Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
SAGE Genie
  • Human SAGE Genie Tools
  • Downloads
  • Digital Karyotyping
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Digital Northern Results

Search query: GGATGAGTAC

Color Code                              
Tags per 200,000 <2 <4 <8 <16 <32 <64 <128 <256 <512 >512

LibraryTotal Tags
in Library
Tag CountsTags per
200,000
Color
Code
SAGE_Pancreas_carcinoma_CL_PL4529557320   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIEK037747315   
SAGE_Eye_Retinoblastoma_B_hs03891243423298415   
SAGE_Kidney_embryonic_CL_293-control41955314   
SAGE_Prostate_carcinoma_CL_LNCaP-C40029314   
SAGE_Brain_Medulloblastoma_CL_UW228-N94937612   
SAGE_Breast_carcinoma_CL_MDA435C47270312   
SAGE_Muscle_normal_B_old53889311   
SAGE_Brain_astrocytoma_grade_III_B_H27296059510   
SAGE_Testis_Embryonal_Carcinoma_CL_hs0213593549030710   
SAGE_Brain_Medulloblastoma_CL_UW228-V28082749   
SAGE_Brain_astrocytoma_grade_III_B_R92710734459   
SAGE_Brain_astrocytoma_grade_II_B_H5638856849   
SAGE_Breast_carcinoma_B_IDC-46409539   
SAGE_Breast_carcinoma_CL_MDA435H484032329   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC96593539   
SAGE_Ovary_carcinoma_CL_A27802136919   
SAGE_Prostate_carcinoma_CL_LNCaP-T4354229   
SAGE_Brain_Medulloblastoma_CL_425Otx2siRNA9729148   
SAGE_Brain_ependymoma_B_2394665328   
SAGE_Brain_ependymoma_B_H5806861438   
SAGE_Kidney_embryonic_CL_293+beta-catenin2351918   
SAGE_Ovary_normal_CL_IOSE29EC-114715928   
SAGE_Testis_Embryonal_Carcinoma_CL_hs021263701612728   
SAGE_Breast_Carcinoma_CD24+_C2_IDC3447209601787   
SAGE_Breast_carcinoma_B_BWHT18_DCIS5070127   
SAGE_Embryonic_stem_cell_normal_CL_hs023836360831317   
SAGE_Ovary_adenocarcinoma_B_OVT-75351427   
SAGE_Ovary_cystadenoma_CL_ML10-105514427   
SAGE_Ovary_endometriosis_CL_E127609737   
SAGE_Pelvis_mixoid_chondrosarcoma_grade2_B_UIHT08357737   
SAGE_Skin_Melanoma_B_hs027541282211597   
SAGE_Stomach_normal_B_antrum2665317   
SAGE_Vein_normal_B_hs023067556222517   
SAGE_White_Blood_Cells_monocytes_normal_AP_P25442627   
SAGE_Bladder_Cancer_B_hs026458339681946   
SAGE_Bone_Marrow_AML_FS_CD34+CD38+6151926   
SAGE_Brain_astrocytoma_grade_III_B_8289993936   
SAGE_Brain_medulloblastoma_CL_4-HCR6659926   
SAGE_Brain_medulloblastoma_CL_D2836631626   
SAGE_Brain_oligodendroglioma_B_10013244216   
SAGE_Breast_carcinoma_CL_MCF7estradiol_10H6072526   
SAGE_Breast_phyllodes_tumor_fibroblasts_AP_0702025957526   
SAGE_Colon_adenocarcinoma_CL_SW8376114826   
SAGE_Foreskin_normal_B_hs030539403501306   
SAGE_Lung_adenocarcinoma_MD_L108688736   
SAGE_Lymph_Node_normal_B_19942636   
SAGE_Prostate_carcinoma_CL_LNCaP6025026   
SAGE_Skin_Normal_B_hs028165170892056   
SAGE_Stomach_adenocarcinoma_B_G2346492526   
SAGE_Testis_Embyronal_Carcinoma_B_16635226   
SAGE_Thyroid_follicular_carcinoma_B_TT00412466446   
SAGE_Brain_astrocytoma_grade_III_B_40710831235   
SAGE_Brain_astrocytoma_grade_III_B_58410300835   
SAGE_Brain_astrocytoma_grade_III_B_H97010698235   
SAGE_Brain_ependymoma_B_R5127537925   
SAGE_Brain_fetal_normal_B_S130554685   
SAGE_Brain_glioblastoma_B_H83310060035   
SAGE_Brain_glioblastoma_CL_H54+LacZ6690825   
SAGE_Brain_medulloblastoma_B_12733861415   
SAGE_Breast_carcinoma_epithelium_BerEP4+AP_IDC77341025   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_IDC263936115   
SAGE_Breast_normal_FS_NER3456515   
SAGE_Cartilage_chondrosarcoma_grade_2_CL_UIGE07775725   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Normal_Oxygen7928425   
SAGE_Embryonic_stem_cell_H13_normal_p22_CL_SHE1522110165   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES2401432125   
SAGE_Lung_adenocarcinoma_B_13625615   
SAGE_Lymph_Node_Lymphoma_B_17200825   
SAGE_Lymph_node_Lymphoma_B_hs020451789931515   
SAGE_Pancreas_adenocarcinoma_B_91-161133358215   
SAGE_Pancreas_adenocarcinoma_CL_CAPAN13767415   
SAGE_Prostate_normal_epithelium_CS_confluent7189725   
SAGE_Retina_Peripheral_normal_B_210531235   
SAGE_Skin_Melanoma_B_hs027338817701025   
SAGE_Skin_Melanoma_B_hs02743895211995   
SAGE_Stomach_carcinoma_B_xenograft_X1016974925   
SAGE_Uterus_normal_B_hs019537184631045   
SAGE_Bone_marrow_normal_AP_CD34+/CD38+/lin+8159524   
SAGE_Bone_marrow_normal_AP_CD34+/CD38-/lin-8639124   
SAGE_Brain_glioblastoma_B_H135312480534   
SAGE_Brain_glioblastoma_B_H1425C8899024   
SAGE_Brain_medulloblastoma_B_98-04-P4944306814   
SAGE_Brain_meningioma_grade_II_B_SF21764871114   
SAGE_Brain_normal_substantia_nigra_B_14177314   
SAGE_Breast_Carcinoma_CD24+_C1_IDC3142866041024   
SAGE_Breast_Carcinoma_CD24+_C3_IDC3841174101004   
SAGE_Breast_Carcinoma_CD24+_C4_IDC403570910854   
SAGE_Breast_normal_epithelium_CD24+_AP_N24155114   
SAGE_Embryonic_stem_cell_H7_normal_p33_CL_SHE1327246564   
SAGE_Leukocytes_normal_B_14787314   
SAGE_Liver_cholangiocarcinoma_B_K2D4685314   
SAGE_Lung_normal_CL_L154222614   
SAGE_Ovary_adenocarcinoma_B_OVT-64144314   
SAGE_Peripheral_Blood_Cancer_B_hs043063997051364   
SAGE_Skin_Cancer_B_hs02833692239774   
SAGE_Skin_Normal_B_hs027243975501044   
SAGE_Skin_Normal_B_hs027752697891184   
SAGE_Skin_Normal_B_hs02783042221674   
SAGE_Stomach_adenocarcinoma_MD_G3294680214   
SAGE_Uterus_Normal_B_hs019464526231464   
SAGE_Vein_normal_B_hs023761356881534   
SAGE_White_Blood_Cells_monocyte_normal_AP_A19991324   
SAGE_Bladder_Cancer_B_hs02406216426953   
SAGE_Brain_astrocytoma_grade_III_B_43910782423   
SAGE_Brain_astrocytoma_grade_III_B_H10205157313   
SAGE_Brain_astrocytoma_grade_III_B_R14011873323   
SAGE_Brain_astrocytoma_grade_II_B_H38810628523   
SAGE_Brain_astrocytoma_grade_II_B_H51610811623   
SAGE_Brain_ependymoma_B_11506237313   
SAGE_Brain_ependymoma_B_R102312269023   
SAGE_Brain_ependymoma_B_R4555182513   
SAGE_Brain_ependymoma_B_R5825218913   
SAGE_Brain_ependymoma_B_R62812043123   
SAGE_Brain_glioblastoma_B_pooled5642813   
SAGE_Brain_glioblastoma_CL_H54+EGFRvIII5698213   
SAGE_Brain_glioblastoma_control_CL_H2476042813   
SAGE_Brain_medulloblastoma_B_H13225949813   
SAGE_Brain_medulloblastoma_B_H14136185313   
SAGE_Brain_medulloblastoma_B_H3066045413   
SAGE_Brain_medulloblastoma_B_H4845746913   
SAGE_Brain_meningioma_grade_III_B_SF23665978613   
SAGE_Brain_meningioma_grade_I_B_SF44655464713   
SAGE_Brain_normal_cerebellum_B_15038513   
SAGE_Brain_normal_cortex_B_pool66245113   
SAGE_Breast_Carcinoma_EPCR+_C6_IDC314208755673   
SAGE_Breast_Normal_Epithelium_CD44+_N7_N58110078641803   
SAGE_Breast_carcinoma_B_IDC-56045113   
SAGE_Breast_carcinoma_CL_MCF7estradiol_3h6016213   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC76509113   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC96353913   
SAGE_Breast_normal_B_gestational hyperplasia16170413   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N15722213   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGP010831923   
SAGE_Colon_adenocarcinoma_B_Tu1025570013   
SAGE_Colon_adenocarcinoma_CL_Caco26068213   
SAGE_Embryo_Pre-Cancer_B_hs032468930161143   
SAGE_Embryonic_stem_cell_BG01_normal_p20_CL_SHE1920166843   
SAGE_Embryonic_stem_cell_H1_normal_p54_CL_SHE1621821443   
SAGE_Embryonic_stem_cell_HSF6_normal_p50_CL_SHES922448843   
SAGE_Kidney_carcinoma_B_D210028123   
SAGE_Peripheral_Blood_Cancer_B_hs042957568481083   
SAGE_Peritoneum_normal_B_135352713   
SAGE_Prostate_carcinoma_B_pool26603413   
SAGE_Prostate_carcinoma_CL_LNCaP_no-DHT6216013   
SAGE_Prostate_normal_B_26405813   
SAGE_Prostate_normal_MD_PR3175927713   
SAGE_Retina_Peripheral_normal_B_4Peri12669123   
SAGE_Skin_Normal_B_hs027158076861153   
SAGE_Skin_Normal_B_hs02824411636743   
SAGE_Stomach_carcinoma_B_G1896307513   
SAGE_Urothelium_normal_B_hs02393114307483   
SAGE_Vascular_normal_CS_VEGF+5731613   
SAGE_Vascular_normal_CS_control5164213   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P25029713   
SAGE_Bladder_Cancer_B_hs02654640198602   
SAGE_Bladder_Cancer_B_hs02664244612562   
SAGE_Brain_glioblastoma_B_H11106898612   
SAGE_Brain_glioblastoma_B_R709909912   
SAGE_Brain_glioblastoma_hypoxia_CL_H2477176512   
SAGE_Brain_medulloblastoma_B_97-05-P3127429512   
SAGE_Brain_medulloblastoma_B_DL76839212   
SAGE_Brain_meningioma_grade_I_B_SF42716925312   
SAGE_Brain_normal_cortex_B_BB5429423312   
SAGE_Breast_Carcinoma_EPCR+_C5_IDC273796568442   
SAGE_Breast_carcinoma_B_IDC-36889112   
SAGE_Breast_carcinoma_MD_LCIS6783412   
SAGE_Breast_carcinoma_epithelium_X_MUC1+_AP7514712   
SAGE_Breast_normal_epithelium_MUC1+_AP_N157170412   
SAGE_Breast_normal_myoepithelium_CD10+_AP_IDC76900612   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N57617312   
SAGE_Cartilage_chondrosarcoma_grade_2_B_UIGA09384612   
SAGE_Cartilage_chondrosarcoma_grade_3_CL_UIIA06802112   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIFK08594412   
SAGE_Embryonic_stem_cell_HES3_normal_p16_CL_SHE1020535332   
SAGE_Embryonic_stem_cell_HES4_normal_p36_CL_SHE1120923232   
SAGE_Esophagus_Adenocarcinoma_B_CA1D7379312   
SAGE_Heart_normal_B_18306312   
SAGE_Lymph_node_Lymphoma_B_hs01964791481682   
SAGE_Placenta_first_trimester_normal_B_18926512   
SAGE_Retinal_Pigment_Epithelium_normal_B_4MacRPE7726212   
SAGE_Skin_Cancer_B_hs02795703298622   
SAGE_Skin_Cancer_B_hs02803618498542   
SAGE_Skin_Cancer_B_hs02843892507562   
SAGE_Skin_Melanoma_B_hs02765631800592   
SAGE_Stomach_adenocarcinoma_MD_HG79371412   
SAGE_Vascular_endothelium_hemangioma_B_1467568012   
SAGE_Vascular_endothelium_normal_liver_associated_AP_NLEC17775912   
SAGE_Brain_astrocytoma_grade_III_B_34310015811   
SAGE_Brain_astrocytoma_grade_III_B_H105510988611   
SAGE_Brain_astrocytoma_grade_II_B_H51811602211   
SAGE_Brain_glioblastoma_CL_28d11062411   
SAGE_Brain_glioblastoma_CL_stem_cells10841411   
SAGE_Breast_Carcinoma_SSEA4+_C7_IDC403381240321   
SAGE_Breast_Normal_Epithelium_CD24+_N4_N481802274141   
SAGE_Embryonic_stem_cell_H14_normal_p22_CL_SHE1421217021   
SAGE_Embryonic_stem_cell_H1_normal_p31_CL_SHE1727620321   
SAGE_Retina_Macula_normal_B_4Mac10141711   
SAGE_Thyroid_normal_B_00111593811   
SAGE_White_Blood_Cells_monocyte_normal_AP_P110115811   
SAGE_White_Blood_Cells_monocytes_normal_AP_C110165611   
SAGE_Bladder_Cancer_B_hs02413335801120   
SAGE_Bone_Marrow_Cancer_FS_hs04054900037100   
SAGE_Breast_Normal_Epithelium_CD24+_N1_N33964688080   
SAGE_Breast_Normal_Epithelium_CD24+_N2_N3513584223160   
SAGE_Breast_Normal_Epithelium_CD24+_N3_N473036002100   
SAGE_Breast_Normal_Epithelium_CD44+_N5_N47189093820   
SAGE_Breast_Normal_Epithelium_CD44+_N6_N48104876510