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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Digital Northern Results

Search query: GCTCTAGGCT

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Tags per 200,000 <2 <4 <8 <16 <32 <64 <128 <256 <512 >512

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Tag CountsTags per
200,000
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Code
SAGE_Ovary_normal_CL_IOSE29EC-1147159312   
SAGE_Pancreas_normal_CS_HX31985212   
SAGE_Colon_adenocarcinoma_CL_RKO51294311   
SAGE_Colon_adenocarcinoma_CL_Caco26068239   
SAGE_Ovary_endometriosis_CL_E127609737   
SAGE_Brain_ependymoma_B_11506237326   
SAGE_Brain_oligodendroglioma_B_10013244216   
SAGE_Cartilage_chondrosarcoma_grade_1_CL_UIIC03308116   
SAGE_Pancreas_adenocarcinoma_B_96-62523321316   
SAGE_Prostate_carcinoma_CL_A+3029816   
SAGE_Brain_astrocytoma_grade_I_B_H10437592225   
SAGE_Brain_glioblastoma_hypoxia_CL_H2477176525   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIEK03774715   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Normal_Oxygen7928425   
SAGE_Skin_normal_B_NS3661515   
SAGE_Brain_fetal_normal_B_S130554674   
SAGE_Brain_medulloblastoma_CL_H3414392014   
SAGE_Brain_normal_cortex_B_BB5429423324   
SAGE_Breast_carcinoma_CL_MDA435H244663114   
SAGE_Breast_carcinoma_metastasis_B_24979414   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGX08843924   
SAGE_Colon_adenocarcinoma_B_Tu984137114   
SAGE_Eye_lens_B_UIHI08589824   
SAGE_Kidney_embryonic_CL_293-control4195514   
SAGE_Lymph_Node_normal_B_19942624   
SAGE_Brain_Medulloblastoma_CL_425C26264213   
SAGE_Brain_ependymoma_B_R5825218913   
SAGE_Brain_ependymoma_B_R62812043123   
SAGE_Brain_glioblastoma_B_H135312480523   
SAGE_Brain_glioblastoma_CL_H3925599013   
SAGE_Brain_glioblastoma_CL_H54+EGFRvIII5698213   
SAGE_Breast_Carcinoma_EPCR+_C6_IDC314208755723   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_PE25013213   
SAGE_Breast_metastatic_carcinoma_B_LN26034313   
SAGE_Colon_adenocarcinoma_CL_HCT1165564113   
SAGE_Ovary_adenocarcinoma_B_OVT-75351413   
SAGE_Ovary_cystadenoma_CL_ML10-105514413   
SAGE_Prostate_carcinoma_CL_LNCaP6025013   
SAGE_Stomach_carcinoma_B_xenograph_X435162013   
SAGE_Vascular_normal_CS_VEGF+5731613   
SAGE_White_Blood_Cells_lung_macrophage_normal_AP_L15187213   
SAGE_White_Blood_Cells_monocyte_depleted_mononuclear_cells_normal_AP_P15163413   
SAGE_Brain_Medulloblastoma_CL_425Otx2siRNA9729112   
SAGE_Brain_astrocytoma_grade_III_B_8289993912   
SAGE_Brain_astrocytoma_grade_III_B_H2729605912   
SAGE_Brain_astrocytoma_grade_II_B_H5638856812   
SAGE_Brain_glioblastoma_B_H1425C8899012   
SAGE_Brain_glioblastoma_CL_H54+LacZ6690812   
SAGE_Brain_medulloblastoma_B_DL76839212   
SAGE_Breast_Carcinoma_CD24+_C1_IDC314286604482   
SAGE_Breast_carcinoma_MD_LCIS6783412   
SAGE_Breast_carcinoma_epithelium_BerEP4+AP_IDC77341012   
SAGE_Breast_normal_epithelium_CD24+_AP_N57646912   
SAGE_Breast_normal_epithelium_MUC1+_AP_N57622712   
SAGE_Cartilage_chondrosarcoma_grade_2_CL_UIGE07775712   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Anoxia7905312   
SAGE_Lung_adenocarcinoma_MD_L108688712   
SAGE_Retina_Retinoblastoma_B_18849012   
SAGE_Stomach_adenocarcinoma_MD_HG79371412   
SAGE_Vascular_endothelium_normal_liver_associated_AP_NLEC17775912   
SAGE_Brain_astrocytoma_grade_III_B_58410300811   
SAGE_Brain_astrocytoma_grade_III_B_H97010698211   
SAGE_Brain_astrocytoma_grade_III_B_R92710734411   
SAGE_Brain_astrocytoma_grade_II_B_H51610811611   
SAGE_Brain_astrocytoma_grade_II_B_H51811602211   
SAGE_Brain_glioblastoma_CL_stem_cells10841411   
SAGE_Breast_Normal_Epithelium_CD44+_N6_N48104876561   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGD010986211   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGP010831911   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES115173511   
SAGE_Embryonic_stem_cell_HES4_normal_p36_CL_SHE1120923221   
SAGE_Eye_Retinoblastoma_B_hs038912434232931   
SAGE_Retina_Macula_normal_B_4Mac10141711   
SAGE_Skin_Melanoma_B_hs02765631800301   
SAGE_Vein_normal_B_hs02306755622591   
SAGE_Bladder_Cancer_B_hs0240621642630   
SAGE_Bladder_Cancer_B_hs02664244612130   
SAGE_Breast_Carcinoma_CD24+_C2_IDC34472096080   
SAGE_Breast_Carcinoma_CD24+_C3_IDC384117410170   
SAGE_Breast_Carcinoma_CD24+_C4_IDC40357091010   
SAGE_Breast_Carcinoma_EPCR+_C5_IDC27379656860   
SAGE_Breast_Normal_Epithelium_CD24+_N1_N339646880380   
SAGE_Breast_Normal_Epithelium_CD24+_N2_N3513584223530   
SAGE_Breast_Normal_Epithelium_CD24+_N3_N473036002110   
SAGE_Breast_Normal_Epithelium_CD24+_N4_N48180227420   
SAGE_Breast_Normal_Epithelium_CD44+_N5_N47189093840   
SAGE_Breast_Normal_Epithelium_CD44+_N7_N5811007864140   
SAGE_Embryo_Pre-Cancer_B_hs0324689301630   
SAGE_Embryonic_stem_cell_H13_normal_p22_CL_SHE1522110110   
SAGE_Embryonic_stem_cell_H1_normal_p31_CL_SHE1727620310   
SAGE_Embryonic_stem_cell_H7_normal_p33_CL_SHE1327246510   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES240143210   
SAGE_Embryonic_stem_cell_HES3_normal_p16_CL_SHE1020535310   
SAGE_Embryonic_stem_cell_HSF6_normal_p50_CL_SHES922448810   
SAGE_Embryonic_stem_cell_normal_CL_hs0238363608330   
SAGE_Foreskin_normal_B_hs0305394035020   
SAGE_Peripheral_Blood_Cancer_B_hs0429575684860   
SAGE_Skin_Cancer_B_hs0279570329890   
SAGE_Skin_Cancer_B_hs0280361849820   
SAGE_Skin_Cancer_B_hs0283369223940   
SAGE_Skin_Cancer_B_hs0284389250740   
SAGE_Skin_Melanoma_B_hs02733881770120   
SAGE_Skin_Melanoma_B_hs0274389521170   
SAGE_Skin_Melanoma_B_hs02754128221150   
SAGE_Skin_Normal_B_hs0271580768660   
SAGE_Skin_Normal_B_hs0272439755050   
SAGE_Skin_Normal_B_hs02775269789130   
SAGE_Skin_Normal_B_hs0278304222120   
SAGE_Skin_Normal_B_hs0281651708980   
SAGE_Testis_Embryonal_Carcinoma_CL_hs0212637016160   
SAGE_Testis_Embryonal_Carcinoma_CL_hs0213593549030   
SAGE_Urothelium_normal_B_hs0239311430740   
SAGE_Uterus_Normal_B_hs01946452623120   
SAGE_Uterus_normal_B_hs0195371846390   
SAGE_Vein_normal_B_hs02376135688170