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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Digital Northern Results

Search query: GAATCCTGCA

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Tags per 200,000 <2 <4 <8 <16 <32 <64 <128 <256 <512 >512

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Code
SAGE_Prostate_adenocarcinoma_CL_LNCaP22344326   
SAGE_Skin_Melanoma_B_hs0276563180062122   
SAGE_Brain_meningioma_grade_I_B_SF446554647518   
SAGE_Brain_ependymoblastoma_B_81933975317   
SAGE_Brain_glioblastoma_CS_TA246678417   
SAGE_Breast_normal_FS_NER34565317   
SAGE_Breast_carcinoma_metastasis_B_249794416   
SAGE_Kidney_Glomeruli_Normal_B_bjballer148905416   
SAGE_Prostate_normal_epithelium_CS_senescent71717616   
SAGE_Brain_astrocytoma_grade_II_B_H127114489915   
SAGE_Brain_Medulloblastoma_CL_UW228-V280827614   
SAGE_Breast_carcinoma_CL_ZR75_1_tamoxifen40052314   
SAGE_Breast_carcinoma_associated_stroma_B_IDC768024514   
SAGE_Brain_glioblastoma_B_GBM106259762413   
SAGE_Brain_glioblastoma_control_CL_H24760428413   
SAGE_Brain_medulloblastoma_B_98-09-P55885984613   
SAGE_Cartilage_chondrosarcoma_grade_2_CL_UIFU075019513   
SAGE_Brain_Medulloblastoma_CL_425C262642412   
SAGE_Brain_astrocytoma_grade_III_B_407108312712   
SAGE_Breast_carcinoma_CL_MDA435C47270312   
SAGE_Breast_carcinoma_CL_MDA435H2446631312   
SAGE_Breast_carcinoma_associated_myoepithelium_CD10+_AP_DCIS681452512   
SAGE_Cartilage_chondrosarcoma_grade_1_CL_UIIC033081212   
SAGE_Ovary_carcinoma_CL_ES2-131159212   
SAGE_Pancreas_adenocarcinoma_B_96-625233213212   
SAGE_Pancreas_normal_CS_H12632223212   
SAGE_Brain_glioblastoma_B_H1425C88990511   
SAGE_Brain_medulloblastoma_B_96-04-P01952645311   
SAGE_Breast_Carcinoma_CD24+_C3_IDC38411741023411   
SAGE_GallBladder_Adenocarcinoma_B_HAIIb66988411   
SAGE_Lung_normal_B_188708511   
SAGE_Retinal_Pigment_Epithelium_normal_B_4PeriRPE90199511   
SAGE_Stomach_carcinoma_B_xenograph_X4351620311   
SAGE_Universal_reference_human_RNA_CL51729311   
SAGE_Brain_glioblastoma_B_pooled56428310   
SAGE_Brain_glioblastoma_CL_H39255990310   
SAGE_Brain_glioblastoma_CL_H54+EGFRvIII56982310   
SAGE_Breast_carcinoma_B_95-25939364210   
SAGE_Vascular_normal_CS_VEGF+57316310   
SAGE_Brain_astrocytoma_grade_II_B_H50112830969   
SAGE_Brain_normal_substantia_nigra_B_14177329   
SAGE_Breast_carcinoma_MD_DCIS4078329   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIFK08594449   
SAGE_Fibroblasts_CL_postcrisis2183319   
SAGE_GallBladder_Normal_B_HN8570649   
SAGE_Prostate_adenocarcinoma_MD_PR3176495139   
SAGE_Rheumatoid_arthritis_synovial_fibroblast_CS4247229   
SAGE_Skin_Cancer_B_hs027957032982809   
SAGE_Thyroid_follicular_carcinoma_B_TT00412466469   
SAGE_Uterus_endometrium_normal_CS_DI12199119   
SAGE_Brain_ependymoma_B_R102312269058   
SAGE_Brain_glioblastoma_B_R709909948   
SAGE_Breast_carcinoma_B_95-3476707038   
SAGE_Breast_metastatic_carcinoma_B_LN14508728   
SAGE_Thyroid_normal_B_00111593858   
SAGE_Brain_astrocytoma_grade_III_B_R92710734447   
SAGE_Brain_astrocytoma_grade_II_B_H51610811647   
SAGE_Brain_ependymoma_B_13945631427   
SAGE_Brain_ependymoma_B_R5127537937   
SAGE_Brain_medulloblastoma_B_H9728537637   
SAGE_Breast_carcinoma_associated_myoepithelium_CD10+_AP_DCIS75199327   
SAGE_Breast_carcinoma_epithelium_PROCR+_AP_IDC295408027   
SAGE_Breast_fibroadenoma_MD5568827   
SAGE_Breast_normal_epithelium_CD44+_AP_N25600827   
SAGE_Breast_normal_stroma_B_IDC85048527   
SAGE_GallBladder_Adenocarcinoma_B_NAM017854837   
SAGE_Ovary_adenocarcinoma_B_OVT-75351427   
SAGE_Retina_macula_normal_B_HMAC210241747   
SAGE_Spinal_cord_normal_B_15478527   
SAGE_Stomach_normal_B_antrum2665317   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P25029727   
SAGE_Brain_astrocytoma_grade_III_B_R14011873346   
SAGE_Breast_carcinoma_B_IDC-56045126   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC76509126   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC96353926   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC86652026   
SAGE_Breast_metastatic_carcinoma_B_LN26034326   
SAGE_Eye_lens_B_UIHI08589836   
SAGE_Lymph_Node_normal_B_19942636   
SAGE_Placenta_first_trimester_normal_B_18926536   
SAGE_Prostate_carcinoma_B_pool26603426   
SAGE_Prostate_carcinoma_CL_A+3029816   
SAGE_Skin_Melanoma_B_hs027438952111326   
SAGE_Stomach_adenocarcinoma_B_G2346492526   
SAGE_Vascular_endothelium_breast_carcinoma_associated_P1H12+_AP_DCIS66531426   
SAGE_Brain_astrocytoma_grade_III_B_34310015835   
SAGE_Brain_astrocytoma_grade_III_B_H97010698235   
SAGE_Brain_astrocytoma_grade_II_B_H35910576435   
SAGE_Brain_astrocytoma_grade_I_B_H10437592225   
SAGE_Brain_glioblastoma_B_R2010105335   
SAGE_Brain_glioblastoma_CL_28d11062435   
SAGE_Brain_glioblastoma_hypoxia_CL_H2477176525   
SAGE_Brain_medulloblastoma_B_97-05-P0156997125   
SAGE_Brain_meningioma_grade_I_B_SF42716925325   
SAGE_Brain_normal_peds_cortex_B_H15717755425   
SAGE_Breast_carcinoma_MD_LCIS6783425   
SAGE_Breast_normal_epithelium_CD24+_AP_N57646925   
SAGE_Breast_normal_epithelium_MUC1+_AP_N157170425   
SAGE_Breast_normal_myoepithelium_CD10+_AP_IDC76900625   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIEK03774715   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGD010986235   
SAGE_Esophagus_Dysplasia_B_LGD017490425   
SAGE_Pancreas_adenocarcinoma_CL_CAPAN13767415   
SAGE_Prostate_carcinoma_CL_PC3_Mock3881915   
SAGE_Retina_Peripheral_normal_B_210531235   
SAGE_Retinal_Pigment_Epithelium_normal_B_4MacRPE7726225   
SAGE_Skin_Melanoma_B_hs027541282211125   
SAGE_Skin_normal_B_NS3661515   
SAGE_Thyroid_follicular_adenoma_B_TT00510157835   
SAGE_Bladder_Cancer_B_hs02413335801734   
SAGE_Brain_Medulloblastoma_CL_UW228-N9493724   
SAGE_Brain_ependymoma_B_R5108407324   
SAGE_Brain_medulloblastoma_CL_H3414392014   
SAGE_Brain_medulloblastoma_CL_mhh-14785814   
SAGE_Brain_meningioma_grade_II_B_SF21764871114   
SAGE_Breast_Normal_Epithelium_CD44+_N6_N481048765244   
SAGE_Breast_carcinoma_B_DCIS-54309814   
SAGE_Breast_carcinoma_CL_MDA435H484032314   
SAGE_Breast_normal_epithelium_BEREP4+_AP_N14872914   
SAGE_Embryonic_stem_cell_H14_normal_p22_CL_SHE1421217054   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES240143294   
SAGE_Lung_normal_CL_L154222614   
SAGE_Ovary_normal_CS_HOSE_44772814   
SAGE_Retina_Retinoblastoma_B_18849024   
SAGE_Skin_Melanoma_B_hs02733881770974   
SAGE_Stomach_adenocarcinoma_MD_G3294680214   
SAGE_Testis_Embryonal_Carcinoma_CL_hs021359354901244   
SAGE_Brain_astrocytoma_grade_III_B_43910782423   
SAGE_Brain_astrocytoma_grade_III_B_58410300823   
SAGE_Brain_astrocytoma_grade_III_B_H105510988623   
SAGE_Brain_astrocytoma_grade_II_B_H38810628523   
SAGE_Brain_ependymoma_B_R5825218913   
SAGE_Brain_glioblastoma_B_H135312480523   
SAGE_Brain_glioblastoma_B_H83310060023   
SAGE_Brain_glioblastoma_CL_stem_cells10841423   
SAGE_Brain_medulloblastoma_B_H13225949813   
SAGE_Brain_meningioma_grade_III_B_SF23665978613   
SAGE_Brain_normal_cerebellum_B_15038513   
SAGE_Breast_Carcinoma_SSEA4+_C7_IDC403381240603   
SAGE_Breast_Normal_Epithelium_CD44+_N7_N58110078641843   
SAGE_Breast_carcinoma_CL_MCF7control_0h5987713   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS-26616813   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC96593513   
SAGE_Breast_normal_B_gestational hyperplasia16170413   
SAGE_Breast_normal_epithelium_BEREP4+_AP_N25051213   
SAGE_Breast_normal_organoid_B5818113   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGP010831923   
SAGE_Colon_adenocarcinoma_CL_SW8376114813   
SAGE_Liver_cholangiocarcinoma_B_K16031913   
SAGE_Liver_normal_B_16630813   
SAGE_Ovary_cystadenoma_CL_ML10-105514413   
SAGE_Placenta_hydatidiform_mole_B_110167723   
SAGE_Placenta_normal_B_111808323   
SAGE_Prostate_carcinoma_CL_LNCaP6025013   
SAGE_Prostate_normal_MD_PR3175927713   
SAGE_Retina_Peripheral_normal_B_15966113   
SAGE_Skin_Normal_B_hs02724397550663   
SAGE_Testis_Embyronal_Carcinoma_B_16635213   
SAGE_Uterus_normal_B_hs01953718463633   
SAGE_Vascular_endothelium_normal_breast_associated_P1H12+_AP_15702313   
SAGE_Vascular_normal_CS_control5164213   
SAGE_White_Blood_Cells_breast_carcinoma_associated_CD45+_AP_DCIS66617613   
SAGE_Bladder_Cancer_B_hs02406216426632   
SAGE_Bladder_Cancer_B_hs02645833968712   
SAGE_Bone_marrow_normal_AP_CD34+/CD38+/lin+8159512   
SAGE_Bone_marrow_normal_AP_CD34+/CD38-/lin-8639112   
SAGE_Brain_Medulloblastoma_CL_425Otx2siRNA9729112   
SAGE_Brain_glioblastoma_B_H11106898612   
SAGE_Brain_glioblastoma_CL_H54+LacZ6690812   
SAGE_Brain_medulloblastoma_B_98-05-P0408925812   
SAGE_Brain_normal_cortex_B_BB5429423312   
SAGE_Breast_Carcinoma_CD24+_C4_IDC403570910422   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS67285712   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS78918412   
SAGE_Breast_normal_stroma_AP_17915212   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGX08843912   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Anoxia7905312   
SAGE_Embryonic_stem_cell_H7_normal_p33_CL_SHE1327246542   
SAGE_GallBladder_Adenocarcinoma_B_C018138012   
SAGE_Heart_normal_B_18306312   
SAGE_Lung_adenocarcinoma_MD_L108688712   
SAGE_Lymph_Node_Lymphoma_B_17200812   
SAGE_Lymph_node_Lymphoma_B_hs02045178993772   
SAGE_Ovary_endometriosis_CL_E127609712   
SAGE_Peripheral_Blood_Cancer_B_hs04295756848782   
SAGE_Peripheral_Blood_Cancer_B_hs04306399705792   
SAGE_Prostate_normal_epithelium_CS_confluent7189712   
SAGE_Stomach_adenocarcinoma_MD_HG79371412   
SAGE_Stomach_normal_MD_14S7335312   
SAGE_Testis_Embryonal_Carcinoma_CL_hs02126370161732   
SAGE_Uterus_Normal_B_hs01946452623872   
SAGE_Vascular_endothelium_hemangioma_B_1467568012   
SAGE_Vein_normal_B_hs02376135688752   
SAGE_Bladder_Cancer_B_hs02654640198261   
SAGE_Bladder_Cancer_B_hs02664244612411   
SAGE_Brain_astrocytoma_grade_II_B_H53010243911   
SAGE_Brain_ependymoma_B_R62812043111   
SAGE_Breast_Carcinoma_CD24+_C2_IDC344720960411   
SAGE_Embryo_Pre-Cancer_B_hs03246893016681   
SAGE_Embryonic_stem_cell_BG01_normal_p20_CL_SHE1920166821   
SAGE_Embryonic_stem_cell_H1_normal_p31_CL_SHE1727620321   
SAGE_Embryonic_stem_cell_HSF6_normal_p50_CL_SHES922448821   
SAGE_Eye_Retinoblastoma_B_hs038912434232801   
SAGE_Foreskin_normal_B_hs03053940350221   
SAGE_Retina_normal_B_4cRet10370111   
SAGE_Skin_Cancer_B_hs02803618498271   
SAGE_Skin_Normal_B_hs02715807686561   
SAGE_Skin_Normal_B_hs02775269789441   
SAGE_Skin_Normal_B_hs02783042221221   
SAGE_Skin_Normal_B_hs02816517089621   
SAGE_Urothelium_normal_B_hs02393114307171   
SAGE_Vein_normal_B_hs02306755622611   
SAGE_Bone_Marrow_Cancer_FS_hs04054900037160   
SAGE_Breast_Carcinoma_CD24+_C1_IDC314286604120   
SAGE_Breast_Carcinoma_EPCR+_C5_IDC273796568140   
SAGE_Breast_Carcinoma_EPCR+_C6_IDC314208755170   
SAGE_Breast_Normal_Epithelium_CD24+_N1_N33964688050   
SAGE_Breast_Normal_Epithelium_CD24+_N2_N3513584223100   
SAGE_Breast_Normal_Epithelium_CD24+_N3_N47303600280   
SAGE_Breast_Normal_Epithelium_CD24+_N4_N48180227490   
SAGE_Breast_Normal_Epithelium_CD44+_N5_N47189093870   
SAGE_Embryonic_stem_cell_H1_normal_p54_CL_SHE1621821410   
SAGE_Embryonic_stem_cell_HES3_normal_p16_CL_SHE1020535310   
SAGE_Embryonic_stem_cell_normal_CL_hs02383636083180   
SAGE_Lymph_node_Lymphoma_B_hs01964791481150   
SAGE_Skin_Cancer_B_hs02833692239140   
SAGE_Skin_Cancer_B_hs02843892507180   
SAGE_Skin_Normal_B_hs02824411636210