Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
SAGE Genie
  • Human SAGE Genie Tools
  • Downloads
  • Digital Karyotyping
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Digital Northern Results

Search query: GGGCTCACCT

Color Code                              
Tags per 200,000 <2 <4 <8 <16 <32 <64 <128 <256 <512 >512

LibraryTotal Tags
in Library
Tag CountsTags per
200,000
Color
Code
SAGE_Liver_cholangiocarcinoma_CL_K4529731556   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Normal_Oxygen792842255   
SAGE_Liver_cholangiocarcinoma_CL_K3548421554   
SAGE_Universal_reference_human_RNA_CL517291246   
SAGE_Prostate_adenocarcinoma_CL_LNCaP22344544   
SAGE_Colon_carcinoma_CL_Hct116_wildtype_p53_Normal_Oxygen803981742   
SAGE_Retina_Retinoblastoma_B_1884901942   
SAGE_Breast_carcinoma_metastasis_B_2497941040   
SAGE_Bone_marrow_normal_AP_CD34+/CD38-/lin-863911739   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Anoxia790531537   
SAGE_Colon_adenocarcinoma_CL_RKO51294935   
SAGE_Colon_adenocarcinoma_CL_SW83761148826   
SAGE_Breast_carcinoma_CL_ZR75_1_estrogen38797525   
SAGE_Kidney_embryonic_CL_293+beta-catenin23519325   
SAGE_Ovary_cystadenoma_CL_ML10-1055144725   
SAGE_Brain_medulloblastoma_CL_4-HCR66599824   
SAGE_Breast_carcinoma_CL_MCF7estradiol_10H60725723   
SAGE_Colon_adenocarcinoma_CL_Caco260682723   
SAGE_Kidney_carcinoma_B_D21002811223   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES11517351519   
SAGE_Kidney_embryonic_CL_293-control41955419   
SAGE_Brain_medulloblastoma_B_98-04-P49443068418   
SAGE_Brain_medulloblastoma_B_H97285376818   
SAGE_Eye_lens_B_UIHI085898818   
SAGE_Pancreas_normal_CS_H12632223318   
SAGE_Bone_marrow_normal_AP_CD34+/CD38+/lin+81595717   
SAGE_Brain_glioblastoma_CL_H39255990517   
SAGE_Breast_carcinoma_CL_MDA435H2446631417   
SAGE_Breast_metastatic_carcinoma_B_LN145087417   
SAGE_Prostate_carcinoma_B_LN-122599217   
SAGE_Brain_medulloblastoma_B_127338614315   
SAGE_Colon_carcinoma_CL_Hct116_wildtype_p53_Anoxia79015615   
SAGE_Embryonic_stem_cell_BG01_normal_p20_CL_SHE192016681615   
SAGE_Embryonic_stem_cell_H14_normal_p22_CL_SHE142121701615   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES24014323115   
SAGE_Brain_medulloblastoma_B_DL583671614   
SAGE_Brain_medulloblastoma_B_H87667404514   
SAGE_Embryonic_stem_cell_HES3_normal_p16_CL_SHE102053531514   
SAGE_Brain_astrocytoma_grade_III_B_R927107344713   
SAGE_Brain_medulloblastoma_B_H30660454413   
SAGE_Brain_medulloblastoma_CL_H34143920313   
SAGE_Embryonic_stem_cell_H1_normal_p54_CL_SHE162182141513   
SAGE_Lymph_Node_Lymphoma_B_172008513   
SAGE_Placenta_hydatidiform_mole_B_1101677713   
SAGE_Brain_Medulloblastoma_CL_425C262642412   
SAGE_Breast_carcinoma_CL_ZR75_1_untreated32303212   
SAGE_Cartilage_chondrosarcoma_grade_1_CL_UIIC033081212   
SAGE_Ovary_normal_CL_IOSE29EC-1147159312   
SAGE_Testis_Embryonal_Carcinoma_CL_hs0213593549035311   
SAGE_Breast_carcinoma_B_95-25939364210   
SAGE_Colon_adenocarcinoma_B_Tu10255700310   
SAGE_Embryonic_stem_cell_H1_normal_p31_CL_SHE172762031410   
SAGE_Ovary_endometriosis_CL_E1276097410   
SAGE_Pancreas_adenocarcinoma_CL_CAPAN137674210   
SAGE_Prostate_carcinoma_CL_PC3_Mock38819210   
SAGE_Brain_glioblastoma_CL_28d11062459   
SAGE_Breast_carcinoma_B_CT15_IDC2184019   
SAGE_Breast_carcinoma_B_IDC-46409539   
SAGE_Breast_carcinoma_CL_MCF7estradiol_3h6016239   
SAGE_Breast_carcinoma_CL_ZR75_1_tamoxifen4005229   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC86652039   
SAGE_Breast_normal_epithelium_CD24+_AP_N24155129   
SAGE_Fibroblasts_CL_postcrisis2183319   
SAGE_Ovary_carcinoma_CL_A27802136919   
SAGE_Prostate_carcinoma_CL_LNCaP-T4354229   
SAGE_Skin_melanoma_B_DB24133829   
SAGE_Testis_Embyronal_Carcinoma_B_16635239   
SAGE_Uterus_endometrium_normal_CS_DI12199119   
SAGE_Brain_glioblastoma_B_H11106898638   
SAGE_Brain_glioblastoma_B_H1425C8899048   
SAGE_Brain_medulloblastoma_B_97-05-P0156997138   
SAGE_Brain_medulloblastoma_CL_mhh-14785828   
SAGE_Kidney_Glomeruli_Normal_B_bjballer14890528   
SAGE_Liver_cholangiocarcinoma_B_K2D4685328   
SAGE_Pancreas_adenocarcinoma_CL_Panc12474918   
SAGE_Stomach_adenocarcinoma_MD_G3294680228   
SAGE_Brain_medulloblastoma_B_96-04-P0195264527   
SAGE_Brain_oligodendroglioma_B_H9882786417   
SAGE_Breast_carcinoma_B_BWHT18_DCIS5070127   
SAGE_Breast_fibroadenoma_MD5568827   
SAGE_Colon_adenocarcinoma_CL_HCT1165564127   
SAGE_Embryonic_stem_cell_H7_normal_p33_CL_SHE13272465107   
SAGE_Embryonic_stem_cell_HSF6_normal_p50_CL_SHES922448887   
SAGE_Ovary_adenocarcinoma_B_OVT-75351427   
SAGE_Skin_Melanoma_B_hs027656318002027   
SAGE_Stomach_carcinoma_B_xenograph_X435162027   
SAGE_Stomach_normal_B_antrum2665317   
SAGE_Vascular_endothelium_normal_breast_associated_P1H12+_AP_15702327   
SAGE_Brain_glioblastoma_control_CL_H2476042826   
SAGE_Brain_medulloblastoma_B_98-04-P1173257016   
SAGE_Brain_medulloblastoma_B_H14136185326   
SAGE_Brain_medulloblastoma_B_H4845746926   
SAGE_Brain_medulloblastoma_CL_D2836631626   
SAGE_Breast_carcinoma_CL_MCF7control_0h5987726   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC96593526   
SAGE_Breast_phyllodes_tumor_fibroblasts_AP_0702025957526   
SAGE_Ovary_carcinoma_CL_ES2-13115916   
SAGE_Pancreas_adenocarcinoma_B_96-62523321316   
SAGE_Pancreas_carcinoma_CL_PL452955716   
SAGE_Pancreas_normal_CS_HX3198516   
SAGE_Placenta_first_trimester_normal_B_18926536   
SAGE_Prostate_carcinoma_CL_A+3029816   
SAGE_Vascular_normal_CS_VEGF+5731626   
SAGE_White_Blood_Cells_normal_breast_associated_CD45+_AP3198516   
SAGE_Brain_ependymoma_B_R3537382225   
SAGE_Brain_glioblastoma_B_H83310060035   
SAGE_Brain_glioblastoma_CL_4d11521235   
SAGE_Brain_medulloblastoma_B_H2757231825   
SAGE_Breast_carcinoma_B_95-3476707025   
SAGE_Breast_normal_FS_NER3456515   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIEK03774715   
SAGE_Eye_Retinoblastoma_B_hs0389124342323365   
SAGE_Lung_adenocarcinoma_B_13625615   
SAGE_Lung_adenocarcinoma_MD_L93591615   
SAGE_Placenta_normal_B_111808335   
SAGE_Stomach_normal_MD_14S7335325   
SAGE_Testis_Embryonal_Carcinoma_CL_hs021263701611875   
SAGE_Brain_astrocytoma_grade_III_B_H2729605924   
SAGE_Brain_medulloblastoma_B_98-05-P0408925824   
SAGE_Brain_medulloblastoma_B_98-05-P6084845114   
SAGE_Brain_meningioma_grade_II_B_SF21764871114   
SAGE_Brain_meningioma_grade_II_B_SF36224485714   
SAGE_Breast_carcinoma_B_DCIS-54309814   
SAGE_Breast_normal_epithelium_CD24+_AP_N154143014   
SAGE_Colon_adenocarcinoma_B_Tu984137114   
SAGE_Colon_normal_B_NC24847914   
SAGE_Embryo_Pre-Cancer_B_hs032468930161474   
SAGE_Embryonic_stem_cell_H13_normal_p22_CL_SHE1522110154   
SAGE_GallBladder_Adenocarcinoma_B_C018138024   
SAGE_Prostate_carcinoma_CL_LNCaP-C4002914   
SAGE_Stomach_adenocarcinoma_MD_HG79371424   
SAGE_Stomach_normal_MD_13S4590814   
SAGE_Bone_Marrow_AML_FS_CD34+CD38+6151913   
SAGE_Brain_astrocyte_normal_CL_NHA55148113   
SAGE_Brain_astrocytoma_grade_III_B_40710831223   
SAGE_Brain_astrocytoma_grade_III_B_58410300823   
SAGE_Brain_astrocytoma_grade_III_B_H10205157313   
SAGE_Brain_astrocytoma_grade_II_B_H35910576423   
SAGE_Brain_ependymoma_B_R4555182513   
SAGE_Brain_glioblastoma_B_R2010105323   
SAGE_Brain_glioblastoma_CL_H54+EGFRvIII5698213   
SAGE_Brain_normal_cortex_B_pool66245113   
SAGE_Breast_carcinoma_B_IDC-56045113   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC76509113   
SAGE_Breast_carcinoma_epithelium_CD44+_AP_PE25234213   
SAGE_Breast_metastatic_carcinoma_B_LN26034313   
SAGE_Breast_normal_organoid_B5818113   
SAGE_Peripheral_Blood_Cancer_B_hs042957568481123   
SAGE_Prostate_carcinoma_B_pool26603413   
SAGE_Retina_Pigment_epithelium_normal_B_15366613   
SAGE_Stomach_adenocarcinoma_B_G2346492513   
SAGE_Stomach_adenocarcinoma_MD_HS295883113   
SAGE_White_Blood_Cells_monocytes_normal_AP_P25442613   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P25029713   
SAGE_Bladder_Cancer_B_hs02645833968592   
SAGE_Brain_Medulloblastoma_CL_425Otx2siRNA9729112   
SAGE_Brain_Medulloblastoma_CL_UW228-N9493712   
SAGE_Brain_Medulloblastoma_CL_UW228-V28082712   
SAGE_Brain_glioblastoma_B_R709909912   
SAGE_Brain_glioblastoma_CL_H54+LacZ6690812   
SAGE_Brain_normal_cortex_B_BB5429423312   
SAGE_Breast_carcinoma_B_IDC-36889112   
SAGE_Breast_carcinoma_associated_myoepithelium_CD10+_AP_DCIS68145212   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS67285712   
SAGE_Breast_carcinoma_myoepithelium_X_ITGB6+_AP7878512   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N57617312   
SAGE_Esophagus_Adenocarcinoma_B_CA1D7379312   
SAGE_Esophagus_Dysplasia_B_HGD027861112   
SAGE_Esophagus_Dysplasia_B_LGD017490412   
SAGE_GallBladder_Adenocarcinoma_B_NAM017854812   
SAGE_Lung_adenocarcinoma_MD_L108688712   
SAGE_Lung_normal_B_18870812   
SAGE_Lung_tumor_associated_chronic_inflammation_B_UIHM09896212   
SAGE_Lymph_Node_normal_B_19942612   
SAGE_Skin_Normal_B_hs02816517089932   
SAGE_Vascular_endothelium_hemangioma_B_1467568012   
SAGE_Bladder_Cancer_B_hs02654640198391   
SAGE_Brain_astrocytoma_grade_III_B_34310015811   
SAGE_Brain_astrocytoma_grade_III_B_H97010698211   
SAGE_Brain_astrocytoma_grade_II_B_H51811602211   
SAGE_Brain_ependymoma_B_R62812043111   
SAGE_Brain_glioblastoma_B_H135312480511   
SAGE_Brain_glioblastoma_B_R33610232211   
SAGE_Brain_glioblastoma_CL_stem_cells10841411   
SAGE_Embryonic_stem_cell_HES4_normal_p36_CL_SHE1120923221   
SAGE_Embryonic_stem_cell_normal_CL_hs02383636083351   
SAGE_Lymph_node_Lymphoma_B_hs01964791481301   
SAGE_Lymph_node_Lymphoma_B_hs02045178993291   
SAGE_Peripheral_Blood_Cancer_B_hs04306399705581   
SAGE_Retina_Macula_normal_B_4Mac10141711   
SAGE_Skin_Cancer_B_hs02795703298571   
SAGE_Skin_Melanoma_B_hs02733881770251   
SAGE_Skin_Melanoma_B_hs02743895211351   
SAGE_Skin_Normal_B_hs02824411636251   
SAGE_Thyroid_follicular_carcinoma_B_TT00412466411   
SAGE_Vein_normal_B_hs02306755622411   
SAGE_Vein_normal_B_hs02376135688501   
SAGE_Bladder_Cancer_B_hs0240621642640   
SAGE_Bladder_Cancer_B_hs02413335801110   
SAGE_Bladder_Cancer_B_hs0266424461220   
SAGE_Bone_Marrow_Normal_FS_hs0404484254720   
SAGE_Brain_fetal_normal_B_S130554610   
SAGE_Breast_Carcinoma_CD24+_C1_IDC31428660490   
SAGE_Breast_Carcinoma_CD24+_C2_IDC344720960170   
SAGE_Breast_Carcinoma_CD24+_C3_IDC384117410160   
SAGE_Breast_Carcinoma_CD24+_C4_IDC40357091080   
SAGE_Breast_Carcinoma_EPCR+_C5_IDC27379656880   
SAGE_Breast_Carcinoma_EPCR+_C6_IDC314208755100   
SAGE_Breast_Carcinoma_SSEA4+_C7_IDC40338124050   
SAGE_Breast_Normal_Epithelium_CD24+_N1_N339646880160   
SAGE_Breast_Normal_Epithelium_CD24+_N2_N3513584223130   
SAGE_Breast_Normal_Epithelium_CD24+_N3_N47303600250   
SAGE_Breast_Normal_Epithelium_CD24+_N4_N48180227440   
SAGE_Breast_Normal_Epithelium_CD44+_N6_N48104876510   
SAGE_Breast_Normal_Epithelium_CD44+_N7_N5811007864230   
SAGE_Foreskin_normal_B_hs03053940350140   
SAGE_Skin_Cancer_B_hs0280361849840   
SAGE_Skin_Cancer_B_hs0283369223930   
SAGE_Skin_Cancer_B_hs0284389250790   
SAGE_Skin_Melanoma_B_hs02754128221130   
SAGE_Skin_Normal_B_hs0271580768630   
SAGE_Skin_Normal_B_hs0272439755050   
SAGE_Skin_Normal_B_hs02775269789150   
SAGE_Skin_Normal_B_hs0278304222160   
SAGE_Urothelium_normal_B_hs0239311430750   
SAGE_Uterus_Normal_B_hs0194645262370   
SAGE_Uterus_normal_B_hs01953718463100