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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Digital Northern Results

Search query: GCGACTCAAG

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Tags per 200,000 <2 <4 <8 <16 <32 <64 <128 <256 <512 >512

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Tag CountsTags per
200,000
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Code
SAGE_Skin_melanoma_B_DB241338629   
SAGE_Kidney_normal_B_140993314   
SAGE_Brain_astrocytoma_grade_II_B_H127114489712   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Normal_Oxygen79284512   
SAGE_Colon_carcinoma_CL_Hct116_wildtype_p53_Anoxia79015410   
SAGE_Ovary_carcinoma_CL_A27802136919   
SAGE_Uterus_endometrium_normal_CS_DI12199119   
SAGE_Brain_meningioma_grade_II_B_SF36224485728   
SAGE_Brain_glioblastoma_CL_H3925599027   
SAGE_Brain_glioblastoma_CL_H54+EGFRvIII5698227   
SAGE_Universal_reference_human_RNA_CL5172927   
SAGE_Brain_Medulloblastoma_CL_425Otx2siRNA9729136   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_IDC285795626   
SAGE_Ovary_adenocarcinoma_B_OVT-83198716   
SAGE_Bone_Marrow_Cancer_FS_hs040549000371395   
SAGE_Brain_meningioma_grade_I_B_SF42716925325   
SAGE_Brain_normal_peds_cortex_B_H15717755425   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Anoxia7905325   
SAGE_Embryonic_stem_cell_H1_normal_p54_CL_SHE1621821465   
SAGE_Skin_normal_B_NS3661515   
SAGE_Brain_medulloblastoma_CL_H3414392014   
SAGE_Brain_meningioma_grade_II_B_SF21764871114   
SAGE_Brain_normal_substantia_nigra_B_14177314   
SAGE_Breast_carcinoma_CL_MDA435H244663114   
SAGE_Breast_carcinoma_MD_DCIS4078314   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGX08843924   
SAGE_GallBladder_Normal_B_HN8570624   
SAGE_Kidney_embryonic_CL_293-control4195514   
SAGE_Prostate_carcinoma_CL_LNCaP-T4354214   
SAGE_Brain_astrocytoma_grade_III_B_43910782423   
SAGE_Brain_astrocytoma_grade_III_B_R14011873323   
SAGE_Brain_astrocytoma_grade_II_B_H50112830923   
SAGE_Brain_astrocytoma_grade_II_B_H53010243923   
SAGE_Brain_ependymoma_B_11506237313   
SAGE_Brain_ependymoma_B_13945631413   
SAGE_Brain_ependymoma_B_R62812043123   
SAGE_Brain_glioblastoma_B_R2010105323   
SAGE_Brain_glioblastoma_CL_stem_cells10841423   
SAGE_Brain_medulloblastoma_B_H13225949813   
SAGE_Brain_medulloblastoma_B_H3066045413   
SAGE_Brain_medulloblastoma_CL_4-HCR6659913   
SAGE_Brain_meningioma_grade_I_B_SF44655464713   
SAGE_Brain_normal_cerebellum_B_15038513   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC86652013   
SAGE_Breast_normal_B_gestational hyperplasia16170413   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N156399413   
SAGE_Colon_adenocarcinoma_CL_RKO5129413   
SAGE_Embryonic_stem_cell_H13_normal_p22_CL_SHE1522110143   
SAGE_Prostate_carcinoma_CL_LNCaP_no-DHT6216013   
SAGE_Retina_macula_normal_B_HMAC210241723   
SAGE_Stomach_adenocarcinoma_MD_HS295883113   
SAGE_Stomach_carcinoma_B_G1896307513   
SAGE_Testis_Embryonal_Carcinoma_CL_hs02135935490983   
SAGE_Brain_ependymoma_B_R3537382212   
SAGE_Brain_glioblastoma_hypoxia_CL_H2477176512   
SAGE_Brain_medulloblastoma_B_97-05-P0156997112   
SAGE_Brain_medulloblastoma_B_H2757231812   
SAGE_Brain_normal_leptomeninges_B_AL27247312   
SAGE_Breast_carcinoma_associated_stroma_B_IDC76802412   
SAGE_Breast_normal_stroma_AP_17915212   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIFK08594412   
SAGE_Colon_carcinoma_CL_Hct116_wildtype_p53_Normal_Oxygen8039812   
SAGE_Embryonic_stem_cell_BG01_normal_p20_CL_SHE1920166832   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES115173522   
SAGE_GallBladder_Adenocarcinoma_B_HAIIb6698812   
SAGE_Lung_tumor_associated_chronic_inflammation_B_UIHM09896212   
SAGE_Pelvis_mixoid_chondrosarcoma_grade2_B_UIHT08357712   
SAGE_Prostate_normal_epithelium_CS_senescent7171712   
SAGE_White_Blood_Cells_monocyte_normal_AP_A19991312   
SAGE_Brain_astrocytoma_grade_III_B_H97010698211   
SAGE_Brain_astrocytoma_grade_III_B_R92710734411   
SAGE_Brain_astrocytoma_grade_II_B_H35910576411   
SAGE_Brain_ependymoma_B_R102312269011   
SAGE_Brain_glioblastoma_CL_28d11062411   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGP010831911   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES240143241   
SAGE_Kidney_carcinoma_B_D210028111   
SAGE_Retina_Macula_normal_B_4Mac10141711   
SAGE_Testis_Embryonal_Carcinoma_CL_hs02126370161511   
SAGE_White_Blood_Cells_monocytes_normal_AP_C110165611   
SAGE_Bladder_Cancer_B_hs0240621642670   
SAGE_Bladder_Cancer_B_hs0266424461230   
SAGE_Bone_Marrow_Normal_FS_hs04044842547170   
SAGE_Breast_Carcinoma_CD24+_C1_IDC314286604100   
SAGE_Breast_Carcinoma_CD24+_C2_IDC34472096050   
SAGE_Breast_Carcinoma_CD24+_C3_IDC384117410100   
SAGE_Breast_Carcinoma_CD24+_C4_IDC40357091080   
SAGE_Breast_Carcinoma_EPCR+_C5_IDC27379656820   
SAGE_Breast_Carcinoma_EPCR+_C6_IDC314208755100   
SAGE_Breast_Carcinoma_SSEA4+_C7_IDC40338124020   
SAGE_Breast_Normal_Epithelium_CD24+_N1_N339646880320   
SAGE_Breast_Normal_Epithelium_CD24+_N2_N3513584223370   
SAGE_Breast_Normal_Epithelium_CD24+_N3_N47303600260   
SAGE_Breast_Normal_Epithelium_CD24+_N4_N48180227470   
SAGE_Breast_Normal_Epithelium_CD44+_N6_N48104876510   
SAGE_Embryo_Pre-Cancer_B_hs0324689301630   
SAGE_Embryonic_stem_cell_H1_normal_p31_CL_SHE1727620310   
SAGE_Embryonic_stem_cell_H7_normal_p33_CL_SHE1327246510   
SAGE_Embryonic_stem_cell_HES3_normal_p16_CL_SHE1020535310   
SAGE_Embryonic_stem_cell_HES4_normal_p36_CL_SHE1120923210   
SAGE_Embryonic_stem_cell_HSF6_normal_p50_CL_SHES922448810   
SAGE_Embryonic_stem_cell_normal_CL_hs02383636083120   
SAGE_Eye_Retinoblastoma_B_hs03891243423230   
SAGE_Foreskin_normal_B_hs0305394035020   
SAGE_Lymph_node_Lymphoma_B_hs02045178993100   
SAGE_Peripheral_Blood_Cancer_B_hs04295756848190   
SAGE_Peripheral_Blood_Cancer_B_hs04306399705100   
SAGE_Skin_Cancer_B_hs0279570329850   
SAGE_Skin_Cancer_B_hs0280361849830   
SAGE_Skin_Cancer_B_hs0283369223930   
SAGE_Skin_Melanoma_B_hs02754128221110   
SAGE_Skin_Melanoma_B_hs02765631800280   
SAGE_Skin_Normal_B_hs0271580768670   
SAGE_Skin_Normal_B_hs0272439755070   
SAGE_Skin_Normal_B_hs0278304222130   
SAGE_Skin_Normal_B_hs0281651708920   
SAGE_Uterus_Normal_B_hs01946452623100   
SAGE_Uterus_normal_B_hs0195371846390   
SAGE_Vein_normal_B_hs0230675562230   
SAGE_Vein_normal_B_hs0237613568820