Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
SAGE Genie
  • Human SAGE Genie Tools
  • Downloads
  • Digital Karyotyping
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Digital Northern Results

Search query: GATAGTATAG

Color Code                              
Tags per 200,000 <2 <4 <8 <16 <32 <64 <128 <256 <512 >512

LibraryTotal Tags
in Library
Tag CountsTags per
200,000
Color
Code
SAGE_Embryonic_stem_cell_normal_CL_hs0238363608325213   
SAGE_Brain_ependymoma_B_139456314310   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_IDC2639361210   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N157222310   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGD0109862610   
SAGE_Brain_normal_cerebellum_B_BB5424050029   
SAGE_Breast_carcinoma_CL_MDA435H244663128   
SAGE_Kidney_embryonic_CL_293+beta-catenin2351918   
SAGE_Ovary_normal_CL_IOSE29EC-114715928   
SAGE_Brain_astrocytoma_grade_III_B_H97010698247   
SAGE_Brain_astrocytoma_grade_III_B_R92710734447   
SAGE_Brain_glioblastoma_B_H83310060047   
SAGE_Breast_carcinoma_epithelium_CD44+_AP_PE25234227   
SAGE_Eye_Retinoblastoma_B_hs0389124342324957   
SAGE_Peritoneum_normal_B_135352727   
SAGE_Brain_astrocytoma_grade_III_B_8289993936   
SAGE_Brain_glioblastoma_B_R709909936   
SAGE_Brain_medulloblastoma_B_H13225949826   
SAGE_Breast_Carcinoma_CD24+_C2_IDC3447209601436   
SAGE_Ovary_adenocarcinoma_B_OVT-83198716   
SAGE_Pancreas_carcinoma_CL_PL452955716   
SAGE_Peritoneum_mesothelioma_B_123252916   
SAGE_Placenta_normal_B_111808346   
SAGE_Vein_normal_B_hs023067556222266   
SAGE_Bladder_Cancer_B_hs02413335801995   
SAGE_Brain_astrocytoma_grade_II_B_H51610811635   
SAGE_Brain_glioblastoma_CL_stem_cells10841435   
SAGE_Brain_medulloblastoma_B_12733861415   
SAGE_Brain_medulloblastoma_B_C6097461225   
SAGE_Brain_normal_leptomeninges_B_AL27247325   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N57617325   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES115173545   
SAGE_Pancreas_adenocarcinoma_CL_CAPAN13767415   
SAGE_Placenta_hydatidiform_mole_B_110167735   
SAGE_Prostate_carcinoma_CL_PC3_Mock3881915   
SAGE_Retina_Macula_normal_B_4Mac10141735   
SAGE_Retinal_Pigment_Epithelium_normal_B_4MacRPE7726225   
SAGE_Thyroid_follicular_adenoma_B_TT00510157835   
SAGE_Bladder_Cancer_B_hs024062164261424   
SAGE_Bone_marrow_normal_AP_CD34+/CD38-/lin-8639124   
SAGE_Brain_glioblastoma_B_H13714933814   
SAGE_Brain_glioblastoma_B_H1425C8899024   
SAGE_Brain_meningioma_grade_II_B_SF21764871114   
SAGE_Breast_carcinoma_CL_MDA435C4727014   
SAGE_Breast_carcinoma_CL_MDA435H484032314   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGX08843924   
SAGE_Kidney_embryonic_CL_293-control4195514   
SAGE_Kidney_normal_B_14099314   
SAGE_Lung_normal_B_18870824   
SAGE_Peripheral_Blood_Cancer_B_hs042957568481274   
SAGE_Prostate_carcinoma_CL_LNCaP-C4002914   
SAGE_Prostate_carcinoma_CL_LNCaP-T4354214   
SAGE_Rheumatoid_arthritis_synovial_fibroblast_CS4247214   
SAGE_Skin_Cancer_B_hs02833692239884   
SAGE_Skin_Melanoma_B_hs02733881770844   
SAGE_Urothelium_normal_B_hs02393114307714   
SAGE_Uterus_normal_B_hs01953718463914   
SAGE_White_Blood_Cells_monocytes_normal_AP_A29878624   
SAGE_Bladder_Cancer_B_hs02654640198773   
SAGE_Brain_astrocytoma_grade_III_B_40710831223   
SAGE_Brain_astrocytoma_grade_II_B_H35910576423   
SAGE_Brain_astrocytoma_grade_II_B_H50112830923   
SAGE_Brain_ependymoma_B_R102312269023   
SAGE_Brain_ependymoma_B_R62812043123   
SAGE_Brain_glioblastoma_B_H135312480523   
SAGE_Brain_medulloblastoma_B_H4845746913   
SAGE_Brain_meningioma_grade_I_B_SF44655464713   
SAGE_Breast_Carcinoma_CD24+_C4_IDC403570910593   
SAGE_Breast_Carcinoma_SSEA4+_C7_IDC403381240563   
SAGE_Breast_carcinoma_B_IDC-46409513   
SAGE_Breast_carcinoma_CL_MCF7control_0h5987713   
SAGE_Breast_carcinoma_CL_MCF7estradiol_3h6016213   
SAGE_Breast_carcinoma_epithelium_PROCR+_AP_IDC295408013   
SAGE_Breast_metastatic_carcinoma_B_LN26034313   
SAGE_Breast_normal_epithelium_BEREP4+_AP_N25051213   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N156399413   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGP010831923   
SAGE_Colon_adenocarcinoma_CL_Caco26068213   
SAGE_Foreskin_normal_B_hs03053940350783   
SAGE_Muscle_normal_B_old5388913   
SAGE_Peripheral_Blood_Cancer_B_hs043063997051003   
SAGE_Retina_Peripheral_normal_B_210531223   
SAGE_Retina_Peripheral_normal_B_4Peri12669123   
SAGE_Retina_macula_normal_B_HMAC210241723   
SAGE_Skin_Cancer_B_hs02803618498693   
SAGE_Skin_Melanoma_B_hs02743895211633   
SAGE_Skin_Normal_B_hs02783042221553   
SAGE_Spinal_cord_normal_B_15478513   
SAGE_Stomach_adenocarcinoma_MD_HS295883113   
SAGE_Stomach_carcinoma_B_xenograph_X435162013   
SAGE_Testis_Embryonal_Carcinoma_CL_hs021263701611113   
SAGE_Testis_Embryonal_Carcinoma_CL_hs021359354901123   
SAGE_Testis_Embyronal_Carcinoma_B_16635213   
SAGE_Universal_reference_human_RNA_CL5172913   
SAGE_Uterus_Normal_B_hs019464526231223   
SAGE_White_Blood_Cells_monocyte_depleted_mononuclear_cells_normal_AP_A15379513   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P25029713   
SAGE_Bladder_Cancer_B_hs02664244612562   
SAGE_Brain_Medulloblastoma_CL_UW228-V28082712   
SAGE_Brain_astrocytoma_grade_I_B_H10437592212   
SAGE_Brain_glioblastoma_CL_H54+LacZ6690812   
SAGE_Brain_medulloblastoma_B_97-05-P3127429512   
SAGE_Breast_Carcinoma_CD24+_C1_IDC314286604592   
SAGE_Breast_Carcinoma_EPCR+_C5_IDC273796568402   
SAGE_Breast_Carcinoma_EPCR+_C6_IDC314208755442   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC87396712   
SAGE_Breast_carcinoma_associated_stroma_B_IDC76802412   
SAGE_Breast_carcinoma_epithelium_BerEP4+AP_IDC77341012   
SAGE_Breast_normal_epithelium_CD24+_AP_N57646912   
SAGE_Breast_normal_epithelium_MUC1+_AP_N57622712   
SAGE_Embryo_Pre-Cancer_B_hs03246893016962   
SAGE_Embryonic_stem_cell_H1_normal_p54_CL_SHE1621821432   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES240143262   
SAGE_Embryonic_stem_cell_HES4_normal_p36_CL_SHE1120923232   
SAGE_Esophagus_Dysplasia_B_LGD017490412   
SAGE_Heart_normal_B_18306312   
SAGE_Lymph_Node_normal_B_19942612   
SAGE_Ovary_endometriosis_CL_E127609712   
SAGE_Prostate_normal_epithelium_CS_confluent7189712   
SAGE_Retina_Retinoblastoma_B_18849012   
SAGE_Retinal_Pigment_Epithelium_normal_B_4PeriRPE9019912   
SAGE_Skin_Melanoma_B_hs02754128221592   
SAGE_Skin_Normal_B_hs02715807686852   
SAGE_Skin_Normal_B_hs02724397550492   
SAGE_Skin_Normal_B_hs02775269789732   
SAGE_Skin_Normal_B_hs02816517089812   
SAGE_Stomach_normal_MD_14S7335312   
SAGE_Vascular_endothelium_hemangioma_B_1467568012   
SAGE_Vein_normal_B_hs02376135688822   
SAGE_Bladder_Cancer_B_hs02645833968531   
SAGE_Bone_Marrow_Normal_FS_hs04044842547371   
SAGE_Brain_astrocytoma_grade_III_B_34310015811   
SAGE_Brain_astrocytoma_grade_III_B_43910782411   
SAGE_Brain_astrocytoma_grade_III_B_58410300811   
SAGE_Brain_astrocytoma_grade_III_B_R14011873311   
SAGE_Brain_astrocytoma_grade_II_B_H12711448911   
SAGE_Brain_astrocytoma_grade_II_B_H38810628511   
SAGE_Brain_fetal_normal_B_S130554631   
SAGE_Brain_glioblastoma_B_R2010105311   
SAGE_Brain_glioblastoma_CL_4d11521211   
SAGE_Breast_Carcinoma_CD24+_C3_IDC384117410271   
SAGE_Breast_Normal_Epithelium_CD44+_N7_N5811007864801   
SAGE_Embryonic_stem_cell_BG01_normal_p20_CL_SHE1920166821   
SAGE_Embryonic_stem_cell_H13_normal_p22_CL_SHE1522110121   
SAGE_Embryonic_stem_cell_H1_normal_p31_CL_SHE1727620321   
SAGE_Lymph_node_Lymphoma_B_hs02045178993321   
SAGE_Skin_Cancer_B_hs02843892507371   
SAGE_Thyroid_follicular_carcinoma_B_TT00412466411   
SAGE_White_Blood_Cells_monocytes_normal_AP_C110165611   
SAGE_Breast_Normal_Epithelium_CD24+_N1_N33964688040   
SAGE_Breast_Normal_Epithelium_CD24+_N2_N351358422330   
SAGE_Breast_Normal_Epithelium_CD24+_N3_N47303600240   
SAGE_Breast_Normal_Epithelium_CD24+_N4_N48180227450   
SAGE_Breast_Normal_Epithelium_CD44+_N5_N47189093820   
SAGE_Breast_Normal_Epithelium_CD44+_N6_N48104876510   
SAGE_Embryonic_stem_cell_H14_normal_p22_CL_SHE1421217010   
SAGE_Embryonic_stem_cell_H7_normal_p33_CL_SHE1327246510   
SAGE_Lymph_node_Lymphoma_B_hs01964791481200   
SAGE_Skin_Cancer_B_hs02795703298120   
SAGE_Skin_Melanoma_B_hs02765631800160   
SAGE_Skin_Normal_B_hs02824411636180