Breast_metastatic_carcinoma_B_LN14508714   
SAGE_Breast_normal_epithelium_CD24+_AP_N24155114   
SAGE_Colon_normal_B_NC24847914   
SAGE_Embryonic_stem_cell_H14_normal_p22_CL_SHE1421217054   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES240143294   
SAGE_Eye_Retinoblastoma_B_hs0389124342322974   
SAGE_Eye_lens_B_UIHI08589824   
SAGE_Kidney_Glomeruli_Normal_B_bjballer14890514   
SAGE_Liver_cholangiocarcinoma_B_K2D4685314   
SAGE_Lymph_Node_normal_B_19942624   
SAGE_Lymph_node_Lymphoma_B_hs020451789931074   
SAGE_Ovary_normal_CS_HOSE_44772814   
SAGE_Prostate_carcinoma_CL_LNCaP-T4354214   
SAGE_Skin_Melanoma_B_hs02733881770794   
SAGE_Skin_Melanoma_B_hs027656318001144   
SAGE_Skin_melanoma_B_DB24133814   
SAGE_Uterus_Normal_B_hs019464526231494   
SAGE_Brain_Medulloblastoma_CL_425C26264213   
SAGE_Brain_astrocytoma_grade_III_B_34310015823   
SAGE_Brain_astrocytoma_grade_II_B_H51811602223   
SAGE_Brain_glioblastoma_CL_H54+EGFRvIII5698213   
SAGE_Brain_medulloblastoma_B_H13225949813   
SAGE_Brain_meningioma_grade_I_B_SF44655464713   
SAGE_Breast_Carcinoma_CD24+_C3_IDC384117410703   
SAGE_Breast_Normal_Epithelium_CD44+_N7_N58110078642073   
SAGE_Breast_carcinoma_B_BWHT18_DCIS5070113   
SAGE_Breast_carcinoma_B_DCIS-46060513   
SAGE_Breast_carcinoma_B_IDC-56045113   
SAGE_Breast_carcinoma_CL_MCF7estradiol_3h6016213   
SAGE_Breast_carcinoma_associated_myoepithelium_CD10+_AP_DCIS75199313   
SAGE_Breast_carcinoma_associated_stroma_B_DCIS65704913   
SAGE_Breast_carcinoma_epithelium_PROCR+_AP_IDC295408013   
SAGE_Breast_normal_epithelium_CD44+_AP_N25600813   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N15722213   
SAGE_Breast_normal_myoepithelium_CL_HME505551613   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGD010986223   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGP010831923   
SAGE_Colon_adenocarcinoma_CL_HCT1165564113   
SAGE_Embryonic_stem_cell_H13_normal_p22_CL_SHE1522110143   
SAGE_Liver_cholangiocarcinoma_B_K16031913   
SAGE_Liver_cholangiocarcinoma_CL_K35484213   
SAGE_Liver_normal_B_16630813   
SAGE_Muscle_normal_B_young5394713   
SAGE_Peritoneum_normal_B_135352713   
SAGE_Prostate_carcinoma_B_pool26603413   
SAGE_Prostate_carcinoma_CL_LNCaP_no-DHT6216013   
SAGE_Retina_Peripheral_normal_B_15966113   
SAGE_Retina_normal_B_4cRet10370123   
SAGE_Skin_Cancer_B_hs027957032981103   
SAGE_Skin_Normal_B_hs02775269789983   
SAGE_Stomach_carcinoma_B_G1896307513   
SAGE_Stomach_carcinoma_B_xenograph_X435162013   
SAGE_Thyroid_follicular_carcinoma_B_TT00412466423   
SAGE_Vascular_endothelium_normal_breast_associated_P1H12+_AP_15702313   
SAGE_Vascular_normal_CS_control5164213   
SAGE_Vein_normal_B_hs023067556221303   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P110287323   
SAGE_Bladder_Cancer_B_hs02406216426682   
SAGE_Bone_Marrow_Cancer_FS_hs04054900037602   
SAGE_Brain_glioblastoma_B_R709909912   
SAGE_Brain_medulloblastoma_B_98-09-P5588598412   
SAGE_Brain_medulloblastoma_B_DL76839212   
SAGE_Brain_medulloblastoma_B_H2757231812   
SAGE_Brain_medulloblastoma_B_H8766740412   
SAGE_Brain_meningioma_grade_I_B_SF42716925312   
SAGE_Breast_Carcinoma_CD24+_C2_IDC344720960582   
SAGE_Breast_carcinoma_associated_myoepithelium_CD10+_AP_DCIS68145212   
SAGE_Breast_carcinoma_epithelium_BerEP4+AP_IDC77341012   
SAGE_Breast_carcinoma_epithelium_X_MUC1+_AP7514712   
SAGE_Breast_normal_epithelium_CD44+_AP_N58046412   
SAGE_Breast_normal_epithelium_MUC1+_AP_N157170412   
SAGE_Breast_normal_epithelium_MUC1+_AP_N57622712   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N57617312   
SAGE_Cartilage_chondrosarcoma_grade_2_CL_UIFU07501912   
SAGE_Cartilage_chondrosarcoma_grade_3_CL_UIIA06802112   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIFK08594412   
SAGE_Esophagus_Adenocarcinoma_B_CA1D7379312   
SAGE_GallBladder_Adenocarcinoma_B_HAIIb6698812   
SAGE_Lung_tumor_associated_chronic_inflammation_B_UIHM09896212   
SAGE_Lymph_Node_Lymphoma_B_17200812   
SAGE_Lymph_node_Lymphoma_B_hs01964791481632   
SAGE_Peripheral_Blood_Cancer_B_hs04295756848852   
SAGE_Peripheral_Blood_Cancer_B_hs04306399705822   
SAGE_Placenta_first_trimester_normal_B_18926512   
SAGE_Skin_Cancer_B_hs02803618498432   
SAGE_Skin_Cancer_B_hs02833692239452   
SAGE_Skin_Normal_B_hs02816517089912   
SAGE_Skin_Normal_B_hs02824411636532   
SAGE_Stomach_carcinoma_B_xenograft_X1016974912   
SAGE_Vein_normal_B_hs02376135688662   
SAGE_Bladder_Cancer_B_hs02645833968451   
SAGE_Bladder_Cancer_B_hs02654640198451   
SAGE_Bladder_Cancer_B_hs02664244612391   
SAGE_Bone_Marrow_Normal_FS_hs04044842547391   
SAGE_Breast_Carcinoma_CD24+_C1_IDC314286604411   
SAGE_Breast_Carcinoma_EPCR+_C6_IDC314208755321   
SAGE_Embryo_Pre-Cancer_B_hs03246893016501   
SAGE_Foreskin_normal_B_hs03053940350291   
SAGE_Retina_Macula_normal_B_4Mac10141711   
SAGE_Retina_Peripheral_normal_B_4Peri12669111   
SAGE_Skin_Cancer_B_hs02843892507371   
SAGE_Skin_Melanoma_B_hs02754128221381   
SAGE_Skin_Normal_B_hs02715807686371   
SAGE_Skin_Normal_B_hs02724397550381   
SAGE_Skin_Normal_B_hs02783042221181   
SAGE_Urothelium_normal_B_hs02393114307281   
SAGE_Bladder_Cancer_B_hs02413335801140   
SAGE_Breast_Carcinoma_EPCR+_C5_IDC273796568150