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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Digital Northern Results

Search query: GCAGGGCCTC

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Tags per 200,000 <2 <4 <8 <16 <32 <64 <128 <256 <512 >512

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Tag CountsTags per
200,000
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Code
SAGE_Breast_carcinoma_CL_ZR75_1_estrogen387972891489   
SAGE_Breast_carcinoma_CL_ZR75_1_untreated323031801114   
SAGE_Liver_cholangiocarcinoma_CL_K4529732901094   
SAGE_Breast_carcinoma_CL_ZR75_1_tamoxifen40052192958   
SAGE_Liver_cholangiocarcinoma_CL_K354842214780   
SAGE_Colon_normal_B_NC248479165680   
SAGE_Prostate_normal_epithelium_CS_confluent71897240667   
SAGE_Prostate_normal_epithelium_CS_senescent71717209582   
SAGE_Breast_normal_FS_NER3456592532   
SAGE_Colon_normal_B_NC149610128516   
SAGE_Breast_carcinoma_MD_DCIS4078396470   
SAGE_Prostate_adenocarcinoma_MD_PR31764951133409   
SAGE_Bladder_Cancer_B_hs0240621642612293395   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_PE25013270279   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS-26616892278   
SAGE_Breast_normal_myoepithelium_CL_HME505551677277   
SAGE_Breast_carcinoma_B_DCIS-46060576250   
SAGE_Bladder_Cancer_B_hs024133358014144248   
SAGE_Stomach_adenocarcinoma_MD_G3294680257243   
SAGE_Lung_normal_CL_L162898335241   
SAGE_Stomach_carcinoma_B_xenograph_X435162062240   
SAGE_Stomach_adenocarcinoma_MD_HG793714101215   
SAGE_GallBladder_Adenocarcinoma_B_NAM017854878198   
SAGE_GallBladder_Adenocarcinoma_B_HAIIb6698864191   
SAGE_Stomach_normal_MD_14S7335370190   
SAGE_Breast_metastatic_carcinoma_B_LN26034357188   
SAGE_Colon_adenocarcinoma_B_Tu984137139188   
SAGE_Liver_cholangiocarcinoma_B_K2D4685344187   
SAGE_Colon_adenocarcinoma_B_Tu1025570051183   
SAGE_Skin_Normal_B_hs028244116364045183   
SAGE_Breast_carcinoma_epithelium_X_MUC1+_AP7514768180   
SAGE_Stomach_carcinoma_B_G1896307555174   
SAGE_Stomach_carcinoma_B_xenograft_X1016974959169   
SAGE_Pancreas_adenocarcinoma_B_91-161133358228166   
SAGE_Breast_Normal_Epithelium_CD24+_N1_N3396468807951164   
SAGE_Bladder_Cancer_B_hs026642446123268153   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS78918468152   
SAGE_Bladder_Cancer_B_hs026546401983473149   
SAGE_Breast_Normal_Epithelium_CD24+_N2_N35135842239990147   
SAGE_Breast_Carcinoma_CD24+_C3_IDC3841174102871139   
SAGE_Stomach_adenocarcinoma_MD_HS295883141139   
SAGE_Lung_normal_CL_L154222629137   
SAGE_Urothelium_normal_B_hs023931143072029130   
SAGE_Pancreas_adenocarcinoma_CL_CAPAN13767424127   
SAGE_Breast_carcinoma_B_DCIS-54309827125   
SAGE_Skin_Melanoma_B_hs027656318003546125   
SAGE_Stomach_adenocarcinoma_B_G2346492540123   
SAGE_Breast_carcinoma_B_BWHT18_DCIS5070131122   
SAGE_Esophagus_Dysplasia_B_HGD027861148122   
SAGE_Breast_carcinoma_B_95-2593936424121   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC86652040120   
SAGE_Esophagus_Dysplasia_B_LGD017490443114   
SAGE_Stomach_normal_B_antrum2665315112   
SAGE_Breast_normal_epithelium_BEREP4+_AP_N25051227106   
SAGE_Prostate_normal_MD_PR3175927731104   
SAGE_Breast_carcinoma_B_IDC-36889135101   
SAGE_Breast_carcinoma_B_IDC-5604513099   
SAGE_Skin_normal_B_NS366151898   
SAGE_Breast_carcinoma_myoepithelium_X_ITGB6+_AP787853896   
SAGE_Lung_normal_B_1887084090   
SAGE_Stomach_normal_epithelium_B_body1247611188   
SAGE_Pancreas_carcinoma_CL_PL45295571387   
SAGE_Breast_carcinoma_B_95-347670702986   
SAGE_Breast_metastatic_carcinoma_B_LN1450871984   
SAGE_Kidney_carcinoma_B_D21002814283   
SAGE_Breast_Normal_Epithelium_CD24+_N4_N48180227473381   
SAGE_Esophagus_Adenocarcinoma_B_CA1D737933081   
SAGE_Lung_adenocarcinoma_MD_L10868873580   
SAGE_Placenta_first_trimester_normal_B_1892653680   
SAGE_Rheumatoid_arthritis_synovial_fibroblast_CS424721780   
SAGE_Breast_carcinoma_epithelium_BerEP4+AP_IDC7734102979   
SAGE_Stomach_normal_MD_13S459081878   
SAGE_Breast_normal_epithelium_BEREP4+_AP_N1487291977   
SAGE_Skin_Normal_B_hs02816517089250576   
SAGE_Breast_carcinoma_CL_MCF7control_0h598772170   
SAGE_Breast_carcinoma_metastasis_B_2497941768   
SAGE_Lung_adenocarcinoma_B_1362561266   
SAGE_Prostate_carcinoma_CL_LNCaP_no-DHT621601857   
SAGE_Bladder_Cancer_B_hs02645833968164056   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N15639941856   
SAGE_GallBladder_Adenocarcinoma_B_C01813802356   
SAGE_White_Blood_Cells_normal_breast_associated_CD45+_AP31985956   
SAGE_Lung_adenocarcinoma_MD_L9359161055   
SAGE_Breast_fibroadenoma_MD556881553   
SAGE_Skin_Normal_B_hs02775269789135751   
SAGE_Breast_carcinoma_MD_LCIS678341750   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_IDC26393611050   
SAGE_Breast_carcinoma_B_IDC-4640951649   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_IDC28579561448   
SAGE_Breast_carcinoma_CL_MCF7estradiol_3h601621446   
SAGE_GallBladder_Normal_B_HN857062046   
SAGE_Breast_Normal_Epithelium_CD24+_N3_N47303600269045   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC9659351545   
SAGE_Esophagus_Normal_B_CN01756341744   
SAGE_Lung_tumor_associated_chronic_inflammation_B_UIHM0989622244   
SAGE_Skin_Cancer_B_hs0284389250786044   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS6728571643   
SAGE_Prostate_carcinoma_CL_LNCaP602501343   
SAGE_Breast_carcinoma_CL_MCF7estradiol_10H607251342   
SAGE_Foreskin_normal_B_hs0305394035083142   
SAGE_Breast_normal_epithelium_CD24+_AP_N5764691641   
SAGE_Ovary_adenocarcinoma_B_OVT-7535141141   
SAGE_Prostate_normal_B_2640581340   
SAGE_Colon_adenocarcinoma_CL_SW837611481239   
SAGE_Pancreas_carcinoma_CL_ASPC31224638   
SAGE_Skin_Melanoma_B_hs0275412822174636   
SAGE_Universal_reference_human_RNA_CL51729934   
SAGE_Retina_Peripheral_normal_B_1596611033   
SAGE_Placenta_normal_B_11180831932   
SAGE_Skin_Cancer_B_hs0280361849859732   
SAGE_Breast_normal_epithelium_MUC1+_AP_N5762271231   
SAGE_Breast_normal_epithelium_MUC1+_AP_N15717041130   
SAGE_Skin_melanoma_B_DB126032430   
SAGE_Breast_carcinoma_epithelium_PROCR+_AP_IDC2954080829   
SAGE_Skin_Cancer_B_hs0279570329885329   
SAGE_Breast_normal_epithelium_CD24+_AP_N241551628   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC765091927   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS-357402827   
SAGE_Prostate_adenocarcinoma_CL_LNCaP22344326   
SAGE_Prostate_carcinoma_CL_A+30298426   
SAGE_Retina_Peripheral_normal_B_21053121426   
SAGE_Skin_Normal_B_hs0272439755056325   
SAGE_Skin_Normal_B_hs0278304222138225   
SAGE_Pancreas_adenocarcinoma_B_96-625233213424   
SAGE_Skin_Normal_B_hs0271580768671524   
SAGE_Vascular_endothelium_normal_breast_associated_P1H12+_AP_157023724   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N576173923   
SAGE_Breast_Normal_Epithelium_CD44+_N5_N47189093821122   
SAGE_Breast_Carcinoma_EPCR+_C5_IDC27379656841021   
SAGE_Prostate_carcinoma_B_pool266034721   
SAGE_Breast_Carcinoma_CD24+_C4_IDC40357091035920   
SAGE_Breast_normal_organoid_B58181620   
SAGE_Breast_normal_stroma_AP_179152820   
SAGE_Skin_Cancer_B_hs0283369223938620   
SAGE_Breast_normal_B_gestational hyperplasia161704619   
SAGE_Breast_Carcinoma_CD24+_C2_IDC34472096037515   
SAGE_Breast_carcinoma_associated_myoepithelium_CD10+_AP_DCIS681452614   
SAGE_Skin_Melanoma_B_hs0274389521129214   
SAGE_Uterus_normal_B_hs0195371846326614   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC873967513   
SAGE_Retina_macula_normal_B_HMAC2102417713   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Anoxia79053512   
SAGE_Ovary_adenocarcinoma_B_OVT-831987212   
SAGE_Retina_Peripheral_normal_B_4Peri126691812   
SAGE_Breast_carcinoma_associated_stroma_B_IDC768024411   
SAGE_Prostate_carcinoma_CL_PC3_Mock38819210   
SAGE_Pancreas_normal_B_12152019   
SAGE_Prostate_carcinoma_CL_LNCaP-C4002929   
SAGE_Prostate_carcinoma_CL_PC3_AS24076829   
SAGE_White_Blood_Cells_breast_carcinoma_associated_CD45+_AP_DCIS66617639   
SAGE_Brain_ependymoma_B_R5108407337   
SAGE_Breast_Normal_Epithelium_CD44+_N7_N58110078644287   
SAGE_Breast_carcinoma_associated_myoepithelium_CD10+_AP_DCIS75199327   
SAGE_Embryo_Pre-Cancer_B_hs032468930162697   
SAGE_Eye_Retinoblastoma_B_hs0389124342324527   
SAGE_Retina_normal_B_4cRet10370147   
SAGE_Eye_lens_B_UIHI08589836   
SAGE_Liver_cholangiocarcinoma_B_K16031926   
SAGE_Brain_medulloblastoma_B_DL76839225   
SAGE_Retinal_Pigment_Epithelium_normal_B_4MacRPE7726225   
SAGE_White_Blood_Cells_breast_carcinoma_associated_CD45+_AP_IDC73439915   
SAGE_Brain_astrocytoma_grade_III_B_8289993924   
SAGE_Brain_normal_substantia_nigra_B_14177314   
SAGE_Breast_Carcinoma_CD24+_C1_IDC314286604964   
SAGE_Breast_normal_epithelium_CD24+_AP_N154143014   
SAGE_Ovary_adenocarcinoma_B_OVT-64144314   
SAGE_Retina_Retinoblastoma_B_18849024   
SAGE_Brain_Medulloblastoma_CL_425C26264213   
SAGE_Brain_ependymoma_B_11506237313   
SAGE_Brain_ependymoma_B_R102312269023   
SAGE_Brain_medulloblastoma_B_H3066045413   
SAGE_Brain_meningioma_grade_I_B_SF44655464713   
SAGE_Brain_normal_cerebellum_B_15038513   
SAGE_Breast_carcinoma_epithelium_CD44+_AP_PE25234213   
SAGE_Breast_normal_epithelium_CD44+_AP_N25600813   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N15722213   
SAGE_Colon_adenocarcinoma_CL_Caco26068213   
SAGE_Retina_Macula_normal_B_4Mac10141723   
SAGE_Retina_Pigment_epithelium_normal_B_15366613   
SAGE_White_Blood_Cells_lung_macrophage_normal_AP_L15187213   
SAGE_Bone_marrow_normal_AP_CD34+/CD38-/lin-8639112   
SAGE_Brain_Medulloblastoma_CL_425Otx2siRNA9729112   
SAGE_Brain_ependymoma_B_R5127537912   
SAGE_Brain_medulloblastoma_B_98-05-P0408925812   
SAGE_Breast_Normal_Epithelium_CD44+_N6_N481048765132   
SAGE_Breast_normal_epithelium_CD44+_AP_N58046412   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Normal_Oxygen7928412   
SAGE_Skin_Melanoma_B_hs02733881770562   
SAGE_Brain_astrocytoma_grade_III_B_R92710734411   
SAGE_Brain_astrocytoma_grade_II_B_H12711448911   
SAGE_Brain_glioblastoma_B_R2010105311   
SAGE_Placenta_hydatidiform_mole_B_110167711   
SAGE_Bone_Marrow_Cancer_FS_hs04054900037110   
SAGE_Brain_fetal_normal_B_S130554610   
SAGE_Breast_Carcinoma_EPCR+_C6_IDC314208755150   
SAGE_Breast_Carcinoma_SSEA4+_C7_IDC40338124060   
SAGE_Peripheral_Blood_Cancer_B_hs0430639970520   
SAGE_Testis_Embryonal_Carcinoma_CL_hs0212637016150   
SAGE_Testis_Embryonal_Carcinoma_CL_hs02135935490150