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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Digital Northern Results

Search query: GGATTTTGGT

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Tags per 200,000 <2 <4 <8 <16 <32 <64 <128 <256 <512 >512

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SAGE_Skin_Melanoma_B_hs0274389521153727   
SAGE_Ovary_endometriosis_CL_E12760971026   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Anoxia79053922   
SAGE_Brain_glioblastoma_CL_28d1106241221   
SAGE_Uterus_endometrium_normal_CS_DI121991218   
SAGE_Brain_Medulloblastoma_CL_UW228-V280827717   
SAGE_Brain_glioblastoma_CL_4d1152121017   
SAGE_Colon_carcinoma_CL_Hct116_wildtype_p53_Anoxia79015717   
SAGE_Brain_normal_substantia_nigra_B_141773314   
SAGE_Breast_carcinoma_CL_MDA435H4840323314   
SAGE_Breast_carcinoma_epithelium_PROCR+_AP_IDC2954080414   
SAGE_Colon_carcinoma_CL_Hct116_wildtype_p53_Normal_Oxygen80398614   
SAGE_Rheumatoid_arthritis_synovial_fibroblast_CS42472314   
SAGE_Skin_Melanoma_B_hs0273388177026913   
SAGE_Breast_carcinoma_CL_ZR75_1_estrogen38797210   
SAGE_Prostate_carcinoma_CL_PC3_Mock38819210   
SAGE_Skin_normal_B_NS36615210   
SAGE_Brain_astrocytoma_grade_II_B_H35910576459   
SAGE_Lung_normal_CL_L154222629   
SAGE_Pancreas_normal_B_12152019   
SAGE_Prostate_carcinoma_B_pool26603439   
SAGE_White_Blood_Cells_monocyte_normal_AP_P110115859   
SAGE_Brain_Medulloblastoma_CL_425Otx2siRNA9729148   
SAGE_Brain_Medulloblastoma_CL_UW228-N9493748   
SAGE_Brain_astrocytoma_grade_III_B_R14011873358   
SAGE_Brain_glioblastoma_CS_TA24667828   
SAGE_Brain_normal_thalamus_B_12401518   
SAGE_Breast_Carcinoma_CD24+_C4_IDC4035709101608   
SAGE_Breast_carcinoma_MD_LCIS6783438   
SAGE_Breast_carcinoma_associated_stroma_B_IDC76802438   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS67285738   
SAGE_Pancreas_adenocarcinoma_CL_Panc12474918   
SAGE_Prostate_normal_epithelium_CS_confluent7189738   
SAGE_Brain_astrocytoma_grade_I_B_H10437592237   
SAGE_Brain_ependymoma_B_13945631427   
SAGE_Brain_fetal_normal_B_S1305546127   
SAGE_Brain_glioblastoma_CL_stem_cells10841447   
SAGE_Breast_carcinoma_B_BWHT18_DCIS5070127   
SAGE_Breast_carcinoma_associated_stroma_B_DCIS65704927   
SAGE_Breast_carcinoma_epithelium_PROCR+_AP_IDC285278127   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGP010831947   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Normal_Oxygen7928437   
SAGE_Peripheral_Blood_Cancer_B_hs042957568482057   
SAGE_Skin_Melanoma_B_hs027541282211537   
SAGE_Skin_melanoma_B_DB12603217   
SAGE_Vascular_endothelium_normal_liver_associated_AP_NLEC17775937   
SAGE_White_Blood_Cells_monocyte_depleted_mononuclear_cells_normal_AP_A15379527   
SAGE_Bladder_Cancer_B_hs024133358011066   
SAGE_Brain_Medulloblastoma_CL_425C26264226   
SAGE_Brain_ependymoma_B_11506237326   
SAGE_Brain_glioblastoma_B_R709909936   
SAGE_Brain_medulloblastoma_B_H4845746926   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N156399426   
SAGE_Cartilage_chondrosarcoma_grade_1_CL_UIIC03308116   
SAGE_Ovary_carcinoma_CL_ES2-13115916   
SAGE_Peripheral_Blood_Cancer_B_hs043063997051976   
SAGE_Prostate_adenocarcinoma_MD_PR3176495126   
SAGE_Skin_Normal_B_hs02783042221946   
SAGE_Stomach_adenocarcinoma_MD_HG79371436   
SAGE_Vein_normal_B_hs023761356881856   
SAGE_Brain_medulloblastoma_B_12733861415   
SAGE_Brain_medulloblastoma_B_DL76839225   
SAGE_Brain_normal_peds_cortex_B_H15717755425   
SAGE_Breast_carcinoma_B_95-2593936415   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_IDC263936115   
SAGE_Breast_normal_epithelium_MUC1+_AP_N157170425   
SAGE_Breast_normal_epithelium_MUC1+_AP_N57622725   
SAGE_Embryonic_stem_cell_BG01_normal_p20_CL_SHE1920166865   
SAGE_Embryonic_stem_cell_H13_normal_p22_CL_SHE1522110165   
SAGE_Esophagus_Dysplasia_B_HGD027861125   
SAGE_Esophagus_Dysplasia_B_LGD017490425   
SAGE_Lung_adenocarcinoma_B_13625615   
SAGE_Lymph_Node_Lymphoma_B_17200825   
SAGE_Pancreas_adenocarcinoma_CL_CAPAN13767415   
SAGE_Prostate_normal_epithelium_CS_senescent7171725   
SAGE_Skin_Normal_B_hs028165170891775   
SAGE_Vein_normal_B_hs023067556221815   
SAGE_Bladder_Cancer_B_hs026546401981104   
SAGE_Brain_ependymoma_B_2394665314   
SAGE_Brain_glioblastoma_B_H135312480534   
SAGE_Brain_glioblastoma_B_H1425C8899024   
SAGE_Brain_medulloblastoma_B_98-09-P5588598424   
SAGE_Brain_medulloblastoma_B_98-13-P3014534214   
SAGE_Brain_medulloblastoma_CL_H3414392014   
SAGE_Brain_meningioma_grade_II_B_SF21764871114   
SAGE_Breast_Normal_Epithelium_CD44+_N5_N471890938464   
SAGE_Breast_carcinoma_B_DCIS-54309814   
SAGE_Breast_carcinoma_CL_MDA435H244663114   
SAGE_Breast_metastatic_carcinoma_B_LN14508714   
SAGE_Breast_normal_epithelium_CD24+_AP_N24155114   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIFK08594424   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGX08843924   
SAGE_Embryonic_stem_cell_H7_normal_p33_CL_SHE1327246564   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES240143294   
SAGE_Embryonic_stem_cell_normal_CL_hs02383636083824   
SAGE_Eye_Retinoblastoma_B_hs0389124342322654   
SAGE_GallBladder_Adenocarcinoma_B_C018138024   
SAGE_GallBladder_Normal_B_HN8570624   
SAGE_Kidney_Glomeruli_Normal_B_bjballer14890514   
SAGE_Kidney_embryonic_CL_293-control4195514   
SAGE_Ovary_normal_CL_IOSE29EC-114715914   
SAGE_Ovary_normal_CS_HOSE_44772814   
SAGE_Retina_Retinoblastoma_B_18849024   
SAGE_Skin_Cancer_B_hs02803618498734   
SAGE_Skin_Cancer_B_hs02843892507804   
SAGE_Skin_Melanoma_B_hs027656318001354   
SAGE_Skin_Normal_B_hs02824411636924   
SAGE_Urothelium_normal_B_hs02393114307714   
SAGE_White_Blood_Cells_monocytes_normal_AP_A29878624   
SAGE_Bladder_Cancer_B_hs02645833968943   
SAGE_Bladder_Cancer_B_hs02664244612753   
SAGE_Brain_astrocyte_normal_CL_NHA55148113   
SAGE_Brain_astrocytoma_grade_III_B_34310015823   
SAGE_Brain_astrocytoma_grade_III_B_43910782423   
SAGE_Brain_astrocytoma_grade_III_B_58410300823   
SAGE_Brain_astrocytoma_grade_II_B_H51811602223   
SAGE_Brain_ependymoma_B_R4555182513   
SAGE_Brain_ependymoma_B_R62812043123   
SAGE_Brain_glioblastoma_B_GBM10625976213   
SAGE_Brain_glioblastoma_B_pooled5642813   
SAGE_Brain_glioblastoma_control_CL_H2476042813   
SAGE_Brain_medulloblastoma_B_H3066045413   
SAGE_Brain_medulloblastoma_CL_D2836631613   
SAGE_Breast_Carcinoma_CD24+_C3_IDC384117410673   
SAGE_Breast_Carcinoma_SSEA4+_C7_IDC403381240653   
SAGE_Breast_Normal_Epithelium_CD44+_N7_N58110078641743   
SAGE_Breast_carcinoma_B_DCIS-46060513   
SAGE_Breast_carcinoma_associated_myoepithelium_CD10+_AP_DCIS75199313   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_PE25013213   
SAGE_Breast_metastatic_carcinoma_B_LN26034313   
SAGE_Breast_normal_myoepithelium_CL_HME505551613   
SAGE_Breast_normal_organoid_B5818113   
SAGE_Breast_normal_stroma_B_IDC85048513   
SAGE_Colon_adenocarcinoma_CL_RKO5129413   
SAGE_Colon_adenocarcinoma_CL_SW8376114813   
SAGE_Embryonic_stem_cell_HES3_normal_p16_CL_SHE1020535343   
SAGE_Liver_normal_B_16630813   
SAGE_Muscle_normal_B_old5388913   
SAGE_Ovary_cystadenoma_CL_ML10-105514413   
SAGE_Peritoneum_normal_B_135352713   
SAGE_Skin_Cancer_B_hs027957032981093   
SAGE_Skin_Normal_B_hs02775269789953   
SAGE_Stomach_adenocarcinoma_MD_HS295883113   
SAGE_Testis_Embryonal_Carcinoma_CL_hs021263701611143   
SAGE_Testis_Embryonal_Carcinoma_CL_hs021359354901093   
SAGE_Testis_Embyronal_Carcinoma_B_16635213   
SAGE_Vascular_endothelium_breast_carcinoma_associated_P1H12+_AP_DCIS66531413   
SAGE_White_Blood_Cells_lung_macrophage_normal_AP_L15187213   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P25029713   
SAGE_Bladder_Cancer_B_hs02406216426772   
SAGE_Brain_astrocytoma_grade_III_B_8289993912   
SAGE_Brain_ependymoma_B_H5806861412   
SAGE_Brain_ependymoma_B_R3537382212   
SAGE_Brain_ependymoma_B_R5108407312   
SAGE_Brain_ependymoma_B_R5127537912   
SAGE_Brain_glioblastoma_B_H11106898612   
SAGE_Brain_glioblastoma_CL_H54+LacZ6690812   
SAGE_Brain_medulloblastoma_B_97-05-P3127429512   
SAGE_Brain_medulloblastoma_B_98-05-P0408925812   
SAGE_Brain_medulloblastoma_B_C6097461212   
SAGE_Brain_medulloblastoma_B_DL58367112   
SAGE_Brain_medulloblastoma_B_H9728537612   
SAGE_Breast_Normal_Epithelium_CD24+_N2_N35135842231362   
SAGE_Breast_Normal_Epithelium_CD24+_N3_N473036002362   
SAGE_Breast_carcinoma_B_95-3476707012   
SAGE_Breast_carcinoma_B_IDC-36889112   
SAGE_Breast_carcinoma_associated_myoepithelium_CD10+_AP_DCIS68145212   
SAGE_Breast_carcinoma_epithelium_BerEP4+AP_IDC77341012   
SAGE_Breast_carcinoma_myoepithelium_X_ITGB6+_AP7878512   
SAGE_Cartilage_chondrosarcoma_grade_2_B_UIGA09384612   
SAGE_Embryo_Pre-Cancer_B_hs03246893016932   
SAGE_Embryonic_stem_cell_H14_normal_p22_CL_SHE1421217032   
SAGE_Embryonic_stem_cell_H1_normal_p31_CL_SHE1727620332   
SAGE_Embryonic_stem_cell_H1_normal_p54_CL_SHE1621821432   
SAGE_Embryonic_stem_cell_HES4_normal_p36_CL_SHE1120923232   
SAGE_Embryonic_stem_cell_HSF6_normal_p50_CL_SHES922448832   
SAGE_Esophagus_Adenocarcinoma_B_CA1D7379312   
SAGE_Eye_lens_B_UIHI08589812   
SAGE_Foreskin_normal_B_hs03053940350492   
SAGE_GallBladder_Adenocarcinoma_B_HAIIb6698812   
SAGE_Lung_normal_B_18870812   
SAGE_Lung_tumor_associated_chronic_inflammation_B_UIHM09896212   
SAGE_Lymph_Node_normal_B_19942612   
SAGE_Retinal_Pigment_Epithelium_normal_B_4MacRPE7726212   
SAGE_Skin_Cancer_B_hs02833692239432   
SAGE_Skin_Normal_B_hs02715807686692   
SAGE_Skin_Normal_B_hs02724397550532   
SAGE_Stomach_carcinoma_B_xenograft_X1016974912   
SAGE_Stomach_normal_MD_14S7335312   
SAGE_White_Blood_Cells_monocyte_normal_AP_A19991312   
SAGE_Brain_astrocytoma_grade_III_B_40710831211   
SAGE_Brain_astrocytoma_grade_III_B_H105510988611   
SAGE_Brain_astrocytoma_grade_III_B_H97010698211   
SAGE_Brain_astrocytoma_grade_III_B_R92710734411   
SAGE_Brain_astrocytoma_grade_II_B_H12711448911   
SAGE_Brain_astrocytoma_grade_II_B_H38810628511   
SAGE_Brain_astrocytoma_grade_II_B_H51610811611   
SAGE_Brain_astrocytoma_grade_II_B_H53010243911   
SAGE_Brain_glioblastoma_B_H83310060011   
SAGE_Breast_Carcinoma_CD24+_C2_IDC344720960251   
SAGE_Breast_Carcinoma_EPCR+_C5_IDC273796568371   
SAGE_Breast_Normal_Epithelium_CD24+_N1_N339646880671   
SAGE_Breast_Normal_Epithelium_CD24+_N4_N481802274181   
SAGE_Breast_Normal_Epithelium_CD44+_N6_N48104876571   
SAGE_Lymph_node_Lymphoma_B_hs02045178993341   
SAGE_Placenta_normal_B_111808311   
SAGE_Retina_Peripheral_normal_B_210531211   
SAGE_Retina_Peripheral_normal_B_4Peri12669111   
SAGE_Retina_normal_B_4cRet10370111   
SAGE_Uterus_Normal_B_hs01946452623561   
SAGE_Uterus_normal_B_hs01953718463261   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P110287311   
SAGE_Breast_Carcinoma_CD24+_C1_IDC314286604130   
SAGE_Breast_Carcinoma_EPCR+_C6_IDC314208755200   
SAGE_Lymph_node_Lymphoma_B_hs01964791481170