Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
SAGE Genie
  • Human SAGE Genie Tools
  • Downloads
  • Digital Karyotyping
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Digital Northern Results

Search query: GTACTGTCTC

Color Code                              
Tags per 200,000 <2 <4 <8 <16 <32 <64 <128 <256 <512 >512

LibraryTotal Tags
in Library
Tag CountsTags per
200,000
Color
Code
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGX0884391431   
SAGE_Breast_normal_epithelium_MUC1+_AP_N1571704822   
SAGE_Brain_normal_cortex_B_pool662451619   
SAGE_White_Blood_Cells_monocytes_normal_AP_P254426518   
SAGE_Brain_ependymoblastoma_B_81933975317   
SAGE_Pancreas_adenocarcinoma_B_91-1611333582317   
SAGE_Breast_Normal_Epithelium_CD44+_N6_N4810487658115   
SAGE_Ovary_endometriosis_CL_E1276097615   
SAGE_Brain_glioblastoma_hypoxia_CL_H24771765513   
SAGE_Ovary_adenocarcinoma_B_OVT-831987212   
SAGE_White_Blood_Cells_monocyte_normal_AP_A199913612   
SAGE_Brain_fetal_normal_B_S13055461711   
SAGE_Breast_carcinoma_epithelium_CD44+_AP_ASC352478311   
SAGE_Vein_normal_B_hs0230675562237911   
SAGE_Brain_Medulloblastoma_CL_UW228-N94937510   
SAGE_Brain_glioblastoma_B_pooled56428310   
SAGE_Cartilage_chondrosarcoma_grade_2_CL_UIGE077757410   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Anoxia79053410   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Normal_Oxygen79284410   
SAGE_Brain_medulloblastoma_CL_4-HCR6659939   
SAGE_Brain_normal_substantia_nigra_B_14177329   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGD010986259   
SAGE_Lung_normal_CL_L154222629   
SAGE_Pelvis_mixoid_chondrosarcoma_grade2_B_UIHT08357749   
SAGE_Breast_Normal_Epithelium_CD44+_N5_N471890938798   
SAGE_Ovary_normal_CL_IOSE29EC-114715928   
SAGE_Brain_ependymoma_B_13945631427   
SAGE_Brain_glioblastoma_CL_H3925599027   
SAGE_Brain_glioblastoma_CL_H54+EGFRvIII5698227   
SAGE_Brain_normal_peds_cortex_B_H15717755437   
SAGE_Breast_Normal_Epithelium_CD24+_N3_N4730360021177   
SAGE_Breast_carcinoma_B_BWHT18_DCIS5070127   
SAGE_Breast_normal_epithelium_CD44+_AP_N25600827   
SAGE_Breast_normal_stroma_B_IDC85048527   
SAGE_Eye_Retinoblastoma_B_hs0389124342324457   
SAGE_Ovary_cystadenoma_CL_ML10-105514427   
SAGE_Vascular_normal_CS_control5164227   
SAGE_White_Blood_Cells_monocyte_depleted_mononuclear_cells_normal_AP_A15379527   
SAGE_White_Blood_Cells_monocyte_normal_AP_P110115847   
SAGE_Brain_Medulloblastoma_CL_425Otx2siRNA9729136   
SAGE_Brain_astrocytoma_grade_II_B_H51811602246   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC96593526   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N156399426   
SAGE_Embryonic_stem_cell_HES3_normal_p16_CL_SHE1020535376   
SAGE_Lung_normal_CL_L162898316   
SAGE_Ovary_carcinoma_CL_ES2-13115916   
SAGE_Pancreas_carcinoma_CL_ASPC3122416   
SAGE_Pancreas_normal_CS_HX3198516   
SAGE_Peritoneum_mesothelioma_B_123252916   
SAGE_Prostate_carcinoma_CL_LNCaP6025026   
SAGE_Brain_astrocytoma_grade_III_B_H97010698235   
SAGE_Brain_medulloblastoma_B_12733861415   
SAGE_Breast_Normal_Epithelium_CD24+_N1_N3396468802855   
SAGE_Breast_Normal_Epithelium_CD24+_N2_N35135842233585   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_IDC263936115   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIEK03774715   
SAGE_Embryonic_stem_cell_HSF6_normal_p50_CL_SHES922448865   
SAGE_Pancreas_adenocarcinoma_CL_CAPAN13767415   
SAGE_Retinal_Pigment_Epithelium_normal_B_4MacRPE7726225   
SAGE_Uterus_normal_B_hs019537184631035   
SAGE_White_Blood_Cells_breast_carcinoma_associated_CD45+_AP_IDC73439915   
SAGE_Brain_astrocytoma_grade_III_B_H2729605924   
SAGE_Brain_medulloblastoma_CL_mhh-14785814   
SAGE_Brain_meningioma_grade_II_B_SF21764871114   
SAGE_Breast_Normal_Epithelium_CD44+_N7_N58110078642594   
SAGE_Breast_carcinoma_CL_MDA435H484032314   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS78918424   
SAGE_Breast_normal_epithelium_CD24+_AP_N24155114   
SAGE_Cartilage_chondrosarcoma_grade_2_B_UIGA09384624   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIFK08594424   
SAGE_Colon_carcinoma_CL_Hct116_wildtype_p53_Normal_Oxygen8039824   
SAGE_Colon_normal_B_NC24847914   
SAGE_Embryo_Pre-Cancer_B_hs032468930161614   
SAGE_Embryonic_stem_cell_H13_normal_p22_CL_SHE1522110154   
SAGE_Eye_lens_B_UIHI08589824   
SAGE_Liver_cholangiocarcinoma_B_K2D4685314   
SAGE_Prostate_carcinoma_CL_LNCaP-T4354214   
SAGE_Skin_Normal_B_hs027752697891284   
SAGE_Stomach_adenocarcinoma_MD_G3294680214   
SAGE_Urothelium_normal_B_hs02393114307724   
SAGE_White_Blood_Cells_monocytes_normal_AP_A29878624   
SAGE_Bladder_Cancer_B_hs024062164261223   
SAGE_Brain_Medulloblastoma_CL_425C26264213   
SAGE_Brain_astrocyte_normal_CL_NHA55148113   
SAGE_Brain_astrocytoma_grade_II_B_H38810628523   
SAGE_Brain_ependymoma_B_11506237313   
SAGE_Brain_ependymoma_B_R5825218913   
SAGE_Brain_glioblastoma_CL_28d11062423   
SAGE_Brain_glioblastoma_CL_4d11521223   
SAGE_Brain_meningioma_grade_I_B_SF44655464713   
SAGE_Breast_Carcinoma_EPCR+_C5_IDC273796568613   
SAGE_Breast_carcinoma_B_IDC-46409513   
SAGE_Breast_carcinoma_B_IDC-56045113   
SAGE_Breast_carcinoma_associated_myoepithelium_CD10+_AP_DCIS75199313   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC76509113   
SAGE_Breast_carcinoma_epithelium_CD44+_AP_PE25234213   
SAGE_Breast_carcinoma_epithelium_PROCR+_AP_IDC295408013   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGP010831923   
SAGE_Colon_adenocarcinoma_B_Tu1025570013   
SAGE_Colon_adenocarcinoma_CL_Caco26068213   
SAGE_Colon_adenocarcinoma_CL_HCT1165564113   
SAGE_Colon_adenocarcinoma_CL_RKO5129413   
SAGE_Embryonic_stem_cell_normal_CL_hs02383636083663   
SAGE_Kidney_carcinoma_B_D210028123   
SAGE_Muscle_normal_B_old5388913   
SAGE_Ovary_adenocarcinoma_B_OVT-75351413   
SAGE_Peripheral_Blood_Cancer_B_hs04295756848913   
SAGE_Peripheral_Blood_Cancer_B_hs04306399705963   
SAGE_Placenta_hydatidiform_mole_B_110167723   
SAGE_Prostate_adenocarcinoma_MD_PR3176495113   
SAGE_Prostate_normal_B_26405813   
SAGE_Retina_Macula_normal_B_4Mac10141723   
SAGE_Retina_Peripheral_normal_B_15966113   
SAGE_Skin_Melanoma_B_hs02733881770753   
SAGE_Skin_Melanoma_B_hs02754128221673   
SAGE_Skin_Normal_B_hs028165170891033   
SAGE_Stomach_adenocarcinoma_MD_HS295883113   
SAGE_Testis_Embyronal_Carcinoma_B_16635213   
SAGE_Vascular_endothelium_breast_carcinoma_associated_P1H12+_AP_DCIS66531413   
SAGE_Vascular_normal_CS_VEGF+5731613   
SAGE_Vein_normal_B_hs02376135688973   
SAGE_White_Blood_Cells_lung_macrophage_normal_AP_L15187213   
SAGE_White_Blood_Cells_monocyte_depleted_mononuclear_cells_normal_AP_P15163413   
SAGE_White_Blood_Cells_monocytes_normal_AP_C110165623   
SAGE_Bladder_Cancer_B_hs02654640198572   
SAGE_Bladder_Cancer_B_hs02664244612632   
SAGE_Bone_Marrow_Cancer_FS_hs04054900037642   
SAGE_Bone_marrow_normal_AP_CD34+/CD38-/lin-8639112   
SAGE_Brain_astrocytoma_grade_I_B_H10437592212   
SAGE_Brain_ependymoma_B_R3537382212   
SAGE_Brain_ependymoma_B_R5108407312   
SAGE_Brain_glioblastoma_B_H1425C8899012   
SAGE_Brain_glioblastoma_CL_H54+LacZ6690812   
SAGE_Brain_normal_cortex_B_BB5429423312   
SAGE_Brain_normal_leptomeninges_B_AL27247312   
SAGE_Breast_Carcinoma_CD24+_C1_IDC314286604562   
SAGE_Breast_Carcinoma_CD24+_C2_IDC344720960502   
SAGE_Breast_carcinoma_associated_myoepithelium_CD10+_AP_DCIS68145212   
SAGE_Breast_carcinoma_epithelium_BerEP4+AP_IDC77341012   
SAGE_Breast_carcinoma_myoepithelium_X_ITGB6+_AP7878512   
SAGE_Breast_normal_epithelium_MUC1+_AP_N57622712   
SAGE_Cartilage_chondrosarcoma_grade_2_CL_UIFU07501912   
SAGE_Embryonic_stem_cell_H7_normal_p33_CL_SHE1327246532   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES240143262   
SAGE_Esophagus_Dysplasia_B_HGD027861112   
SAGE_Foreskin_normal_B_hs03053940350432   
SAGE_GallBladder_Adenocarcinoma_B_NAM017854812   
SAGE_Heart_normal_B_18306312   
SAGE_Lung_tumor_associated_chronic_inflammation_B_UIHM09896212   
SAGE_Lymph_Node_normal_B_19942612   
SAGE_Prostate_normal_epithelium_CS_confluent7189712   
SAGE_Skin_Melanoma_B_hs02743895211422   
SAGE_Skin_Normal_B_hs02783042221322   
SAGE_Skin_Normal_B_hs02824411636612   
SAGE_Uterus_Normal_B_hs01946452623852   
SAGE_Bladder_Cancer_B_hs02645833968331   
SAGE_Brain_astrocytoma_grade_III_B_40710831211   
SAGE_Brain_astrocytoma_grade_II_B_H50112830911   
SAGE_Brain_ependymoma_B_R62812043111   
SAGE_Brain_glioblastoma_B_R2010105311   
SAGE_Breast_Carcinoma_EPCR+_C6_IDC314208755381   
SAGE_Breast_Normal_Epithelium_CD24+_N4_N481802274101   
SAGE_Embryonic_stem_cell_H1_normal_p31_CL_SHE1727620321   
SAGE_Embryonic_stem_cell_H1_normal_p54_CL_SHE1621821421   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES115173511   
SAGE_Embryonic_stem_cell_HES4_normal_p36_CL_SHE1120923221   
SAGE_Retina_Peripheral_normal_B_210531211   
SAGE_Retina_Peripheral_normal_B_4Peri12669111   
SAGE_Retina_macula_normal_B_HMAC210241711   
SAGE_Retina_normal_B_4cRet10370111   
SAGE_Skin_Cancer_B_hs02833692239281   
SAGE_Skin_Cancer_B_hs02843892507231   
SAGE_Skin_Melanoma_B_hs02765631800521   
SAGE_Skin_Normal_B_hs02715807686421   
SAGE_Skin_Normal_B_hs02724397550351   
SAGE_Testis_Embryonal_Carcinoma_CL_hs02126370161491   
SAGE_Testis_Embryonal_Carcinoma_CL_hs02135935490501   
SAGE_Thyroid_normal_B_00111593811   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P110287311   
SAGE_Bladder_Cancer_B_hs0241333580180   
SAGE_Breast_Carcinoma_CD24+_C3_IDC384117410140   
SAGE_Breast_Carcinoma_CD24+_C4_IDC40357091040   
SAGE_Breast_Carcinoma_SSEA4+_C7_IDC40338124050   
SAGE_Embryonic_stem_cell_H14_normal_p22_CL_SHE1421217010   
SAGE_Lymph_node_Lymphoma_B_hs0204517899380   
SAGE_Skin_Cancer_B_hs02795703298180   
SAGE_Skin_Cancer_B_hs02803618498130