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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Digital Northern Results

Search query: CTGTACCTGG

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Tags per 200,000 <2 <4 <8 <16 <32 <64 <128 <256 <512 >512

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Tag CountsTags per
200,000
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Code
SAGE_Colon_adenocarcinoma_CL_HCT116556412382   
SAGE_Colon_adenocarcinoma_CL_SW837611482581   
SAGE_Bladder_Cancer_B_hs02406216426246379   
SAGE_Stomach_adenocarcinoma_MD_HG7937143778   
SAGE_Stomach_carcinoma_B_xenograph_X43516201454   
SAGE_Stomach_normal_MD_14S733531951   
SAGE_Bladder_Cancer_B_hs0241333580184450   
SAGE_Stomach_normal_MD_13S45908939   
SAGE_Pancreas_carcinoma_CL_ASPC31224638   
SAGE_Pancreas_adenocarcinoma_B_96-625233213636   
SAGE_Pancreas_adenocarcinoma_B_91-1611333582635   
SAGE_Stomach_carcinoma_B_xenograft_X101697491234   
SAGE_Stomach_adenocarcinoma_B_G23464925927   
SAGE_Pancreas_adenocarcinoma_CL_CAPAN137674526   
SAGE_Brain_meningioma_grade_I_B_SF446554647725   
SAGE_Ovary_normal_CL_IOSE29EC-1147159625   
SAGE_Brain_normal_leptomeninges_B_AL272473822   
SAGE_Cartilage_chondrosarcoma_grade_2_CL_UIGE077757820   
SAGE_Prostate_normal_MD_PR31759277620   
SAGE_Stomach_adenocarcinoma_MD_HS2958831620   
SAGE_Vascular_normal_CS_VEGF+57316620   
SAGE_Brain_meningioma_grade_I_B_SF427169253617   
SAGE_Colon_adenocarcinoma_CL_Caco260682516   
SAGE_Lung_adenocarcinoma_MD_L1086887716   
SAGE_Stomach_normal_epithelium_B_body124761216   
SAGE_Esophagus_Dysplasia_B_HGD0278611615   
SAGE_Stomach_normal_B_antrum26653215   
SAGE_Brain_ependymoma_B_H58068614514   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGD0109862712   
SAGE_GallBladder_Adenocarcinoma_B_NAM0178548512   
SAGE_Retina_Pigment_epithelium_normal_B_153666311   
SAGE_Vascular_normal_CS_control51642311   
SAGE_Bone_marrow_normal_B_D0136577210   
SAGE_Cartilage_chondrosarcoma_grade_2_B_UIGA093846510   
SAGE_Esophagus_Dysplasia_B_LGD0174904410   
SAGE_Rheumatoid_arthritis_synovial_fibroblast_CS4247229   
SAGE_Stomach_carcinoma_B_G1896307539   
SAGE_Vein_normal_B_hs023067556223289   
SAGE_Brain_meningioma_grade_II_B_SF21764871128   
SAGE_Cartilage_chondrosarcoma_grade_3_CL_UIIA06802138   
SAGE_Brain_glioblastoma_CL_H3925599027   
SAGE_Brain_glioblastoma_CL_H54+EGFRvIII5698227   
SAGE_Breast_Normal_Epithelium_CD44+_N6_N481048765407   
SAGE_Cartilage_chondrosarcoma_grade_2_CL_UIFU07501937   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Normal_Oxygen7928437   
SAGE_Vein_normal_B_hs023761356882197   
SAGE_Brain_oligodendroglioma_B_10013244216   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC96353926   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS78918436   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N15722226   
SAGE_Eye_lens_B_UIHI08589836   
SAGE_Lung_tumor_associated_chronic_inflammation_B_UIHM09896236   
SAGE_Ovary_adenocarcinoma_B_OVT-83198716   
SAGE_Ovary_carcinoma_CL_ES2-13115916   
SAGE_Peritoneum_mesothelioma_B_123252916   
SAGE_Prostate_adenocarcinoma_MD_PR3176495126   
SAGE_Brain_ependymoblastoma_B_8193397515   
SAGE_Brain_glioblastoma_CL_H54+LacZ6690825   
SAGE_Breast_Normal_Epithelium_CD44+_N7_N58110078642915   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS67285725   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N57617325   
SAGE_Embryonic_stem_cell_H13_normal_p22_CL_SHE1522110165   
SAGE_Esophagus_Adenocarcinoma_B_CA1D7379325   
SAGE_GallBladder_Adenocarcinoma_B_HAIIb6698825   
SAGE_Lung_adenocarcinoma_MD_L93591615   
SAGE_White_Blood_Cells_breast_carcinoma_associated_CD45+_AP_IDC73439915   
SAGE_Brain_ependymoma_B_2394665314   
SAGE_Brain_glioblastoma_B_H13714933814   
SAGE_Brain_normal_substantia_nigra_B_14177314   
SAGE_Breast_carcinoma_B_DCIS-54309814   
SAGE_Breast_carcinoma_CL_MDA435C4727014   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIFK08594424   
SAGE_Colon_normal_B_NC14961014   
SAGE_Embryonic_stem_cell_H7_normal_p33_CL_SHE1327246564   
SAGE_GallBladder_Adenocarcinoma_B_C018138024   
SAGE_Ovary_adenocarcinoma_B_OVT-64144314   
SAGE_Ovary_normal_CS_HOSE_44772814   
SAGE_Stomach_adenocarcinoma_MD_G3294680214   
SAGE_Testis_Embryonal_Carcinoma_CL_hs021359354901374   
SAGE_Brain_astrocyte_normal_CL_NHA55148113   
SAGE_Brain_ependymoma_B_13945631413   
SAGE_Brain_ependymoma_B_R5825218913   
SAGE_Brain_medulloblastoma_B_96-04-P0195264513   
SAGE_Breast_carcinoma_CL_MCF7estradiol_3h6016213   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC76509113   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS-26616813   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC86652013   
SAGE_Breast_carcinoma_epithelium_CD44+_AP_ASC35247813   
SAGE_Breast_carcinoma_epithelium_PROCR+_AP_IDC295408013   
SAGE_Breast_normal_epithelium_CD44+_AP_N25600813   
SAGE_Embryonic_stem_cell_H1_normal_p31_CL_SHE1727620353   
SAGE_Embryonic_stem_cell_HES4_normal_p36_CL_SHE1120923243   
SAGE_Embryonic_stem_cell_HSF6_normal_p50_CL_SHES922448843   
SAGE_Liver_normal_B_16630813   
SAGE_Muscle_Rhabdomyosarcoma_B_16127013   
SAGE_Retina_Peripheral_normal_B_15966113   
SAGE_Universal_reference_human_RNA_CL5172913   
SAGE_Uterus_Normal_B_hs019464526231113   
SAGE_Vascular_endothelium_breast_carcinoma_associated_P1H12+_AP_DCIS66531413   
SAGE_Bladder_Cancer_B_hs02664244612492   
SAGE_Brain_Medulloblastoma_CL_425Otx2siRNA9729112   
SAGE_Brain_astrocytoma_grade_III_B_8289993912   
SAGE_Brain_glioblastoma_B_H11106898612   
SAGE_Brain_glioblastoma_B_H1425C8899012   
SAGE_Brain_medulloblastoma_B_97-05-P0156997112   
SAGE_Brain_medulloblastoma_B_97-05-P3127429512   
SAGE_Brain_medulloblastoma_B_DL76839212   
SAGE_Breast_Normal_Epithelium_CD44+_N5_N471890938212   
SAGE_Breast_carcinoma_associated_myoepithelium_CD10+_AP_DCIS68145212   
SAGE_Breast_normal_epithelium_CD24+_AP_N57646912   
SAGE_Breast_normal_epithelium_CD44+_AP_N58046412   
SAGE_Colon_carcinoma_CL_Hct116_wildtype_p53_Normal_Oxygen8039812   
SAGE_GallBladder_Normal_B_HN8570612   
SAGE_Heart_normal_B_18306312   
SAGE_Lung_normal_B_18870812   
SAGE_Lymph_Node_normal_B_19942612   
SAGE_Ovary_endometriosis_CL_E127609712   
SAGE_Placenta_first_trimester_normal_B_18926512   
SAGE_Testis_Embryonal_Carcinoma_CL_hs02126370161812   
SAGE_Vascular_endothelium_hemangioma_B_1467568012   
SAGE_Brain_astrocytoma_grade_III_B_43910782411   
SAGE_Brain_astrocytoma_grade_III_B_58410300811   
SAGE_Brain_astrocytoma_grade_III_B_R14011873311   
SAGE_Brain_astrocytoma_grade_II_B_H12711448911   
SAGE_Brain_astrocytoma_grade_II_B_H38810628511   
SAGE_Brain_astrocytoma_grade_II_B_H51811602211   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES115173511   
SAGE_Retina_Macula_normal_B_4Mac10141711   
SAGE_Retina_Peripheral_normal_B_4Peri12669111   
SAGE_Retina_macula_normal_B_HMAC210241711   
SAGE_Retina_normal_B_4cRet10370111   
SAGE_Skin_Normal_B_hs02775269789491   
SAGE_Thyroid_normal_B_00111593811   
SAGE_Uterus_normal_B_hs01953718463261   
SAGE_Bladder_Cancer_B_hs0265464019870   
SAGE_Breast_Carcinoma_CD24+_C1_IDC314286604150   
SAGE_Breast_Carcinoma_CD24+_C2_IDC34472096010   
SAGE_Breast_Carcinoma_CD24+_C3_IDC384117410170   
SAGE_Breast_Carcinoma_CD24+_C4_IDC40357091010   
SAGE_Breast_Carcinoma_EPCR+_C5_IDC273796568170   
SAGE_Breast_Carcinoma_EPCR+_C6_IDC314208755110   
SAGE_Breast_Carcinoma_SSEA4+_C7_IDC403381240100   
SAGE_Breast_Normal_Epithelium_CD24+_N1_N339646880100   
SAGE_Breast_Normal_Epithelium_CD24+_N2_N351358422350   
SAGE_Breast_Normal_Epithelium_CD24+_N3_N47303600240   
SAGE_Breast_Normal_Epithelium_CD24+_N4_N48180227410   
SAGE_Embryo_Pre-Cancer_B_hs0324689301660   
SAGE_Embryonic_stem_cell_H1_normal_p54_CL_SHE1621821410   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES240143220   
SAGE_Embryonic_stem_cell_normal_CL_hs0238363608340   
SAGE_Eye_Retinoblastoma_B_hs03891243423220   
SAGE_Foreskin_normal_B_hs0305394035090   
SAGE_Lymph_node_Lymphoma_B_hs02045178993190   
SAGE_Skin_Cancer_B_hs02795703298120   
SAGE_Skin_Cancer_B_hs0280361849820   
SAGE_Skin_Cancer_B_hs0283369223940   
SAGE_Skin_Melanoma_B_hs02765631800120   
SAGE_Skin_Normal_B_hs02715807686190   
SAGE_Skin_Normal_B_hs02724397550150   
SAGE_Skin_Normal_B_hs0278304222180   
SAGE_Skin_Normal_B_hs0281651708980   
SAGE_Urothelium_normal_B_hs0239311430770