Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
SAGE Genie
  • Human SAGE Genie Tools
  • Downloads
  • Digital Karyotyping
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Digital Northern Results

Search query: GCCTTTTACT

Color Code                              
Tags per 200,000 <2 <4 <8 <16 <32 <64 <128 <256 <512 >512

LibraryTotal Tags
in Library
Tag CountsTags per
200,000
Color
Code
SAGE_Pancreas_adenocarcinoma_CL_CAPAN137674315   
SAGE_Brain_medulloblastoma_B_H48457469310   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES24014322110   
SAGE_Brain_Medulloblastoma_CL_425C26264239   
SAGE_Colon_adenocarcinoma_CL_SW8376114839   
SAGE_Ovary_carcinoma_CL_A27802136919   
SAGE_Prostate_carcinoma_CL_LNCaP-T4354229   
SAGE_Brain_medulloblastoma_CL_mhh-14785828   
SAGE_Breast_carcinoma_CL_MDA435H244663128   
SAGE_Brain_ependymoma_B_R5108407337   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES115173567   
SAGE_Ovary_cystadenoma_CL_ML10-105514427   
SAGE_Brain_medulloblastoma_B_H3066045426   
SAGE_Brain_medulloblastoma_CL_D2836631626   
SAGE_Breast_normal_organoid_B5818126   
SAGE_Colon_adenocarcinoma_CL_Caco26068226   
SAGE_Embryonic_stem_cell_H1_normal_p54_CL_SHE1621821476   
SAGE_Embryonic_stem_cell_HES4_normal_p36_CL_SHE1120923276   
SAGE_Embryonic_stem_cell_HSF6_normal_p50_CL_SHES922448876   
SAGE_Testis_Embryonal_Carcinoma_CL_hs021359354901966   
SAGE_Bone_marrow_normal_B_D013657715   
SAGE_Brain_astrocytoma_grade_I_B_H10437592225   
SAGE_Brain_medulloblastoma_B_H2757231825   
SAGE_Breast_Carcinoma_CD24+_C2_IDC3447209601215   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_IDC263936115   
SAGE_Embryonic_stem_cell_H1_normal_p31_CL_SHE1727620385   
SAGE_Vascular_endothelium_normal_liver_associated_AP_NLEC17775925   
SAGE_Brain_Medulloblastoma_CL_425Otx2siRNA9729124   
SAGE_Brain_astrocytoma_grade_III_B_H2729605924   
SAGE_Brain_ependymoma_B_2394665314   
SAGE_Brain_glioblastoma_B_R709909924   
SAGE_Brain_medulloblastoma_B_98-04-P4944306814   
SAGE_Brain_medulloblastoma_B_98-05-P6084845114   
SAGE_Brain_medulloblastoma_B_98-13-P3014534214   
SAGE_Breast_Normal_Epithelium_CD44+_N7_N58110078642474   
SAGE_Breast_carcinoma_CL_MDA435H484032314   
SAGE_Breast_carcinoma_metastasis_B_24979414   
SAGE_Breast_normal_epithelium_CD24+_AP_N24155114   
SAGE_GallBladder_Adenocarcinoma_B_C018138024   
SAGE_Kidney_embryonic_CL_293-control4195514   
SAGE_Lung_normal_CL_L154222614   
SAGE_Ovary_adenocarcinoma_B_OVT-64144314   
SAGE_Ovary_normal_CL_IOSE29EC-114715914   
SAGE_Testis_Embryonal_Carcinoma_CL_hs021263701611544   
SAGE_Thyroid_follicular_carcinoma_B_TT00412466434   
SAGE_Brain_astrocytoma_grade_III_B_43910782423   
SAGE_Brain_astrocytoma_grade_III_B_H97010698223   
SAGE_Brain_astrocytoma_grade_II_B_H12711448923   
SAGE_Brain_ependymoma_B_11506237313   
SAGE_Brain_ependymoma_B_R102312269023   
SAGE_Brain_ependymoma_B_R4555182513   
SAGE_Brain_glioblastoma_B_GBM10625976213   
SAGE_Brain_glioblastoma_B_pooled5642813   
SAGE_Brain_glioblastoma_CL_H3925599013   
SAGE_Brain_medulloblastoma_B_H13225949813   
SAGE_Brain_medulloblastoma_CL_4-HCR6659913   
SAGE_Breast_carcinoma_CL_MCF7estradiol_3h6016213   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC76509113   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS-26616813   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_IDC285795613   
SAGE_Breast_normal_B_gestational hyperplasia16170413   
SAGE_Breast_normal_epithelium_CD44+_AP_N25600813   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N15722213   
SAGE_Colon_adenocarcinoma_CL_HCT1165564113   
SAGE_Embryonic_stem_cell_H14_normal_p22_CL_SHE1421217043   
SAGE_Prostate_carcinoma_CL_LNCaP6025013   
SAGE_Prostate_carcinoma_CL_LNCaP_no-DHT6216013   
SAGE_Prostate_normal_B_26405813   
SAGE_Retina_macula_normal_B_HMAC210241723   
SAGE_Stomach_adenocarcinoma_MD_HS295883113   
SAGE_Brain_Medulloblastoma_CL_UW228-N9493712   
SAGE_Brain_Medulloblastoma_CL_UW228-V28082712   
SAGE_Brain_ependymoma_B_H5806861412   
SAGE_Brain_ependymoma_B_R3537382212   
SAGE_Brain_glioblastoma_B_H1425C8899012   
SAGE_Brain_glioblastoma_CL_H54+LacZ6690812   
SAGE_Brain_medulloblastoma_B_97-05-P0156997112   
SAGE_Brain_medulloblastoma_B_97-05-P3127429512   
SAGE_Brain_medulloblastoma_B_98-09-P5588598412   
SAGE_Brain_medulloblastoma_B_H8766740412   
SAGE_Brain_medulloblastoma_B_H9728537612   
SAGE_Breast_Carcinoma_CD24+_C4_IDC403570910442   
SAGE_Breast_Normal_Epithelium_CD44+_N5_N471890938242   
SAGE_Breast_carcinoma_B_IDC-36889112   
SAGE_Breast_carcinoma_MD_LCIS6783412   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS67285712   
SAGE_Breast_carcinoma_epithelium_BerEP4+AP_IDC77341012   
SAGE_Breast_normal_epithelium_CD24+_AP_N57646912   
SAGE_Breast_normal_epithelium_CD44+_AP_N58046412   
SAGE_Breast_normal_myoepithelium_CD10+_AP_IDC76900612   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N57617312   
SAGE_Colon_carcinoma_CL_Hct116_wildtype_p53_Normal_Oxygen8039812   
SAGE_Embryonic_stem_cell_BG01_normal_p20_CL_SHE1920166832   
SAGE_Embryonic_stem_cell_H7_normal_p33_CL_SHE1327246542   
SAGE_Embryonic_stem_cell_HES3_normal_p16_CL_SHE1020535332   
SAGE_Lung_adenocarcinoma_MD_L108688712   
SAGE_Lymph_Node_Lymphoma_B_17200812   
SAGE_Lymph_Node_normal_B_19942612   
SAGE_Ovary_endometriosis_CL_E127609712   
SAGE_Placenta_first_trimester_normal_B_18926512   
SAGE_Stomach_normal_MD_14S7335312   
SAGE_Bladder_Cancer_B_hs02413335801301   
SAGE_Bone_Marrow_Cancer_FS_hs04054900037451   
SAGE_Brain_astrocytoma_grade_III_B_34310015811   
SAGE_Brain_astrocytoma_grade_III_B_R14011873311   
SAGE_Brain_astrocytoma_grade_III_B_R92710734411   
SAGE_Brain_astrocytoma_grade_II_B_H50112830911   
SAGE_Brain_astrocytoma_grade_II_B_H51610811611   
SAGE_Brain_astrocytoma_grade_II_B_H53010243911   
SAGE_Brain_ependymoma_B_R62812043111   
SAGE_Brain_glioblastoma_B_H135312480511   
SAGE_Brain_glioblastoma_B_H83310060011   
SAGE_Brain_glioblastoma_B_R2010105311   
SAGE_Brain_glioblastoma_CL_28d11062411   
SAGE_Brain_glioblastoma_CL_4d11521211   
SAGE_Brain_glioblastoma_CL_stem_cells10841411   
SAGE_Breast_Carcinoma_CD24+_C3_IDC384117410391   
SAGE_Breast_Carcinoma_SSEA4+_C7_IDC403381240301   
SAGE_Breast_Normal_Epithelium_CD24+_N4_N481802274101   
SAGE_Breast_Normal_Epithelium_CD44+_N6_N48104876561   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGD010986211   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGP010831911   
SAGE_Embryonic_stem_cell_normal_CL_hs02383636083301   
SAGE_Eye_Retinoblastoma_B_hs038912434232731   
SAGE_Lymph_node_Lymphoma_B_hs01964791481461   
SAGE_Lymph_node_Lymphoma_B_hs02045178993271   
SAGE_Retina_Macula_normal_B_4Mac10141711   
SAGE_Retina_Peripheral_normal_B_210531211   
SAGE_Retina_normal_B_4cRet10370111   
SAGE_Uterus_Normal_B_hs01946452623461   
SAGE_White_Blood_Cells_monocytes_normal_AP_C110165611   
SAGE_Bladder_Cancer_B_hs0240621642630   
SAGE_Bladder_Cancer_B_hs0264583396880   
SAGE_Bladder_Cancer_B_hs02654640198110   
SAGE_Bladder_Cancer_B_hs0266424461260   
SAGE_Bone_Marrow_Normal_FS_hs0404484254770   
SAGE_Breast_Carcinoma_CD24+_C1_IDC314286604130   
SAGE_Breast_Carcinoma_EPCR+_C5_IDC27379656860   
SAGE_Breast_Carcinoma_EPCR+_C6_IDC314208755160   
SAGE_Breast_Normal_Epithelium_CD24+_N1_N33964688070   
SAGE_Breast_Normal_Epithelium_CD24+_N2_N3513584223150   
SAGE_Breast_Normal_Epithelium_CD24+_N3_N473036002150   
SAGE_Embryo_Pre-Cancer_B_hs0324689301650   
SAGE_Embryonic_stem_cell_H13_normal_p22_CL_SHE1522110110   
SAGE_Foreskin_normal_B_hs0305394035020   
SAGE_Peripheral_Blood_Cancer_B_hs04295756848150   
SAGE_Peripheral_Blood_Cancer_B_hs0430639970590   
SAGE_Skin_Cancer_B_hs02795703298260   
SAGE_Skin_Cancer_B_hs0283369223920   
SAGE_Skin_Cancer_B_hs0284389250740   
SAGE_Skin_Melanoma_B_hs0273388177080   
SAGE_Skin_Melanoma_B_hs0274389521120   
SAGE_Skin_Melanoma_B_hs0275412822120   
SAGE_Skin_Melanoma_B_hs02765631800120   
SAGE_Skin_Normal_B_hs02715807686110   
SAGE_Skin_Normal_B_hs0272439755060   
SAGE_Skin_Normal_B_hs0277526978990   
SAGE_Skin_Normal_B_hs0278304222130   
SAGE_Skin_Normal_B_hs0281651708960   
SAGE_Skin_Normal_B_hs0282441163650   
SAGE_Uterus_normal_B_hs01953718463150   
SAGE_Vein_normal_B_hs02306755622140   
SAGE_Vein_normal_B_hs02376135688180