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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


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Code
SAGE_Breast_carcinoma_CL_ZR75_1_untreated32303955   
SAGE_Prostate_carcinoma_CL_LNCaP-T435421045   
SAGE_Prostate_carcinoma_CL_A+30298639   
SAGE_Prostate_carcinoma_CL_LNCaP-C40029839   
SAGE_Prostate_carcinoma_CL_LNCaP_no-DHT62160928   
SAGE_Breast_carcinoma_CL_ZR75_1_tamoxifen40052524   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS7891841124   
SAGE_Prostate_carcinoma_B_pool266034824   
SAGE_Breast_Normal_Epithelium_CD24+_N1_N339646880112823   
SAGE_Breast_Normal_Epithelium_CD24+_N2_N3513584223135519   
SAGE_Breast_normal_epithelium_CD24+_AP_N1541430419   
SAGE_Ovary_carcinoma_CL_ES2-131159319   
SAGE_Pancreas_adenocarcinoma_B_96-625233213318   
SAGE_Prostate_carcinoma_B_LN-122599217   
SAGE_Breast_carcinoma_epithelium_BerEP4+AP_IDC773410616   
SAGE_Colon_adenocarcinoma_CL_Caco260682516   
SAGE_Pancreas_adenocarcinoma_CL_Panc124749216   
SAGE_Breast_carcinoma_CL_ZR75_1_estrogen38797315   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS-266168515   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC965935515   
SAGE_Prostate_normal_B_264058515   
SAGE_Peritoneum_mesothelioma_B_1232529212   
SAGE_Brain_ependymoma_B_R1023122690711   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_PE250132311   
SAGE_Breast_normal_epithelium_MUC1+_AP_N1571704411   
SAGE_Brain_meningioma_grade_III_B_SF236659786310   
SAGE_Breast_Normal_Epithelium_CD24+_N3_N47303600216510   
SAGE_Breast_Normal_Epithelium_CD24+_N4_N4818022749710   
SAGE_Breast_Carcinoma_CD24+_C2_IDC3447209602239   
SAGE_Colon_normal_B_NC24847928   
SAGE_Embryonic_stem_cell_H7_normal_p33_CL_SHE13272465128   
SAGE_Prostate_adenocarcinoma_CL_LNCaP2234418   
SAGE_Stomach_normal_epithelium_B_body12476118   
SAGE_Brain_glioblastoma_CL_H54+EGFRvIII5698227   
SAGE_Brain_oligodendroglioma_B_H9882786417   
SAGE_Breast_carcinoma_epithelium_CD44+_AP_ASC35247827   
SAGE_Embryonic_stem_cell_H14_normal_p22_CL_SHE1421217087   
SAGE_Embryonic_stem_cell_H1_normal_p54_CL_SHE1621821487   
SAGE_Ovary_adenocarcinoma_B_OVT-75351427   
SAGE_Ovary_cystadenoma_CL_ML10-105514427   
SAGE_Universal_reference_human_RNA_CL5172927   
SAGE_Brain_glioblastoma_control_CL_H2476042826   
SAGE_Brain_medulloblastoma_CL_4-HCR6659926   
SAGE_Brain_oligodendroglioma_B_10013244216   
SAGE_Breast_Normal_Epithelium_CD44+_N6_N481048765356   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_IDC285795626   
SAGE_Breast_metastatic_carcinoma_B_LN26034326   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N156399426   
SAGE_Cartilage_chondrosarcoma_grade_1_CL_UIIC03308116   
SAGE_Colon_adenocarcinoma_CL_SW8376114826   
SAGE_Pancreas_normal_CS_H1263222316   
SAGE_Prostate_carcinoma_CL_LNCaP6025026   
SAGE_Thyroid_follicular_carcinoma_B_TT00412466446   
SAGE_White_Blood_Cells_normal_breast_associated_CD45+_AP3198516   
SAGE_Bone_Marrow_Cancer_FS_hs040549000371375   
SAGE_Brain_astrocytoma_grade_III_B_43910782435   
SAGE_Brain_ependymoma_B_R5127537925   
SAGE_Brain_glioblastoma_CL_4d11521235   
SAGE_Brain_glioblastoma_hypoxia_CL_H2477176525   
SAGE_Breast_Normal_Epithelium_CD44+_N5_N471890938505   
SAGE_Breast_normal_epithelium_CD24+_AP_N57646925   
SAGE_Embryonic_stem_cell_H1_normal_p31_CL_SHE1727620385   
SAGE_Embryonic_stem_cell_HES3_normal_p16_CL_SHE1020535365   
SAGE_Lung_adenocarcinoma_B_13625615   
SAGE_Brain_astrocytoma_grade_III_B_8289993924   
SAGE_Breast_carcinoma_B_DCIS-54309814   
SAGE_Breast_carcinoma_CL_MDA435H244663114   
SAGE_Breast_normal_epithelium_BEREP4+_AP_N14872914   
SAGE_Colon_adenocarcinoma_B_Tu984137114   
SAGE_Colon_normal_B_NC14961014   
SAGE_Kidney_embryonic_CL_293-control4195514   
SAGE_Liver_cholangiocarcinoma_B_K2D4685314   
SAGE_Ovary_normal_CL_IOSE29EC-114715914   
SAGE_Skin_Melanoma_B_hs02754128221834   
SAGE_Bladder_Cancer_B_hs02664244612793   
SAGE_Brain_Medulloblastoma_CL_425C26264213   
SAGE_Brain_astrocyte_normal_CL_NHA55148113   
SAGE_Brain_astrocytoma_grade_II_B_H50112830923   
SAGE_Brain_ependymoma_B_R4555182513   
SAGE_Brain_ependymoma_B_R62812043123   
SAGE_Brain_glioblastoma_B_pooled5642813   
SAGE_Brain_glioblastoma_CL_stem_cells10841423   
SAGE_Brain_normal_cortex_B_pool66245113   
SAGE_Breast_carcinoma_B_IDC-46409513   
SAGE_Breast_carcinoma_B_IDC-56045113   
SAGE_Breast_carcinoma_CL_MCF7estradiol_3h6016213   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS-35740213   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC86652013   
SAGE_Breast_carcinoma_epithelium_PROCR+_AP_IDC285278113   
SAGE_Breast_carcinoma_epithelium_PROCR+_AP_IDC295408013   
SAGE_Breast_normal_B_gestational hyperplasia16170413   
SAGE_Breast_normal_epithelium_BEREP4+_AP_N25051213   
SAGE_Breast_normal_epithelium_CD44+_AP_N25600813   
SAGE_Colon_adenocarcinoma_B_Tu1025570013   
SAGE_Colon_adenocarcinoma_CL_HCT1165564113   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES240143283   
SAGE_Embryonic_stem_cell_HSF6_normal_p50_CL_SHES922448843   
SAGE_Prostate_adenocarcinoma_MD_PR3176495113   
SAGE_Prostate_normal_MD_PR3175927713   
SAGE_Retina_Macula_normal_B_4Mac10141723   
SAGE_Retina_normal_B_4cRet10370123   
SAGE_Skin_Normal_B_hs02724397550733   
SAGE_Stomach_adenocarcinoma_B_G2346492513   
SAGE_Stomach_carcinoma_B_xenograph_X435162013   
SAGE_Testis_Embryonal_Carcinoma_CL_hs021263701611123   
SAGE_Testis_Embryonal_Carcinoma_CL_hs02135935490973   
SAGE_Testis_Embyronal_Carcinoma_B_16635213   
SAGE_Urothelium_normal_B_hs02393114307593   
SAGE_Uterus_normal_B_hs01953718463713   
SAGE_Vascular_endothelium_normal_breast_associated_P1H12+_AP_15702313   
SAGE_Vascular_normal_CS_VEGF+5731613   
SAGE_White_Blood_Cells_monocyte_normal_AP_P110115823   
SAGE_Bladder_Cancer_B_hs02406216426832   
SAGE_Bone_marrow_normal_AP_CD34+/CD38-/lin-8639112   
SAGE_Brain_ependymoma_B_R3537382212   
SAGE_Brain_ependymoma_B_R5108407312   
SAGE_Brain_fetal_normal_B_S130554642   
SAGE_Brain_glioblastoma_B_R709909912   
SAGE_Brain_glioblastoma_CL_H54+LacZ6690812   
SAGE_Brain_meningioma_grade_I_B_SF42716925312   
SAGE_Breast_Normal_Epithelium_CD44+_N7_N58110078641472   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC87396712   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS67285712   
SAGE_Breast_carcinoma_epithelium_X_MUC1+_AP7514712   
SAGE_Breast_carcinoma_myoepithelium_X_ITGB6+_AP7878512   
SAGE_Breast_normal_epithelium_MUC1+_AP_N57622712   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N57617312   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIFK08594412   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGX08843912   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Normal_Oxygen7928412   
SAGE_Colon_carcinoma_CL_Hct116_wildtype_p53_Normal_Oxygen8039812   
SAGE_Embryonic_stem_cell_H13_normal_p22_CL_SHE1522110132   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES115173522   
SAGE_Embryonic_stem_cell_HES4_normal_p36_CL_SHE1120923232   
SAGE_Esophagus_Adenocarcinoma_B_CA1D7379312   
SAGE_Esophagus_Dysplasia_B_HGD027861112   
SAGE_GallBladder_Adenocarcinoma_B_NAM017854812   
SAGE_Lung_adenocarcinoma_MD_L108688712   
SAGE_Lung_tumor_associated_chronic_inflammation_B_UIHM09896212   
SAGE_Retinal_Pigment_Epithelium_normal_B_4PeriRPE9019912   
SAGE_Skin_Normal_B_hs02715807686742   
SAGE_Stomach_adenocarcinoma_MD_HG79371412   
SAGE_Stomach_carcinoma_B_xenograft_X1016974912   
SAGE_Uterus_Normal_B_hs01946452623812   
SAGE_White_Blood_Cells_monocyte_normal_AP_A19991312   
SAGE_White_Blood_Cells_monocytes_normal_AP_A29878612   
SAGE_Bladder_Cancer_B_hs02645833968351   
SAGE_Brain_astrocytoma_grade_III_B_40710831211   
SAGE_Brain_astrocytoma_grade_II_B_H12711448911   
SAGE_Brain_astrocytoma_grade_II_B_H38810628511   
SAGE_Brain_glioblastoma_B_H83310060011   
SAGE_Brain_glioblastoma_B_R2010105311   
SAGE_Brain_glioblastoma_B_R33610232211   
SAGE_Brain_glioblastoma_CL_28d11062411   
SAGE_Breast_Carcinoma_CD24+_C1_IDC314286604331   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGD010986211   
SAGE_Embryonic_stem_cell_normal_CL_hs02383636083341   
SAGE_Lymph_node_Lymphoma_B_hs02045178993361   
SAGE_Peripheral_Blood_Cancer_B_hs04295756848291   
SAGE_Skin_Melanoma_B_hs02765631800411   
SAGE_Skin_Normal_B_hs02816517089441   
SAGE_Thyroid_normal_B_00111593811   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P110287311   
SAGE_Bladder_Cancer_B_hs02654640198230   
SAGE_Breast_Carcinoma_EPCR+_C5_IDC273796568140   
SAGE_Breast_Carcinoma_EPCR+_C6_IDC314208755200   
SAGE_Embryo_Pre-Cancer_B_hs03246893016260   
SAGE_Embryonic_stem_cell_BG01_normal_p20_CL_SHE1920166810   
SAGE_Eye_Retinoblastoma_B_hs038912434232300   
SAGE_Foreskin_normal_B_hs0305394035050   
SAGE_Lymph_node_Lymphoma_B_hs0196479148160   
SAGE_Peripheral_Blood_Cancer_B_hs04306399705150   
SAGE_Skin_Cancer_B_hs0279570329860   
SAGE_Skin_Cancer_B_hs0280361849860   
SAGE_Skin_Cancer_B_hs02833692239130   
SAGE_Skin_Cancer_B_hs02843892507100   
SAGE_Skin_Melanoma_B_hs02733881770100   
SAGE_Skin_Melanoma_B_hs02743895211140   
SAGE_Skin_Normal_B_hs02775269789210   
SAGE_Skin_Normal_B_hs0278304222130   
SAGE_Skin_Normal_B_hs02824411636110   
SAGE_Vein_normal_B_hs02306755622250   
SAGE_Vein_normal_B_hs02376135688250