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Cancer Genome Characterization Initiative

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SAGE_Breast_Carcinoma_CD24+_C2_IDC34472096086736   
SAGE_Liver_normal_B_1663081133   
SAGE_Prostate_carcinoma_CL_A+30298533   
SAGE_Ovary_adenocarcinoma_B_OVT-831987531   
SAGE_Breast_carcinoma_CL_ZR75_1_untreated32303530   
SAGE_Ovary_carcinoma_CL_A278021369328   
SAGE_Breast_Carcinoma_CD24+_C3_IDC38411741056727   
SAGE_Breast_carcinoma_CL_ZR75_1_estrogen38797525   
SAGE_Bone_marrow_normal_AP_CD34+/CD38+/lin+81595922   
SAGE_Brain_ependymoma_B_R58252189622   
SAGE_Brain_glioblastoma_B_R3361023221019   
SAGE_Colon_adenocarcinoma_CL_Caco260682619   
SAGE_Ovary_carcinoma_CL_ES2-131159319   
SAGE_Prostate_carcinoma_CL_LNCaP_no-DHT62160619   
SAGE_Bone_marrow_normal_AP_CD34+/CD38-/lin-86391818   
SAGE_Brain_ependymoma_B_R51275379718   
SAGE_Lung_normal_CL_L1542226418   
SAGE_Prostate_carcinoma_CL_LNCaP-T43542418   
SAGE_Stomach_adenocarcinoma_B_G23464925618   
SAGE_Uterus_endometrium_normal_CS_DI121991218   
SAGE_Colon_carcinoma_CL_Hct116_wildtype_p53_Normal_Oxygen80398717   
SAGE_Kidney_carcinoma_B_D2100281917   
SAGE_Brain_glioblastoma_control_CL_H24760428516   
SAGE_Brain_medulloblastoma_CL_mhh-147858416   
SAGE_Breast_normal_B_gestational hyperplasia161704516   
SAGE_Ovary_normal_CL_IOSE29EC-1147159416   
SAGE_Prostate_carcinoma_CL_LNCaP60250516   
SAGE_Stomach_carcinoma_B_G18963075515   
SAGE_Vascular_normal_CS_control51642415   
SAGE_Brain_glioblastoma_B_pooled56428414   
SAGE_Brain_ependymoma_B_R1023122690813   
SAGE_Brain_glioblastoma_hypoxia_CL_H24771765513   
SAGE_Breast_carcinoma_CL_MCF7control_0h59877413   
SAGE_Breast_metastatic_carcinoma_B_LN260343413   
SAGE_Brain_glioblastoma_CS_TA246678312   
SAGE_Brain_medulloblastoma_CL_D28366316412   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS-266168412   
SAGE_Breast_normal_epithelium_BEREP4+_AP_N148729312   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Anoxia79053512   
SAGE_Colon_normal_B_NC248479312   
SAGE_Peritoneum_mesothelioma_B_1232529212   
SAGE_Prostate_carcinoma_B_pool266034412   
SAGE_Prostate_normal_B_264058412   
SAGE_Brain_ependymoma_B_R45551825311   
SAGE_Breast_Normal_Epithelium_CD44+_N5_N47189093811311   
SAGE_Breast_carcinoma_epithelium_PROCR+_AP_IDC2954080311   
SAGE_Lymph_Node_Lymphoma_B_172008411   
SAGE_Pancreas_adenocarcinoma_B_91-1611333582211   
SAGE_Placenta_first_trimester_normal_B_189265511   
SAGE_White_Blood_Cells_monocyte_depleted_mononuclear_cells_normal_AP_P151634311   
SAGE_Bone_marrow_normal_B_D0136577210   
SAGE_Brain_ependymoma_B_139456314310   
SAGE_Breast_Carcinoma_CD24+_C4_IDC40357091019310   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N157222310   
SAGE_Colon_adenocarcinoma_CL_HCT11655641310   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Normal_Oxygen79284410   
SAGE_Thyroid_normal_B_001115938610   
SAGE_Brain_medulloblastoma_B_DL58367149   
SAGE_Brain_medulloblastoma_CL_H3414392029   
SAGE_Breast_Carcinoma_SSEA4+_C7_IDC4033812401549   
SAGE_Breast_carcinoma_B_DCIS-46060539   
SAGE_Breast_carcinoma_CL_MCF7estradiol_3h6016239   
SAGE_Breast_carcinoma_CL_ZR75_1_tamoxifen4005229   
SAGE_Breast_normal_epithelium_CD44+_AP_N58046449   
SAGE_Fibroblasts_CL_postcrisis2183319   
SAGE_Lung_normal_B_18870849   
SAGE_Ovary_adenocarcinoma_B_OVT-64144329   
SAGE_Testis_Embryonal_Carcinoma_CL_hs021359354902839   
SAGE_Brain_Medulloblastoma_CL_UW228-N9493748   
SAGE_Brain_ependymoma_B_2394665328   
SAGE_Brain_ependymoma_B_H5806861438   
SAGE_Brain_glioblastoma_B_H11106898638   
SAGE_Brain_glioblastoma_B_H135312480558   
SAGE_Brain_glioblastoma_B_H13714933828   
SAGE_Brain_glioblastoma_B_H1425C8899048   
SAGE_Brain_glioblastoma_CL_H54+LacZ6690838   
SAGE_Breast_Normal_Epithelium_CD24+_N3_N4730360021238   
SAGE_Breast_Normal_Epithelium_CD24+_N4_N481802274808   
SAGE_Breast_Normal_Epithelium_CD44+_N7_N58110078644608   
SAGE_Breast_carcinoma_B_95-3476707038   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS67285738   
SAGE_Colon_normal_B_NC14961028   
SAGE_Kidney_Glomeruli_Normal_B_bjballer14890528   
SAGE_Kidney_embryonic_CL_293+beta-catenin2351918   
SAGE_Pancreas_adenocarcinoma_CL_Panc12474918   
SAGE_Stomach_adenocarcinoma_MD_G3294680228   
SAGE_Stomach_normal_MD_13S4590828   
SAGE_Brain_astrocytoma_grade_III_B_H105510988647   
SAGE_Brain_astrocytoma_grade_II_B_H35910576447   
SAGE_Brain_astrocytoma_grade_II_B_H38810628547   
SAGE_Brain_ependymoma_B_R5108407337   
SAGE_Brain_glioblastoma_CL_H54+EGFRvIII5698227   
SAGE_Breast_Carcinoma_EPCR+_C5_IDC2737965681387   
SAGE_Colon_adenocarcinoma_B_Tu1025570027   
SAGE_Colon_adenocarcinoma_CL_RKO5129427   
SAGE_GallBladder_Adenocarcinoma_B_C018138037   
SAGE_Liver_cholangiocarcinoma_CL_K45297327   
SAGE_Skin_Melanoma_B_hs027541282211537   
SAGE_Spinal_cord_normal_B_15478527   
SAGE_White_Blood_Cells_lung_macrophage_normal_AP_L15187227   
SAGE_White_Blood_Cells_monocytes_normal_AP_P25442627   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P25029727   
SAGE_Brain_astrocytoma_grade_III_B_H2729605936   
SAGE_Brain_ependymoma_B_R62812043146   
SAGE_Brain_oligodendroglioma_B_10013244216   
SAGE_Breast_carcinoma_CL_MCF7estradiol_10H6072526   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS78918436   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_IDC285795626   
SAGE_Cartilage_chondrosarcoma_grade_1_CL_UIIC03308116   
SAGE_Embryonic_stem_cell_HES3_normal_p16_CL_SHE1020535376   
SAGE_Lung_adenocarcinoma_MD_L108688736   
SAGE_Lung_normal_CL_L162898316   
SAGE_Pancreas_carcinoma_CL_PL452955716   
SAGE_Pancreas_normal_CS_H1263222316   
SAGE_Prostate_adenocarcinoma_MD_PR3176495126   
SAGE_Skin_Melanoma_B_hs027338817701346   
SAGE_Skin_Melanoma_B_hs027656318001796   
SAGE_Uterus_normal_B_hs019537184631126   
SAGE_White_Blood_Cells_monocytes_normal_AP_A29878636   
SAGE_Bladder_Cancer_B_hs024062164261735   
SAGE_Brain_astrocytoma_grade_III_B_R14011873335   
SAGE_Brain_astrocytoma_grade_I_B_H10437592225   
SAGE_Brain_ependymoblastoma_B_8193397515   
SAGE_Brain_ependymoma_B_R3537382225   
SAGE_Brain_glioblastoma_CL_4d11521235   
SAGE_Brain_medulloblastoma_B_12733861415   
SAGE_Brain_medulloblastoma_B_H2757231825   
SAGE_Breast_carcinoma_B_95-2593936415   
SAGE_Breast_carcinoma_B_IDC-36889125   
SAGE_Breast_carcinoma_epithelium_BerEP4+AP_IDC77341025   
SAGE_Breast_normal_FS_NER3456515   
SAGE_Breast_normal_stroma_AP_17915225   
SAGE_Colon_carcinoma_CL_Hct116_wildtype_p53_Anoxia7901525   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES115173545   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES2401432115   
SAGE_GallBladder_Adenocarcinoma_B_HAIIb6698825   
SAGE_Lung_adenocarcinoma_B_13625615   
SAGE_Pancreas_adenocarcinoma_CL_CAPAN13767415   
SAGE_Placenta_hydatidiform_mole_B_110167735   
SAGE_Prostate_carcinoma_CL_PC3_Mock3881915   
SAGE_Skin_Melanoma_B_hs027438952111085   
SAGE_Stomach_carcinoma_B_xenograft_X1016974925   
SAGE_Testis_Embryonal_Carcinoma_CL_hs021263701611675   
SAGE_Thyroid_follicular_adenoma_B_TT00510157835   
SAGE_Vascular_endothelium_normal_liver_associated_AP_NLEC17775925   
SAGE_Brain_astrocytoma_grade_III_B_8289993924   
SAGE_Brain_astrocytoma_grade_II_B_H50112830934   
SAGE_Brain_astrocytoma_grade_II_B_H5638856824   
SAGE_Brain_medulloblastoma_B_98-05-P0408925824   
SAGE_Brain_medulloblastoma_B_98-13-P3014534214   
SAGE_Brain_medulloblastoma_B_H9728537624   
SAGE_Brain_meningioma_grade_II_B_SF21764871114   
SAGE_Breast_Carcinoma_CD24+_C1_IDC314286604974   
SAGE_Breast_Normal_Epithelium_CD44+_N6_N481048765224   
SAGE_Breast_carcinoma_CL_MDA435C4727014   
SAGE_Breast_carcinoma_CL_MDA435H244663114   
SAGE_Breast_metastatic_carcinoma_B_LN14508714   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIFK08594424   
SAGE_Embryonic_stem_cell_HSF6_normal_p50_CL_SHES922448854   
SAGE_Eye_lens_B_UIHI08589824   
SAGE_Heart_normal_B_18306324   
SAGE_Kidney_embryonic_CL_293-control4195514   
SAGE_Kidney_normal_B_14099314   
SAGE_Liver_cholangiocarcinoma_B_K2D4685314   
SAGE_Lung_tumor_associated_chronic_inflammation_B_UIHM09896224   
SAGE_Lymph_Node_normal_B_19942624   
SAGE_Retina_Peripheral_normal_B_4Peri12669134   
SAGE_Rheumatoid_arthritis_synovial_fibroblast_CS4247214   
SAGE_Thyroid_follicular_carcinoma_B_TT00412466434   
SAGE_Vein_normal_B_hs023067556221674   
SAGE_Vein_normal_B_hs023761356881254   
SAGE_Bladder_Cancer_B_hs02654640198783   
SAGE_Bladder_Cancer_B_hs02664244612753   
SAGE_Bone_Marrow_AML_FS_CD34+CD38+6151913   
SAGE_Brain_astrocyte_normal_CL_NHA55148113   
SAGE_Brain_astrocytoma_grade_III_B_34310015823   
SAGE_Brain_astrocytoma_grade_III_B_40710831223   
SAGE_Brain_astrocytoma_grade_III_B_58410300823   
SAGE_Brain_glioblastoma_B_GBM10625976213   
SAGE_Brain_glioblastoma_B_H83310060023   
SAGE_Brain_glioblastoma_CL_28d11062423   
SAGE_Brain_glioblastoma_CL_H3925599013   
SAGE_Brain_medulloblastoma_B_H13225949813   
SAGE_Brain_medulloblastoma_CL_4-HCR6659913   
SAGE_Brain_meningioma_grade_III_B_SF23665978613   
SAGE_Breast_Carcinoma_EPCR+_C6_IDC314208755723   
SAGE_Breast_carcinoma_B_BWHT18_DCIS5070113   
SAGE_Breast_carcinoma_B_IDC-46409513   
SAGE_Breast_carcinoma_associated_myoepithelium_CD10+_AP_DCIS75199313   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC76509113   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC96353913   
SAGE_Breast_carcinoma_associated_stroma_B_DCIS65704913   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC86652013   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC96593513   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_PE25013213   
SAGE_Breast_normal_epithelium_BEREP4+_AP_N25051213   
SAGE_Breast_normal_myoepithelium_CL_HME505551613   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGD010986223   
SAGE_Colon_adenocarcinoma_CL_SW8376114813   
SAGE_Embryo_Pre-Cancer_B_hs032468930161053   
SAGE_Embryonic_stem_cell_H13_normal_p22_CL_SHE1522110143   
SAGE_Embryonic_stem_cell_H1_normal_p54_CL_SHE1621821443   
SAGE_Embryonic_stem_cell_HES4_normal_p36_CL_SHE1120923243   
SAGE_Embryonic_stem_cell_normal_CL_hs02383636083583   
SAGE_Ovary_adenocarcinoma_B_OVT-75351413   
SAGE_Ovary_cystadenoma_CL_ML10-105514413   
SAGE_Prostate_normal_MD_PR3175927713   
SAGE_Retina_Peripheral_normal_B_15966113   
SAGE_Skin_Cancer_B_hs027957032981133   
SAGE_Stomach_carcinoma_B_xenograph_X435162013   
SAGE_Vascular_endothelium_breast_carcinoma_associated_P1H12+_AP_DCIS66531413   
SAGE_Vascular_normal_CS_VEGF+5731613   
SAGE_White_Blood_Cells_monocyte_normal_AP_P110115823   
SAGE_Bone_Marrow_Cancer_FS_hs04054900037572   
SAGE_Brain_Medulloblastoma_CL_UW228-V28082712   
SAGE_Brain_glioblastoma_B_R709909912   
SAGE_Brain_medulloblastoma_B_97-05-P3127429512   
SAGE_Brain_medulloblastoma_B_C6097461212   
SAGE_Brain_normal_cortex_B_BB5429423312   
SAGE_Breast_Normal_Epithelium_CD24+_N1_N339646880972   
SAGE_Breast_Normal_Epithelium_CD24+_N2_N35135842231842   
SAGE_Breast_carcinoma_MD_LCIS6783412   
SAGE_Breast_carcinoma_associated_stroma_B_IDC76802412   
SAGE_Breast_carcinoma_myoepithelium_X_ITGB6+_AP7878512   
SAGE_Breast_normal_epithelium_CD24+_AP_N57646912   
SAGE_Breast_normal_epithelium_MUC1+_AP_N157170412   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N57617312   
SAGE_Cartilage_chondrosarcoma_grade_2_B_UIGA09384612   
SAGE_Cartilage_chondrosarcoma_grade_3_CL_UIIA06802112   
SAGE_Embryonic_stem_cell_BG01_normal_p20_CL_SHE1920166832   
SAGE_Embryonic_stem_cell_H14_normal_p22_CL_SHE1421217032   
SAGE_Embryonic_stem_cell_H1_normal_p31_CL_SHE1727620332   
SAGE_GallBladder_Adenocarcinoma_B_NAM017854812   
SAGE_Lymph_node_Lymphoma_B_hs02045178993622   
SAGE_Prostate_normal_epithelium_CS_confluent7189712   
SAGE_Prostate_normal_epithelium_CS_senescent7171712   
SAGE_Retinal_Pigment_Epithelium_normal_B_4MacRPE7726212   
SAGE_Retinal_Pigment_Epithelium_normal_B_4PeriRPE9019912   
SAGE_Skin_Normal_B_hs02715807686622   
SAGE_Stomach_normal_MD_14S7335312   
SAGE_Vascular_endothelium_hemangioma_B_1467568012   
SAGE_White_Blood_Cells_monocyte_normal_AP_A19991312   
SAGE_Bladder_Cancer_B_hs02413335801311   
SAGE_Bladder_Cancer_B_hs02645833968511   
SAGE_Brain_astrocytoma_grade_III_B_R92710734411   
SAGE_Brain_astrocytoma_grade_II_B_H12711448911   
SAGE_Brain_astrocytoma_grade_II_B_H51610811611   
SAGE_Brain_astrocytoma_grade_II_B_H51811602211   
SAGE_Brain_astrocytoma_grade_II_B_H53010243911   
SAGE_Brain_glioblastoma_B_R2010105311   
SAGE_Brain_glioblastoma_CL_stem_cells10841411   
SAGE_Embryonic_stem_cell_H7_normal_p33_CL_SHE1327246521   
SAGE_Lymph_node_Lymphoma_B_hs01964791481271   
SAGE_Peripheral_Blood_Cancer_B_hs04295756848541   
SAGE_Peripheral_Blood_Cancer_B_hs04306399705581   
SAGE_Placenta_normal_B_111808311   
SAGE_Retina_Peripheral_normal_B_210531211   
SAGE_Retina_macula_normal_B_HMAC210241711   
SAGE_Skin_Cancer_B_hs02843892507271   
SAGE_Skin_Normal_B_hs02724397550421   
SAGE_Skin_Normal_B_hs02824411636231   
SAGE_Urothelium_normal_B_hs02393114307281   
SAGE_Uterus_Normal_B_hs01946452623411   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P110287311   
SAGE_Bone_Marrow_Normal_FS_hs04044842547100   
SAGE_Brain_fetal_normal_B_S130554610   
SAGE_Eye_Retinoblastoma_B_hs038912434232160   
SAGE_Foreskin_normal_B_hs03053940350150   
SAGE_Skin_Cancer_B_hs02803618498150   
SAGE_Skin_Cancer_B_hs0283369223960   
SAGE_Skin_Normal_B_hs02775269789150   
SAGE_Skin_Normal_B_hs0278304222170   
SAGE_Skin_Normal_B_hs02816517089120