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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


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Code
SAGE_Kidney_embryonic_CL_293+beta-catenin23519217   
SAGE_Fibroblasts_CL_postcrisis2183319   
SAGE_Placenta_hydatidiform_mole_B_110167759   
SAGE_Breast_carcinoma_B_95-2593936415   
SAGE_Embryonic_stem_cell_HES3_normal_p16_CL_SHE1020535365   
SAGE_Brain_medulloblastoma_B_98-04-P4944306814   
SAGE_Brain_medulloblastoma_CL_H3414392014   
SAGE_Breast_carcinoma_CL_MDA435C4727014   
SAGE_Liver_cholangiocarcinoma_B_K2D4685314   
SAGE_Ovary_normal_CL_IOSE29EC-114715914   
SAGE_Skin_melanoma_B_DB24133814   
SAGE_Brain_ependymoma_B_11506237313   
SAGE_Brain_glioblastoma_B_pooled5642813   
SAGE_Brain_medulloblastoma_B_H13225949813   
SAGE_Brain_medulloblastoma_B_H4845746913   
SAGE_Brain_medulloblastoma_CL_4-HCR6659913   
SAGE_Brain_meningioma_grade_I_B_SF44655464713   
SAGE_Breast_carcinoma_B_BWHT18_DCIS5070113   
SAGE_Breast_carcinoma_B_DCIS-46060513   
SAGE_Breast_carcinoma_B_IDC-56045113   
SAGE_Breast_carcinoma_CL_MCF7estradiol_10H6072513   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS-26616813   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_IDC285795613   
SAGE_Breast_fibroadenoma_MD5568813   
SAGE_Breast_normal_myoepithelium_CL_HME505551613   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGP010831923   
SAGE_Colon_adenocarcinoma_CL_Caco26068213   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES240143273   
SAGE_Prostate_adenocarcinoma_MD_PR3176495113   
SAGE_Prostate_carcinoma_CL_LNCaP_no-DHT6216013   
SAGE_Retina_macula_normal_B_HMAC210241723   
SAGE_Stomach_carcinoma_B_G1896307513   
SAGE_Thyroid_follicular_carcinoma_B_TT00412466423   
SAGE_Universal_reference_human_RNA_CL5172913   
SAGE_White_Blood_Cells_monocyte_depleted_mononuclear_cells_normal_AP_P15163413   
SAGE_Bone_marrow_normal_AP_CD34+/CD38+/lin+8159512   
SAGE_Brain_Medulloblastoma_CL_UW228-V28082712   
SAGE_Brain_ependymoma_B_H5806861412   
SAGE_Brain_glioblastoma_B_H11106898612   
SAGE_Brain_glioblastoma_B_H1425C8899012   
SAGE_Brain_glioblastoma_B_R709909912   
SAGE_Brain_glioblastoma_hypoxia_CL_H2477176512   
SAGE_Brain_medulloblastoma_B_98-09-P5588598412   
SAGE_Brain_medulloblastoma_B_DL58367112   
SAGE_Brain_medulloblastoma_B_H2757231812   
SAGE_Brain_medulloblastoma_B_H8766740412   
SAGE_Breast_carcinoma_B_95-3476707012   
SAGE_Breast_carcinoma_B_IDC-36889112   
SAGE_Breast_carcinoma_epithelium_X_MUC1+_AP7514712   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N57617312   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Anoxia7905312   
SAGE_Colon_carcinoma_CL_Hct116_wildtype_p53_Normal_Oxygen8039812   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES115173522   
SAGE_Eye_Retinoblastoma_B_hs0389124342321752   
SAGE_Lung_adenocarcinoma_MD_L108688712   
SAGE_Lymph_Node_Lymphoma_B_17200812   
SAGE_Peripheral_Blood_Cancer_B_hs04295756848832   
SAGE_Peripheral_Blood_Cancer_B_hs04306399705762   
SAGE_Placenta_first_trimester_normal_B_18926512   
SAGE_Retina_Retinoblastoma_B_18849012   
SAGE_Retinal_Pigment_Epithelium_normal_B_4MacRPE7726212   
SAGE_Skin_Melanoma_B_hs02743895211402   
SAGE_Stomach_adenocarcinoma_MD_HG79371412   
SAGE_Stomach_normal_MD_14S7335312   
SAGE_Bladder_Cancer_B_hs02645833968441   
SAGE_Brain_astrocytoma_grade_III_B_H97010698211   
SAGE_Brain_astrocytoma_grade_III_B_R14011873311   
SAGE_Brain_astrocytoma_grade_II_B_H12711448911   
SAGE_Brain_astrocytoma_grade_II_B_H35910576411   
SAGE_Brain_astrocytoma_grade_II_B_H50112830911   
SAGE_Embryonic_stem_cell_H13_normal_p22_CL_SHE1522110121   
SAGE_Embryonic_stem_cell_H1_normal_p31_CL_SHE1727620321   
SAGE_Retina_Peripheral_normal_B_4Peri12669111   
SAGE_Retina_normal_B_4cRet10370111   
SAGE_Skin_Cancer_B_hs02795703298451   
SAGE_Skin_Cancer_B_hs02843892507211   
SAGE_Skin_Melanoma_B_hs02733881770341   
SAGE_Skin_Normal_B_hs02724397550331   
SAGE_Skin_Normal_B_hs02816517089341   
SAGE_Thyroid_follicular_adenoma_B_TT00510157811   
SAGE_Thyroid_normal_B_00111593811   
SAGE_Vein_normal_B_hs02376135688581   
SAGE_Bladder_Cancer_B_hs02406216426180   
SAGE_Bladder_Cancer_B_hs0241333580130   
SAGE_Bladder_Cancer_B_hs02654640198200   
SAGE_Bladder_Cancer_B_hs0266424461290   
SAGE_Bone_Marrow_Cancer_FS_hs0405490003720   
SAGE_Brain_fetal_normal_B_S130554610   
SAGE_Breast_Carcinoma_CD24+_C1_IDC314286604100   
SAGE_Breast_Carcinoma_CD24+_C2_IDC34472096060   
SAGE_Breast_Carcinoma_CD24+_C3_IDC38411741030   
SAGE_Breast_Carcinoma_CD24+_C4_IDC40357091020   
SAGE_Breast_Carcinoma_EPCR+_C5_IDC27379656820   
SAGE_Breast_Carcinoma_EPCR+_C6_IDC314208755120   
SAGE_Breast_Carcinoma_SSEA4+_C7_IDC40338124040   
SAGE_Breast_Normal_Epithelium_CD24+_N1_N33964688050   
SAGE_Breast_Normal_Epithelium_CD24+_N2_N351358422330   
SAGE_Breast_Normal_Epithelium_CD24+_N3_N47303600230   
SAGE_Breast_Normal_Epithelium_CD24+_N4_N48180227440   
SAGE_Breast_Normal_Epithelium_CD44+_N5_N47189093860   
SAGE_Breast_Normal_Epithelium_CD44+_N6_N48104876510   
SAGE_Embryo_Pre-Cancer_B_hs03246893016300   
SAGE_Embryonic_stem_cell_BG01_normal_p20_CL_SHE1920166810   
SAGE_Embryonic_stem_cell_H7_normal_p33_CL_SHE1327246510   
SAGE_Embryonic_stem_cell_HSF6_normal_p50_CL_SHES922448810   
SAGE_Embryonic_stem_cell_normal_CL_hs02383636083120   
SAGE_Foreskin_normal_B_hs03053940350190   
SAGE_Lymph_node_Lymphoma_B_hs01964791481120   
SAGE_Lymph_node_Lymphoma_B_hs02045178993220   
SAGE_Skin_Cancer_B_hs02803618498100   
SAGE_Skin_Cancer_B_hs02833692239130   
SAGE_Skin_Melanoma_B_hs02754128221150   
SAGE_Skin_Melanoma_B_hs02765631800150   
SAGE_Skin_Normal_B_hs02715807686280   
SAGE_Skin_Normal_B_hs02775269789150   
SAGE_Skin_Normal_B_hs02783042221110   
SAGE_Skin_Normal_B_hs02824411636120   
SAGE_Testis_Embryonal_Carcinoma_CL_hs0212637016190   
SAGE_Testis_Embryonal_Carcinoma_CL_hs02135935490120   
SAGE_Urothelium_normal_B_hs02393114307110   
SAGE_Uterus_Normal_B_hs0194645262390   
SAGE_Uterus_normal_B_hs01953718463140   
SAGE_Vein_normal_B_hs02306755622250