Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
SAGE Genie
  • Human SAGE Genie Tools
  • Downloads
  • Digital Karyotyping
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Digital Northern Results

Search query: CTGGCCATCG

Color Code                              
Tags per 200,000 <2 <4 <8 <16 <32 <64 <128 <256 <512 >512

LibraryTotal Tags
in Library
Tag CountsTags per
200,000
Color
Code
SAGE_White_Blood_Cells_monocytes_normal_AP_C110165680157   
SAGE_White_Blood_Cells_lung_macrophage_normal_AP_L15187240154   
SAGE_White_Blood_Cells_monocyte_normal_AP_A19991369138   
SAGE_White_Blood_Cells_monocytes_normal_AP_A29878668137   
SAGE_White_Blood_Cells_monocyte_depleted_mononuclear_cells_normal_AP_A15379535130   
SAGE_White_Blood_Cells_monocyte_normal_AP_P110115866130   
SAGE_White_Blood_Cells_monocytes_normal_AP_P25442633121   
SAGE_White_Blood_Cells_monocyte_depleted_mononuclear_cells_normal_AP_P1516342389   
SAGE_Breast_carcinoma_epithelium_CD44+_AP_PE2523422387   
SAGE_Muscle_Rhabdomyosarcoma_B_1612701755   
SAGE_Muscle_normal_B_old538891555   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P2502971455   
SAGE_Brain_glioblastoma_CL_H54+LacZ669081544   
SAGE_Pancreas_adenocarcinoma_B_96-625233213742   
SAGE_Colon_normal_B_NC1496101040   
SAGE_Muscle_normal_B_young539471140   
SAGE_Breast_carcinoma_myoepithelium_X_ITGB6+_AP787851538   
SAGE_Pancreas_adenocarcinoma_CL_CAPAN137674737   
SAGE_Pancreas_normal_CS_H12632223637   
SAGE_Brain_glioblastoma_CL_H54+EGFRvIII569821035   
SAGE_Breast_carcinoma_epithelium_CD44+_AP_ASC352478934   
SAGE_Peripheral_Blood_Cancer_B_hs0429575684893632   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_PE250132831   
SAGE_Pancreas_normal_CS_HX31985531   
SAGE_Vascular_endothelium_normal_breast_associated_P1H12+_AP_157023931   
SAGE_Brain_ependymoma_B_H580686141029   
SAGE_Pancreas_adenocarcinoma_B_91-1611333582529   
SAGE_Breast_normal_epithelium_CD44+_AP_N256008828   
SAGE_Lung_adenocarcinoma_MD_L10868871227   
SAGE_Breast_carcinoma_B_BWHT18_DCIS50701623   
SAGE_White_Blood_Cells_breast_carcinoma_associated_CD45+_AP_IDC734399423   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P11028731223   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS7891841022   
SAGE_Colon_adenocarcinoma_CL_SW83761148722   
SAGE_White_Blood_Cells_breast_carcinoma_associated_CD45+_AP_DCIS666176721   
SAGE_Brain_meningioma_grade_II_B_SF217648711520   
SAGE_Bone_Marrow_AML_FS_CD34+CD38+61519619   
SAGE_Breast_Carcinoma_EPCR+_C5_IDC27379656836219   
SAGE_Colon_adenocarcinoma_CL_RKO51294519   
SAGE_Pancreas_carcinoma_CL_ASPC31224319   
SAGE_Prostate_carcinoma_CL_PC3_AS240768419   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC765091618   
SAGE_Breast_carcinoma_epithelium_PROCR+_AP_IDC2852781518   
SAGE_Ovary_cystadenoma_CL_ML10-1055144518   
SAGE_Peritoneum_mesothelioma_B_1232529318   
SAGE_Rheumatoid_arthritis_synovial_fibroblast_CS42472418   
SAGE_Brain_glioblastoma_CL_H39255990517   
SAGE_Colon_carcinoma_CL_Hct116_wildtype_p53_Anoxia79015717   
SAGE_Bone_marrow_normal_B_D0136577316   
SAGE_Brain_fetal_normal_B_S13055462516   
SAGE_Brain_glioblastoma_hypoxia_CL_H24771765616   
SAGE_Colon_normal_B_NC248479416   
SAGE_Lung_adenocarcinoma_MD_L935916316   
SAGE_Lymph_Node_Lymphoma_B_172008616   
SAGE_Brain_glioblastoma_B_H1425C88990715   
SAGE_Breast_carcinoma_epithelium_X_MUC1+_AP75147615   
SAGE_Skin_Melanoma_B_hs0275412822131615   
SAGE_Breast_Carcinoma_CD24+_C1_IDC31428660431014   
SAGE_Breast_Carcinoma_EPCR+_C6_IDC31420875530014   
SAGE_Breast_carcinoma_CL_ZR75_1_tamoxifen40052314   
SAGE_Breast_normal_epithelium_CD24+_AP_N1541430314   
SAGE_Breast_normal_epithelium_CD44+_AP_N580464614   
SAGE_Colon_adenocarcinoma_B_Tu9841371314   
SAGE_Ovary_adenocarcinoma_B_OVT-753514414   
SAGE_Peritoneum_normal_B_1353527414   
SAGE_Skin_Normal_B_hs0277526978938814   
SAGE_Brain_glioblastoma_control_CL_H24760428413   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC873967513   
SAGE_Breast_normal_epithelium_MUC1+_AP_N576227513   
SAGE_Breast_phyllodes_tumor_fibroblasts_AP_07020259575413   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGX088439613   
SAGE_Pancreas_carcinoma_CL_PL4529557213   
SAGE_Skin_Melanoma_B_hs0276563180039313   
SAGE_Breast_carcinoma_CL_ZR75_1_untreated32303212   
SAGE_Cartilage_chondrosarcoma_grade_1_CL_UIIC033081212   
SAGE_Leukocytes_normal_B_147873312   
SAGE_Lung_tumor_associated_chronic_inflammation_B_UIHM098962612   
SAGE_Ovary_adenocarcinoma_B_OVT-831987212   
SAGE_Ovary_normal_CL_IOSE29EC-1147159312   
SAGE_Testis_Embyronal_Carcinoma_B_166352412   
SAGE_Brain_ependymoblastoma_B_81933975211   
SAGE_Breast_carcinoma_epithelium_PROCR+_AP_IDC2954080311   
SAGE_Breast_normal_FS_NER34565211   
SAGE_Breast_normal_epithelium_BEREP4+_AP_N250512311   
SAGE_Breast_normal_stroma_B_IDC850485311   
SAGE_Prostate_normal_epithelium_CS_senescent71717411   
SAGE_Brain_Medulloblastoma_CL_UW228-N94937510   
SAGE_Breast_carcinoma_epithelium_BerEP4+AP_IDC773410410   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N576173410   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Anoxia79053410   
SAGE_Esophagus_Normal_B_CN0175634410   
SAGE_GallBladder_Adenocarcinoma_B_NAM0178548410   
SAGE_Brain_ependymoma_B_11506237339   
SAGE_Brain_normal_cortex_B_pool66245139   
SAGE_Breast_Normal_Epithelium_CD44+_N6_N481048765489   
SAGE_Breast_carcinoma_B_CT15_IDC2184019   
SAGE_Breast_carcinoma_B_IDC-46409539   
SAGE_Breast_carcinoma_associated_myoepithelium_CD10+_AP_DCIS68145249   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC86652039   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N156399439   
SAGE_Eye_lens_B_UIHI08589849   
SAGE_GallBladder_Adenocarcinoma_B_C018138049   
SAGE_Lung_normal_CL_L154222629   
SAGE_Pelvis_mixoid_chondrosarcoma_grade2_B_UIHT08357749   
SAGE_Peripheral_Blood_Cancer_B_hs043063997053199   
SAGE_Skin_Normal_B_hs027830422211469   
SAGE_Brain_ependymoma_B_2394665328   
SAGE_Brain_ependymoma_B_R62812043158   
SAGE_Brain_normal_leptomeninges_B_AL27247338   
SAGE_Brain_normal_thalamus_B_12401518   
SAGE_Breast_carcinoma_MD_LCIS6783438   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS67285738   
SAGE_Breast_normal_epithelium_BEREP4+_AP_N14872928   
SAGE_Breast_normal_myoepithelium_CD10+_AP_IDC76900638   
SAGE_Cartilage_chondrosarcoma_grade_3_CL_UIIA06802138   
SAGE_Esophagus_Dysplasia_B_LGD017490438   
SAGE_Kidney_Glomeruli_Normal_B_bjballer14890528   
SAGE_Skin_Normal_B_hs028244116361908   
SAGE_Brain_ependymoma_B_R5825218927   
SAGE_Brain_glioblastoma_B_pooled5642827   
SAGE_Colon_adenocarcinoma_CL_HCT1165564127   
SAGE_GallBladder_Normal_B_HN8570637   
SAGE_Lymph_node_Lymphoma_B_hs020451789931847   
SAGE_Vascular_endothelium_normal_liver_associated_AP_NLEC17775937   
SAGE_Brain_Medulloblastoma_CL_425Otx2siRNA9729136   
SAGE_Brain_normal_cortex_B_BB5429423336   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC96353926   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC96593526   
SAGE_Lung_normal_CL_L162898316   
SAGE_Skin_Normal_B_hs028165170892266   
SAGE_Uterus_normal_B_hs019537184631166   
SAGE_Vascular_endothelium_breast_carcinoma_associated_P1H12+_AP_DCIS66531426   
SAGE_White_Blood_Cells_normal_breast_associated_CD45+_AP3198516   
SAGE_Bladder_Cancer_B_hs026458339681645   
SAGE_Bladder_Cancer_B_hs026642446121155   
SAGE_Brain_astrocytoma_grade_III_B_H105510988635   
SAGE_Brain_glioblastoma_B_H11106898625   
SAGE_Brain_glioblastoma_CL_stem_cells10841435   
SAGE_Brain_medulloblastoma_B_12733861415   
SAGE_Breast_carcinoma_B_95-2593936415   
SAGE_Breast_normal_epithelium_CD24+_AP_N57646925   
SAGE_Cartilage_chondrosarcoma_grade_2_CL_UIGE07775725   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Normal_Oxygen7928425   
SAGE_Embryonic_stem_cell_HSF6_normal_p50_CL_SHES922448865   
SAGE_Esophagus_Dysplasia_B_HGD027861125   
SAGE_GallBladder_Adenocarcinoma_B_HAIIb6698825   
SAGE_Skin_Cancer_B_hs02833692239955   
SAGE_Skin_Cancer_B_hs02843892507995   
SAGE_Skin_Normal_B_hs027243975501135   
SAGE_Bladder_Cancer_B_hs026546401981094   
SAGE_Bone_marrow_normal_AP_CD34+/CD38+/lin+8159524   
SAGE_Bone_marrow_normal_AP_CD34+/CD38-/lin-8639124   
SAGE_Brain_astrocytoma_grade_II_B_H5638856824   
SAGE_Brain_glioblastoma_B_H13714933814   
SAGE_Brain_medulloblastoma_B_98-05-P6084845114   
SAGE_Brain_meningioma_grade_II_B_SF36224485714   
SAGE_Brain_normal_cerebellum_B_BB5424050014   
SAGE_Breast_carcinoma_B_DCIS-54309814   
SAGE_Breast_carcinoma_CL_MDA435H244663114   
SAGE_Breast_carcinoma_MD_DCIS4078314   
SAGE_Breast_metastatic_carcinoma_B_LN14508714   
SAGE_Breast_normal_epithelium_CD24+_AP_N24155114   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIFK08594424   
SAGE_Colon_carcinoma_CL_Hct116_wildtype_p53_Normal_Oxygen8039824   
SAGE_Embryonic_stem_cell_H13_normal_p22_CL_SHE1522110154   
SAGE_Ovary_adenocarcinoma_B_OVT-64144314   
SAGE_Stomach_adenocarcinoma_MD_G3294680214   
SAGE_Stomach_normal_MD_13S4590814   
SAGE_Brain_Medulloblastoma_CL_425C26264213   
SAGE_Brain_astrocyte_normal_CL_NHA55148113   
SAGE_Brain_astrocytoma_grade_III_B_40710831223   
SAGE_Brain_astrocytoma_grade_II_B_H51610811623   
SAGE_Brain_ependymoma_B_R102312269023   
SAGE_Brain_medulloblastoma_B_96-04-P0195264513   
SAGE_Brain_meningioma_grade_III_B_SF23665978613   
SAGE_Brain_meningioma_grade_I_B_SF44655464713   
SAGE_Breast_Carcinoma_CD24+_C3_IDC384117410623   
SAGE_Breast_Normal_Epithelium_CD24+_N3_N473036002583   
SAGE_Breast_Normal_Epithelium_CD44+_N7_N58110078642173   
SAGE_Breast_carcinoma_B_DCIS-46060513   
SAGE_Breast_carcinoma_associated_myoepithelium_CD10+_AP_DCIS75199313   
SAGE_Breast_carcinoma_associated_stroma_B_DCIS65704913   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_IDC285795613   
SAGE_Breast_metastatic_carcinoma_B_LN26034313   
SAGE_Breast_normal_B_gestational hyperplasia16170413   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N15722213   
SAGE_Breast_normal_myoepithelium_CL_HME505551613   
SAGE_Breast_normal_organoid_B5818113   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGD010986223   
SAGE_Colon_adenocarcinoma_B_Tu1025570013   
SAGE_Colon_adenocarcinoma_CL_Caco26068213   
SAGE_Embryo_Pre-Cancer_B_hs032468930161113   
SAGE_Embryonic_stem_cell_HES3_normal_p16_CL_SHE1020535343   
SAGE_Foreskin_normal_B_hs03053940350663   
SAGE_Kidney_carcinoma_B_D210028123   
SAGE_Liver_cholangiocarcinoma_CL_K35484213   
SAGE_Liver_cholangiocarcinoma_CL_K45297313   
SAGE_Prostate_adenocarcinoma_MD_PR3176495113   
SAGE_Prostate_carcinoma_CL_LNCaP6025013   
SAGE_Prostate_carcinoma_CL_LNCaP_no-DHT6216013   
SAGE_Prostate_normal_B_26405813   
SAGE_Prostate_normal_MD_PR3175927713   
SAGE_Stomach_adenocarcinoma_B_G2346492513   
SAGE_Uterus_Normal_B_hs019464526231113   
SAGE_Vascular_normal_CS_control5164213   
SAGE_Brain_Medulloblastoma_CL_UW228-V28082712   
SAGE_Brain_astrocytoma_grade_III_B_8289993912   
SAGE_Brain_astrocytoma_grade_III_B_H2729605912   
SAGE_Brain_ependymoma_B_R3537382212   
SAGE_Brain_ependymoma_B_R5127537912   
SAGE_Brain_medulloblastoma_B_DL58367112   
SAGE_Brain_meningioma_grade_I_B_SF42716925312   
SAGE_Breast_Normal_Epithelium_CD24+_N1_N3396468801252   
SAGE_Breast_Normal_Epithelium_CD24+_N4_N481802274202   
SAGE_Breast_Normal_Epithelium_CD44+_N5_N471890938232   
SAGE_Breast_normal_epithelium_MUC1+_AP_N157170412   
SAGE_Cartilage_chondrosarcoma_grade_2_CL_UIFU07501912   
SAGE_Embryonic_stem_cell_H7_normal_p33_CL_SHE1327246532   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES240143262   
SAGE_Heart_normal_B_18306312   
SAGE_Lung_normal_B_18870812   
SAGE_Retinal_Pigment_Epithelium_normal_B_4MacRPE7726212   
SAGE_Skin_Cancer_B_hs02803618498452   
SAGE_Skin_Melanoma_B_hs02743895211542   
SAGE_Stomach_carcinoma_B_xenograft_X1016974912   
SAGE_Brain_astrocytoma_grade_III_B_43910782411   
SAGE_Brain_astrocytoma_grade_II_B_H35910576411   
SAGE_Brain_glioblastoma_CL_4d11521211   
SAGE_Breast_Carcinoma_CD24+_C2_IDC344720960401   
SAGE_Breast_Normal_Epithelium_CD24+_N2_N3513584223991   
SAGE_Embryonic_stem_cell_H1_normal_p54_CL_SHE1621821421   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES115173511   
SAGE_Embryonic_stem_cell_HES4_normal_p36_CL_SHE1120923221   
SAGE_Placenta_normal_B_111808311   
SAGE_Retina_Peripheral_normal_B_4Peri12669111   
SAGE_Thyroid_follicular_adenoma_B_TT00510157811   
SAGE_Vein_normal_B_hs02376135688351   
SAGE_Bladder_Cancer_B_hs02406216426210   
SAGE_Breast_Carcinoma_CD24+_C4_IDC40357091010   
SAGE_Breast_Carcinoma_SSEA4+_C7_IDC403381240140   
SAGE_Embryonic_stem_cell_H1_normal_p31_CL_SHE1727620310   
SAGE_Eye_Retinoblastoma_B_hs03891243423250   
SAGE_Lymph_node_Lymphoma_B_hs0196479148120   
SAGE_Skin_Cancer_B_hs0279570329840   
SAGE_Skin_Melanoma_B_hs02733881770150   
SAGE_Skin_Normal_B_hs02715807686240   
SAGE_Testis_Embryonal_Carcinoma_CL_hs0212637016130   
SAGE_Testis_Embryonal_Carcinoma_CL_hs0213593549050   
SAGE_Urothelium_normal_B_hs0239311430790   
SAGE_Vein_normal_B_hs02306755622180