Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
SAGE Genie
  • Human SAGE Genie Tools
  • Downloads
  • Digital Karyotyping
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Digital Northern Results

Search query: GCCTTGATGA

Color Code                              
Tags per 200,000 <2 <4 <8 <16 <32 <64 <128 <256 <512 >512

LibraryTotal Tags
in Library
Tag CountsTags per
200,000
Color
Code
SAGE_Breast_Normal_Epithelium_CD24+_N3_N473036002103067   
SAGE_Brain_ependymoma_B_R455518251765   
SAGE_Breast_Carcinoma_CD24+_C4_IDC403570910101957   
SAGE_Lung_adenocarcinoma_B_1362561055   
SAGE_Breast_Normal_Epithelium_CD24+_N2_N3513584223356052   
SAGE_Breast_carcinoma_CL_MCF7estradiol_10H607251652   
SAGE_Breast_Normal_Epithelium_CD24+_N4_N48180227446851   
SAGE_Breast_carcinoma_CL_MCF7estradiol_3h601621549   
SAGE_Prostate_carcinoma_CL_PC3_Mock38819946   
SAGE_Breast_carcinoma_CL_MCF7control_0h598771343   
SAGE_Liver_cholangiocarcinoma_B_K2D468531042   
SAGE_Breast_normal_epithelium_BEREP4+_AP_N1487291041   
SAGE_Ovary_normal_CS_HOSE_4477281041   
SAGE_Breast_normal_epithelium_CD24+_AP_N5764691539   
SAGE_Ovary_adenocarcinoma_B_OVT-641443838   
SAGE_Pancreas_adenocarcinoma_CL_CAPAN137674737   
SAGE_Lymph_Node_Lymphoma_B_1720081336   
SAGE_Lung_normal_B_1887081431   
SAGE_Stomach_carcinoma_B_G189630751031   
SAGE_Breast_carcinoma_CL_ZR75_1_estrogen38797630   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIFK0859441330   
SAGE_Ovary_adenocarcinoma_B_OVT-753514829   
SAGE_Breast_Carcinoma_EPCR+_C6_IDC31420875559428   
SAGE_Breast_Carcinoma_SSEA4+_C7_IDC40338124048928   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGP01083191527   
SAGE_Lung_adenocarcinoma_MD_L10868871227   
SAGE_Stomach_adenocarcinoma_B_G23464925927   
SAGE_Universal_reference_human_RNA_CL51729727   
SAGE_Brain_medulloblastoma_B_96-04-P01952645726   
SAGE_Liver_cholangiocarcinoma_CL_K452973726   
SAGE_Breast_Normal_Epithelium_CD44+_N5_N47189093823825   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS-266168824   
SAGE_Breast_normal_epithelium_CD24+_AP_N241551524   
SAGE_Breast_Normal_Epithelium_CD24+_N1_N339646880114123   
SAGE_Vascular_endothelium_normal_liver_associated_AP_NLEC177759923   
SAGE_Bone_marrow_normal_AP_CD34+/CD38+/lin+81595922   
SAGE_Brain_ependymoma_B_R58252189622   
SAGE_Breast_Carcinoma_CD24+_C1_IDC31428660448422   
SAGE_Thyroid_normal_B_0011159381322   
SAGE_Lymph_node_Lymphoma_B_hs0204517899355721   
SAGE_Stomach_normal_MD_14S73353821   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_IDC2857956620   
SAGE_Breast_normal_organoid_B58181620   
SAGE_Kidney_Glomeruli_Normal_B_bjballer148905520   
SAGE_Retina_Peripheral_normal_B_21053121120   
SAGE_Uterus_normal_B_hs0195371846338520   
SAGE_Breast_Carcinoma_CD24+_C3_IDC38411741040219   
SAGE_Breast_carcinoma_CL_ZR75_1_tamoxifen40052419   
SAGE_GallBladder_Adenocarcinoma_B_C0181380819   
SAGE_Prostate_carcinoma_CL_PC3_AS240768419   
SAGE_Bone_marrow_normal_AP_CD34+/CD38-/lin-86391818   
SAGE_Brain_glioblastoma_B_R7099099918   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC866520618   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGX088439818   
SAGE_Ovary_adenocarcinoma_B_OVT-831987318   
SAGE_Placenta_normal_B_11180831118   
SAGE_Retinal_Pigment_Epithelium_normal_B_4MacRPE77262718   
SAGE_Brain_ependymoblastoma_B_81933975317   
SAGE_Brain_glioblastoma_CS_TA246678417   
SAGE_Pancreas_adenocarcinoma_B_91-1611333582317   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P1102873917   
SAGE_Bone_marrow_normal_B_D0136577316   
SAGE_Brain_medulloblastoma_B_97-05-P31274295616   
SAGE_Brain_medulloblastoma_CL_mhh-147858416   
SAGE_Skin_Cancer_B_hs0279570329846416   
SAGE_Breast_carcinoma_B_IDC-464095515   
SAGE_Retina_Retinoblastoma_B_188490715   
SAGE_Skin_Melanoma_B_hs0275412822132215   
SAGE_Stomach_normal_B_antrum26653215   
SAGE_Breast_carcinoma_B_IDC-368891514   
SAGE_Breast_carcinoma_epithelium_PROCR+_AP_IDC2954080414   
SAGE_Breast_normal_myoepithelium_CL_HME5055516414   
SAGE_White_Blood_Cells_monocytes_normal_AP_P254426414   
SAGE_Brain_ependymoma_B_R51275379513   
SAGE_Brain_glioblastoma_B_GBM106259762413   
SAGE_Brain_glioblastoma_control_CL_H24760428413   
SAGE_Brain_glioblastoma_hypoxia_CL_H24771765513   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC873967513   
SAGE_Breast_carcinoma_epithelium_BerEP4+AP_IDC773410513   
SAGE_Breast_metastatic_carcinoma_B_LN260343413   
SAGE_Colon_adenocarcinoma_CL_SW83761148413   
SAGE_Skin_Melanoma_B_hs0276563180038913   
SAGE_White_Blood_Cells_monocyte_normal_AP_P1101158713   
SAGE_Brain_Medulloblastoma_CL_UW228-N94937612   
SAGE_Brain_astrocytoma_grade_III_B_407108312712   
SAGE_Brain_astrocytoma_grade_III_B_439107824712   
SAGE_Brain_ependymoma_B_115062373412   
SAGE_Brain_ependymoma_B_23946653312   
SAGE_Brain_medulloblastoma_B_98-05-P60848451312   
SAGE_Breast_Normal_Epithelium_CD44+_N7_N581100786469812   
SAGE_Breast_carcinoma_CL_MDA435C47270312   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC965935412   
SAGE_Heart_normal_B_183063512   
SAGE_Lung_tumor_associated_chronic_inflammation_B_UIHM098962612   
SAGE_Pancreas_adenocarcinoma_B_96-625233213212   
SAGE_Peritoneum_mesothelioma_B_1232529212   
SAGE_Prostate_carcinoma_CL_LNCaP_no-DHT62160412   
SAGE_Testis_Embyronal_Carcinoma_B_166352412   
SAGE_Brain_astrocytoma_grade_III_B_R140118733711   
SAGE_Breast_Carcinoma_EPCR+_C5_IDC27379656822711   
SAGE_Breast_carcinoma_MD_LCIS67834411   
SAGE_Breast_normal_FS_NER34565211   
SAGE_Breast_normal_myoepithelium_CD10+_AP_IDC769006411   
SAGE_GallBladder_Adenocarcinoma_B_HAIIb66988411   
SAGE_Lung_adenocarcinoma_MD_L935916211   
SAGE_Peripheral_Blood_Cancer_B_hs0429575684832811   
SAGE_Prostate_normal_epithelium_CS_confluent71897411   
SAGE_Prostate_normal_epithelium_CS_senescent71717411   
SAGE_Skin_Normal_B_hs0272439755025311   
SAGE_Thyroid_follicular_adenoma_B_TT005101578611   
SAGE_Thyroid_follicular_carcinoma_B_TT004124664711   
SAGE_White_Blood_Cells_lung_macrophage_normal_AP_L151872311   
SAGE_White_Blood_Cells_monocyte_depleted_mononuclear_cells_normal_AP_P151634311   
SAGE_Bladder_Cancer_B_hs0240621642632010   
SAGE_Brain_glioblastoma_CL_28d110624610   
SAGE_Breast_carcinoma_B_95-25939364210   
SAGE_Breast_carcinoma_myoepithelium_X_ITGB6+_AP78785410   
SAGE_Breast_normal_epithelium_CD44+_AP_N256008310   
SAGE_Ovary_endometriosis_CL_E1276097410   
SAGE_Stomach_adenocarcinoma_MD_HS2958831310   
SAGE_Bone_Marrow_AML_FS_CD34+CD38+6151939   
SAGE_Brain_glioblastoma_B_H135312480569   
SAGE_Brain_glioblastoma_B_R33610232259   
SAGE_Brain_medulloblastoma_B_H3066045439   
SAGE_Breast_carcinoma_B_DCIS-54309829   
SAGE_Breast_carcinoma_CL_MDA435H484032329   
SAGE_Breast_carcinoma_associated_myoepithelium_CD10+_AP_DCIS68145249   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N156399439   
SAGE_Kidney_carcinoma_B_D210028159   
SAGE_Kidney_embryonic_CL_293-control4195529   
SAGE_Prostate_adenocarcinoma_MD_PR3176495139   
SAGE_Retina_Peripheral_normal_B_4Peri12669169   
SAGE_Retina_macula_normal_B_HMAC210241759   
SAGE_Retina_normal_B_4cRet10370159   
SAGE_Rheumatoid_arthritis_synovial_fibroblast_CS4247229   
SAGE_Skin_melanoma_B_DB24133829   
SAGE_Uterus_endometrium_normal_CS_DI12199119   
SAGE_Brain_Medulloblastoma_CL_425Otx2siRNA9729148   
SAGE_Brain_astrocytoma_grade_III_B_H2729605948   
SAGE_Brain_glioblastoma_B_H1425C8899048   
SAGE_Brain_medulloblastoma_B_97-05-P0156997138   
SAGE_Esophagus_Dysplasia_B_LGD017490438   
SAGE_Ovary_normal_CL_IOSE29EC-114715928   
SAGE_Peripheral_Blood_Cancer_B_hs043063997052748   
SAGE_Skin_Cancer_B_hs028438925071578   
SAGE_Stomach_carcinoma_B_xenograft_X1016974938   
SAGE_Vein_normal_B_hs023761356882658   
SAGE_White_Blood_Cells_monocyte_normal_AP_A19991348   
SAGE_Brain_astrocytoma_grade_III_B_58410300847   
SAGE_Brain_astrocytoma_grade_III_B_H105510988647   
SAGE_Brain_astrocytoma_grade_III_B_H97010698247   
SAGE_Brain_glioblastoma_B_pooled5642827   
SAGE_Breast_carcinoma_associated_stroma_B_DCIS65704927   
SAGE_Breast_normal_epithelium_MUC1+_AP_N57622737   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N57617337   
SAGE_Breast_normal_stroma_AP_17915237   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGD010986247   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES2401432157   
SAGE_GallBladder_Adenocarcinoma_B_NAM017854837   
SAGE_GallBladder_Normal_B_HN8570637   
SAGE_Lymph_node_Lymphoma_B_hs019647914811747   
SAGE_Stomach_carcinoma_B_xenograph_X435162027   
SAGE_Vascular_normal_CS_control5164227   
SAGE_White_Blood_Cells_monocyte_depleted_mononuclear_cells_normal_AP_A15379527   
SAGE_Bladder_Cancer_B_hs026546401981586   
SAGE_Bone_Marrow_Cancer_FS_hs040549000371616   
SAGE_Brain_Medulloblastoma_CL_425C26264226   
SAGE_Brain_astrocytoma_grade_II_B_H12711448946   
SAGE_Brain_astrocytoma_grade_II_B_H50112830946   
SAGE_Brain_medulloblastoma_CL_D2836631626   
SAGE_Breast_Carcinoma_CD24+_C2_IDC3447209601496   
SAGE_Breast_Normal_Epithelium_CD44+_N6_N481048765336   
SAGE_Breast_carcinoma_B_IDC-56045126   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC96353926   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS78918436   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N15722226   
SAGE_Breast_phyllodes_tumor_fibroblasts_AP_0702025957526   
SAGE_Cartilage_chondrosarcoma_grade_2_B_UIGA09384636   
SAGE_Lung_normal_CL_L162898316   
SAGE_Ovary_carcinoma_CL_ES2-13115916   
SAGE_Pancreas_carcinoma_CL_PL452955716   
SAGE_Pancreas_normal_CS_H1263222316   
SAGE_Retinal_Pigment_Epithelium_normal_B_4PeriRPE9019936   
SAGE_Uterus_Normal_B_hs019464526232026   
SAGE_Vascular_normal_CS_VEGF+5731626   
SAGE_White_Blood_Cells_monocytes_normal_AP_A29878636   
SAGE_Bladder_Cancer_B_hs026642446121235   
SAGE_Brain_astrocytoma_grade_III_B_R92710734435   
SAGE_Brain_astrocytoma_grade_II_B_H35910576435   
SAGE_Brain_astrocytoma_grade_II_B_H51610811635   
SAGE_Brain_astrocytoma_grade_II_B_H51811602235   
SAGE_Brain_fetal_normal_B_S130554695   
SAGE_Brain_glioblastoma_B_H83310060035   
SAGE_Brain_glioblastoma_CL_4d11521235   
SAGE_Brain_medulloblastoma_B_12733861415   
SAGE_Brain_medulloblastoma_B_C6097461225   
SAGE_Brain_medulloblastoma_B_H8766740425   
SAGE_Breast_carcinoma_B_95-3476707025   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_IDC263936115   
SAGE_Cartilage_chondrosarcoma_grade_2_CL_UIFU07501925   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIEK03774715   
SAGE_Embryo_Pre-Cancer_B_hs032468930161915   
SAGE_Embryonic_stem_cell_HES4_normal_p36_CL_SHE1120923265   
SAGE_Skin_Cancer_B_hs028036184981035   
SAGE_Skin_Normal_B_hs027158076861695   
SAGE_Vascular_endothelium_hemangioma_B_1467568025   
SAGE_Vein_normal_B_hs023067556221815   
SAGE_White_Blood_Cells_breast_carcinoma_associated_CD45+_AP_IDC73439915   
SAGE_Bladder_Cancer_B_hs02413335801814   
SAGE_Bladder_Cancer_B_hs026458339681314   
SAGE_Brain_astrocytoma_grade_III_B_8289993924   
SAGE_Brain_ependymoma_B_R5108407324   
SAGE_Brain_ependymoma_B_R62812043134   
SAGE_Brain_glioblastoma_B_H13714933814   
SAGE_Brain_medulloblastoma_B_98-04-P4944306814   
SAGE_Brain_medulloblastoma_B_98-13-P3014534214   
SAGE_Brain_meningioma_grade_II_B_SF21764871114   
SAGE_Brain_normal_cerebellum_B_BB5424050014   
SAGE_Breast_carcinoma_CL_MDA435H244663114   
SAGE_Breast_carcinoma_MD_DCIS4078314   
SAGE_Breast_carcinoma_metastasis_B_24979414   
SAGE_Leukocytes_normal_B_14787314   
SAGE_Lung_normal_CL_L154222614   
SAGE_Placenta_first_trimester_normal_B_18926524   
SAGE_Prostate_carcinoma_CL_LNCaP-T4354214   
SAGE_Skin_Normal_B_hs028165170891394   
SAGE_Stomach_normal_MD_13S4590814   
SAGE_Brain_astrocytoma_grade_II_B_H38810628523   
SAGE_Brain_astrocytoma_grade_II_B_H53010243923   
SAGE_Brain_ependymoma_B_13945631413   
SAGE_Brain_ependymoma_B_R102312269023   
SAGE_Brain_glioblastoma_CL_H3925599013   
SAGE_Brain_glioblastoma_CL_H54+EGFRvIII5698213   
SAGE_Brain_medulloblastoma_B_H4845746913   
SAGE_Brain_meningioma_grade_I_B_SF44655464713   
SAGE_Breast_carcinoma_B_BWHT18_DCIS5070113   
SAGE_Breast_carcinoma_associated_myoepithelium_CD10+_AP_DCIS75199313   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC76509113   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_PE25013213   
SAGE_Breast_carcinoma_epithelium_CD44+_AP_ASC35247813   
SAGE_Breast_carcinoma_epithelium_CD44+_AP_PE25234213   
SAGE_Breast_carcinoma_epithelium_PROCR+_AP_IDC285278113   
SAGE_Breast_normal_B_gestational hyperplasia16170413   
SAGE_Breast_normal_epithelium_BEREP4+_AP_N25051213   
SAGE_Breast_normal_stroma_B_IDC85048513   
SAGE_Embryonic_stem_cell_H13_normal_p22_CL_SHE1522110143   
SAGE_Embryonic_stem_cell_H7_normal_p33_CL_SHE1327246553   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES115173533   
SAGE_Liver_cholangiocarcinoma_CL_K35484213   
SAGE_Liver_normal_B_16630813   
SAGE_Muscle_Rhabdomyosarcoma_B_16127013   
SAGE_Muscle_normal_B_old5388913   
SAGE_Muscle_normal_B_young5394713   
SAGE_Ovary_cystadenoma_CL_ML10-105514413   
SAGE_Prostate_carcinoma_CL_LNCaP6025013   
SAGE_Prostate_normal_MD_PR3175927713   
SAGE_Retina_Macula_normal_B_4Mac10141723   
SAGE_Retina_Peripheral_normal_B_15966113   
SAGE_Skin_Cancer_B_hs02833692239673   
SAGE_Skin_Melanoma_B_hs02733881770673   
SAGE_Skin_Melanoma_B_hs02743895211643   
SAGE_Spinal_cord_normal_B_15478513   
SAGE_Vascular_endothelium_normal_breast_associated_P1H12+_AP_15702313   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P25029713   
SAGE_Bone_Marrow_Normal_FS_hs04044842547632   
SAGE_Brain_Medulloblastoma_CL_UW228-V28082712   
SAGE_Brain_astrocytoma_grade_II_B_H5638856812   
SAGE_Brain_astrocytoma_grade_I_B_H10437592212   
SAGE_Brain_ependymoma_B_H5806861412   
SAGE_Brain_ependymoma_B_R3537382212   
SAGE_Brain_glioblastoma_B_H11106898612   
SAGE_Brain_glioblastoma_CL_H54+LacZ6690812   
SAGE_Brain_medulloblastoma_B_98-05-P0408925812   
SAGE_Brain_medulloblastoma_B_H2757231812   
SAGE_Brain_medulloblastoma_B_H9728537612   
SAGE_Brain_normal_cortex_B_BB5429423312   
SAGE_Breast_carcinoma_associated_stroma_B_IDC76802412   
SAGE_Breast_carcinoma_epithelium_X_MUC1+_AP7514712   
SAGE_Breast_normal_epithelium_CD44+_AP_N58046412   
SAGE_Breast_normal_epithelium_MUC1+_AP_N157170412   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Anoxia7905312   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Normal_Oxygen7928412   
SAGE_Colon_carcinoma_CL_Hct116_wildtype_p53_Normal_Oxygen8039812   
SAGE_Embryonic_stem_cell_H14_normal_p22_CL_SHE1421217032   
SAGE_Embryonic_stem_cell_H1_normal_p31_CL_SHE1727620342   
SAGE_Embryonic_stem_cell_HES3_normal_p16_CL_SHE1020535332   
SAGE_Embryonic_stem_cell_HSF6_normal_p50_CL_SHES922448832   
SAGE_Esophagus_Dysplasia_B_HGD027861112   
SAGE_Esophagus_Normal_B_CN017563412   
SAGE_Foreskin_normal_B_hs03053940350512   
SAGE_Lymph_Node_normal_B_19942612   
SAGE_Skin_Normal_B_hs02775269789742   
SAGE_Stomach_adenocarcinoma_MD_HG79371412   
SAGE_Urothelium_normal_B_hs02393114307362   
SAGE_Brain_astrocytoma_grade_III_B_34310015811   
SAGE_Eye_Retinoblastoma_B_hs038912434232951   
SAGE_Placenta_hydatidiform_mole_B_110167711   
SAGE_Skin_Normal_B_hs02783042221281   
SAGE_Skin_Normal_B_hs02824411636431   
SAGE_Testis_Embryonal_Carcinoma_CL_hs02126370161491   
SAGE_Testis_Embryonal_Carcinoma_CL_hs02135935490531   
SAGE_Embryonic_stem_cell_BG01_normal_p20_CL_SHE1920166810   
SAGE_Embryonic_stem_cell_normal_CL_hs02383636083140