Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
SAGE Genie
  • Human SAGE Genie Tools
  • Downloads
  • Digital Karyotyping
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Digital Northern Results

Search query: CTGCAGACCC

Color Code                              
Tags per 200,000 <2 <4 <8 <16 <32 <64 <128 <256 <512 >512

LibraryTotal Tags
in Library
Tag CountsTags per
200,000
Color
Code
SAGE_Prostate_carcinoma_CL_LNCaP_no-DHT621602270   
SAGE_Prostate_carcinoma_CL_LNCaP-C400291049   
SAGE_Prostate_adenocarcinoma_CL_LNCaP22344544   
SAGE_Colon_adenocarcinoma_B_Tu9841371943   
SAGE_Brain_Medulloblastoma_CL_UW228-V2808271742   
SAGE_Ovary_normal_CL_IOSE29EC-11471591042   
SAGE_Prostate_carcinoma_CL_LNCaP-T43542941   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS7891841738   
SAGE_Kidney_carcinoma_B_D21002811937   
SAGE_Ovary_carcinoma_CL_A278021369437   
SAGE_Brain_normal_thalamus_B_124015433   
SAGE_Muscle_normal_B_old53889933   
SAGE_Muscle_normal_B_young53947933   
SAGE_Bone_Marrow_Cancer_FS_hs0405490003780732   
SAGE_Pancreas_adenocarcinoma_CL_Panc124749432   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_IDC2857956931   
SAGE_Prostate_normal_B_2640581031   
SAGE_Brain_meningioma_grade_III_B_SF236659786930   
SAGE_Breast_carcinoma_associated_myoepithelium_CD10+_AP_DCIS751993830   
SAGE_Pancreas_adenocarcinoma_B_91-1611333582529   
SAGE_Breast_normal_FS_NER34565528   
SAGE_Brain_ependymoma_B_R10231226901727   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P250297727   
SAGE_Brain_ependymoma_B_H58068614926   
SAGE_Colon_adenocarcinoma_CL_Caco260682826   
SAGE_Embryonic_stem_cell_H1_normal_p31_CL_SHE172762033726   
SAGE_Esophagus_Normal_B_CN01756341026   
SAGE_Prostate_carcinoma_CL_A+30298426   
SAGE_Prostate_carcinoma_CL_LNCaP60250826   
SAGE_Breast_carcinoma_B_95-25939364525   
SAGE_Colon_carcinoma_CL_Hct116_wildtype_p53_Anoxia790151025   
SAGE_Kidney_embryonic_CL_293+beta-catenin23519325   
SAGE_Bone_marrow_normal_AP_CD34+/CD38+/lin+815951024   
SAGE_Breast_carcinoma_CL_ZR75_1_untreated32303424   
SAGE_Breast_normal_epithelium_CD24+_AP_N1541430524   
SAGE_Prostate_carcinoma_B_pool266034824   
SAGE_White_Blood_Cells_monocytes_normal_AP_C11016561223   
SAGE_Ovary_adenocarcinoma_B_OVT-753514622   
SAGE_Brain_ependymoma_B_23946653521   
SAGE_Pancreas_adenocarcinoma_CL_CAPAN137674421   
SAGE_Brain_astrocytoma_grade_III_B_4071083121120   
SAGE_Brain_glioblastoma_CL_4d1152121220   
SAGE_Brain_glioblastoma_CL_H54+LacZ66908720   
SAGE_Embryonic_stem_cell_H1_normal_p54_CL_SHE162182142220   
SAGE_White_Blood_Cells_monocytes_normal_AP_A2987861020   
SAGE_Breast_carcinoma_CL_ZR75_1_tamoxifen40052419   
SAGE_Breast_carcinoma_epithelium_CD44+_AP_ASC352478519   
SAGE_Breast_normal_epithelium_MUC1+_AP_N1571704719   
SAGE_Embryonic_stem_cell_H7_normal_p33_CL_SHE132724652719   
SAGE_Heart_normal_B_183063819   
SAGE_Pancreas_carcinoma_CL_ASPC31224319   
SAGE_Pelvis_mixoid_chondrosarcoma_grade2_B_UIHT083577819   
SAGE_Cartilage_chondrosarcoma_grade_1_CL_UIIC033081318   
SAGE_Embryonic_stem_cell_HES3_normal_p16_CL_SHE102053531918   
SAGE_Lung_adenocarcinoma_MD_L1086887818   
SAGE_Lung_normal_CL_L1542226418   
SAGE_Pancreas_adenocarcinoma_B_96-625233213318   
SAGE_Peritoneum_mesothelioma_B_1232529318   
SAGE_Colon_adenocarcinoma_CL_HCT11655641517   
SAGE_Embryonic_stem_cell_HES4_normal_p36_CL_SHE112092321817   
SAGE_Embryonic_stem_cell_HSF6_normal_p50_CL_SHES92244882017   
SAGE_Esophagus_Dysplasia_B_HGD0278611717   
SAGE_GallBladder_Adenocarcinoma_B_NAM0178548717   
SAGE_Bone_Marrow_AML_FS_CD34+CD38+61519516   
SAGE_Brain_ependymoma_B_R6281204311016   
SAGE_Breast_normal_epithelium_BEREP4+_AP_N148729416   
SAGE_Colon_normal_B_NC248479416   
SAGE_Lung_adenocarcinoma_MD_L935916316   
SAGE_Skin_Melanoma_B_hs0276563180045616   
SAGE_Bladder_Cancer_B_hs0265464019835515   
SAGE_Brain_astrocyte_normal_CL_NHA551481415   
SAGE_Brain_ependymoma_B_R45551825415   
SAGE_Brain_medulloblastoma_CL_4-HCR66599515   
SAGE_Breast_Carcinoma_CD24+_C1_IDC31428660432215   
SAGE_Breast_carcinoma_myoepithelium_X_ITGB6+_AP78785615   
SAGE_Embryonic_stem_cell_H13_normal_p22_CL_SHE152211011715   
SAGE_Prostate_adenocarcinoma_MD_PR31764951515   
SAGE_Stomach_normal_B_antrum26653215   
SAGE_Bone_Marrow_Normal_FS_hs0404484254735114   
SAGE_Brain_Medulloblastoma_CL_UW228-N94937714   
SAGE_Brain_astrocytoma_grade_II_B_H516108116814   
SAGE_Brain_oligodendroglioma_B_H98827864214   
SAGE_Cartilage_chondrosarcoma_grade_3_CL_UIIA068021514   
SAGE_Colon_adenocarcinoma_B_Tu10255700414   
SAGE_Ovary_adenocarcinoma_B_OVT-641443314   
SAGE_White_Blood_Cells_monocyte_depleted_mononuclear_cells_normal_AP_A153795414   
SAGE_Brain_glioblastoma_control_CL_H24760428413   
SAGE_Brain_glioblastoma_hypoxia_CL_H24771765513   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS672857513   
SAGE_Breast_carcinoma_epithelium_X_MUC1+_AP75147513   
SAGE_Breast_metastatic_carcinoma_B_LN145087313   
SAGE_Breast_normal_epithelium_CD24+_AP_N576469513   
SAGE_Breast_normal_epithelium_MUC1+_AP_N576227513   
SAGE_Colon_adenocarcinoma_CL_SW83761148413   
SAGE_Prostate_normal_MD_PR31759277413   
SAGE_Vascular_endothelium_hemangioma_B_14675680513   
SAGE_Brain_astrocytoma_grade_III_B_439107824712   
SAGE_Brain_astrocytoma_grade_III_B_82899939612   
SAGE_Brain_ependymoma_B_115062373412   
SAGE_Brain_glioblastoma_B_H137149338312   
SAGE_Breast_Carcinoma_EPCR+_C6_IDC31420875525812   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC765091412   
SAGE_Breast_carcinoma_metastasis_B_249794312   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Anoxia79053512   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Normal_Oxygen79284512   
SAGE_Kidney_Glomeruli_Normal_B_bjballer148905312   
SAGE_Pancreas_normal_CS_HX31985212   
SAGE_Testis_Embyronal_Carcinoma_B_166352412   
SAGE_White_Blood_Cells_monocyte_normal_AP_A199913612   
SAGE_Brain_ependymoma_B_R58252189311   
SAGE_Brain_medulloblastoma_B_DL583671511   
SAGE_Brain_medulloblastoma_B_DL768392411   
SAGE_Breast_carcinoma_B_BWHT18_DCIS50701311   
SAGE_Breast_carcinoma_MD_LCIS67834411   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_PE250132311   
SAGE_Breast_carcinoma_epithelium_PROCR+_AP_IDC2852781311   
SAGE_Breast_normal_stroma_B_IDC850485311   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES24014322311   
SAGE_White_Blood_Cells_breast_carcinoma_associated_CD45+_AP_IDC734399211   
SAGE_White_Blood_Cells_monocyte_depleted_mononuclear_cells_normal_AP_P151634311   
SAGE_Bladder_Cancer_B_hs0240621642633510   
SAGE_Bone_marrow_normal_B_D0136577210   
SAGE_Brain_astrocytoma_grade_II_B_H501128309710   
SAGE_Brain_ependymoma_B_R51275379410   
SAGE_Brain_glioblastoma_B_R7099099510   
SAGE_Brain_glioblastoma_B_pooled56428310   
SAGE_Brain_glioblastoma_CL_H39255990310   
SAGE_Brain_glioblastoma_CL_H54+EGFRvIII56982310   
SAGE_Breast_carcinoma_CL_ZR75_1_estrogen38797210   
SAGE_Cartilage_chondrosarcoma_grade_2_CL_UIGE077757410   
SAGE_Embryonic_stem_cell_BG01_normal_p20_CL_SHE192016681110   
SAGE_Lung_tumor_associated_chronic_inflammation_B_UIHM098962510   
SAGE_Spinal_cord_normal_B_154785310   
SAGE_Bone_marrow_normal_AP_CD34+/CD38-/lin-8639149   
SAGE_Brain_Medulloblastoma_CL_425C26264239   
SAGE_Brain_astrocytoma_grade_II_B_H5638856849   
SAGE_Brain_fetal_normal_B_S1305546159   
SAGE_Breast_Carcinoma_CD24+_C3_IDC3841174102059   
SAGE_Breast_carcinoma_B_DCIS-46060539   
SAGE_Breast_carcinoma_B_DCIS-54309829   
SAGE_Breast_carcinoma_MD_DCIS4078329   
SAGE_Breast_normal_epithelium_CD24+_AP_N24155129   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N156399439   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGX08843949   
SAGE_Colon_carcinoma_CL_Hct116_wildtype_p53_Normal_Oxygen8039849   
SAGE_Eye_lens_B_UIHI08589849   
SAGE_Kidney_embryonic_CL_293-control4195529   
SAGE_Kidney_normal_B_14099329   
SAGE_Liver_normal_B_16630839   
SAGE_Skin_melanoma_B_DB24133829   
SAGE_Stomach_adenocarcinoma_B_G2346492539   
SAGE_White_Blood_Cells_monocyte_normal_AP_P110115859   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P110287359   
SAGE_Brain_glioblastoma_B_H1425C8899048   
SAGE_Brain_medulloblastoma_B_97-05-P3127429538   
SAGE_Brain_medulloblastoma_B_98-05-P6084845128   
SAGE_Brain_medulloblastoma_B_98-13-P3014534228   
SAGE_Brain_medulloblastoma_CL_mhh-14785828   
SAGE_Brain_meningioma_grade_II_B_SF36224485728   
SAGE_Breast_Carcinoma_CD24+_C2_IDC3447209602108   
SAGE_Breast_carcinoma_B_IDC-36889138   
SAGE_Breast_carcinoma_epithelium_BerEP4+AP_IDC77341038   
SAGE_Colon_normal_B_NC14961028   
SAGE_Esophagus_Adenocarcinoma_B_CA1D7379338   
SAGE_Esophagus_Dysplasia_B_LGD017490438   
SAGE_Leukocytes_normal_B_14787328   
SAGE_Lymph_Node_Lymphoma_B_17200838   
SAGE_Placenta_first_trimester_normal_B_18926548   
SAGE_Prostate_carcinoma_B_LN-12259918   
SAGE_Stomach_normal_epithelium_B_body12476118   
SAGE_Uterus_normal_B_hs019537184631558   
SAGE_Bladder_Cancer_B_hs026458339682167   
SAGE_Brain_astrocytoma_grade_III_B_H97010698247   
SAGE_Brain_astrocytoma_grade_II_B_H38810628547   
SAGE_Brain_glioblastoma_B_H83310060047   
SAGE_Brain_glioblastoma_CL_28d11062447   
SAGE_Brain_meningioma_grade_I_B_SF44655464727   
SAGE_Brain_normal_cerebellum_B_15038527   
SAGE_Breast_fibroadenoma_MD5568827   
SAGE_Breast_normal_epithelium_CD44+_AP_N25600827   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N57617337   
SAGE_Cartilage_chondrosarcoma_grade_2_CL_UIFU07501937   
SAGE_Colon_adenocarcinoma_CL_RKO5129427   
SAGE_Embryonic_stem_cell_H14_normal_p22_CL_SHE1421217087   
SAGE_GallBladder_Normal_B_HN8570637   
SAGE_Liver_cholangiocarcinoma_CL_K45297327   
SAGE_Ovary_cystadenoma_CL_ML10-105514427   
SAGE_Brain_Medulloblastoma_CL_425Otx2siRNA9729136   
SAGE_Brain_astrocytoma_grade_III_B_R14011873346   
SAGE_Brain_medulloblastoma_B_98-04-P1173257016   
SAGE_Brain_normal_cortex_B_BB5429423336   
SAGE_Brain_oligodendroglioma_B_10013244216   
SAGE_Breast_carcinoma_CL_MCF7estradiol_10H6072526   
SAGE_Breast_carcinoma_CL_MCF7estradiol_3h6016226   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC96353926   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC86652026   
SAGE_Breast_phyllodes_tumor_fibroblasts_AP_0702025957526   
SAGE_Cartilage_chondrosarcoma_grade_2_B_UIGA09384636   
SAGE_Lung_normal_CL_L162898316   
SAGE_Lymph_node_Lymphoma_B_hs020451789931586   
SAGE_Pancreas_carcinoma_CL_PL452955716   
SAGE_Placenta_normal_B_111808346   
SAGE_Retina_Peripheral_normal_B_15966126   
SAGE_Skin_Cancer_B_hs027957032981936   
SAGE_Skin_Normal_B_hs027158076861956   
SAGE_Stomach_adenocarcinoma_MD_HG79371436   
SAGE_Stomach_carcinoma_B_G1896307526   
SAGE_Uterus_Normal_B_hs019464526231946   
SAGE_Vascular_normal_CS_VEGF+5731626   
SAGE_Brain_astrocytoma_grade_III_B_58410300835   
SAGE_Brain_astrocytoma_grade_III_B_H105510988635   
SAGE_Brain_astrocytoma_grade_III_B_R92710734435   
SAGE_Brain_astrocytoma_grade_II_B_H12711448935   
SAGE_Brain_astrocytoma_grade_II_B_H53010243935   
SAGE_Brain_ependymoblastoma_B_8193397515   
SAGE_Brain_ependymoma_B_R3537382225   
SAGE_Brain_glioblastoma_B_H11106898625   
SAGE_Brain_glioblastoma_CL_stem_cells10841435   
SAGE_Brain_medulloblastoma_B_C6097461225   
SAGE_Brain_medulloblastoma_B_H2757231825   
SAGE_Brain_meningioma_grade_I_B_SF42716925325   
SAGE_Brain_normal_leptomeninges_B_AL27247325   
SAGE_Brain_normal_peds_cortex_B_H15717755425   
SAGE_Breast_Carcinoma_EPCR+_C5_IDC2737965681015   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC87396725   
SAGE_Breast_carcinoma_associated_stroma_B_IDC76802425   
SAGE_Embryo_Pre-Cancer_B_hs032468930161755   
SAGE_Prostate_carcinoma_CL_PC3_Mock3881915   
SAGE_Prostate_normal_epithelium_CS_confluent7189725   
SAGE_Retinal_Pigment_Epithelium_normal_B_4MacRPE7726225   
SAGE_Skin_normal_B_NS3661515   
SAGE_Stomach_carcinoma_B_xenograft_X1016974925   
SAGE_Testis_Embryonal_Carcinoma_CL_hs021359354901695   
SAGE_Bladder_Cancer_B_hs02664244612894   
SAGE_Brain_astrocytoma_grade_III_B_H2729605924   
SAGE_Brain_medulloblastoma_B_98-04-P4944306814   
SAGE_Brain_medulloblastoma_B_98-05-P0408925824   
SAGE_Brain_medulloblastoma_B_98-09-P5588598424   
SAGE_Brain_medulloblastoma_CL_H3414392014   
SAGE_Brain_meningioma_grade_II_B_SF21764871114   
SAGE_Brain_normal_substantia_nigra_B_14177314   
SAGE_Breast_carcinoma_CL_MDA435H244663114   
SAGE_Breast_carcinoma_associated_myoepithelium_CD10+_AP_DCIS68145224   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIFK08594424   
SAGE_Eye_Retinoblastoma_B_hs0389124342322914   
SAGE_GallBladder_Adenocarcinoma_B_C018138024   
SAGE_Peripheral_Blood_Cancer_B_hs042957568481434   
SAGE_Peripheral_Blood_Cancer_B_hs043063997051344   
SAGE_Prostate_carcinoma_CL_PC3_AS24076814   
SAGE_Retina_Retinoblastoma_B_18849024   
SAGE_Rheumatoid_arthritis_synovial_fibroblast_CS4247214   
SAGE_Skin_Normal_B_hs027243975501084   
SAGE_Skin_Normal_B_hs028165170891374   
SAGE_Stomach_adenocarcinoma_MD_G3294680214   
SAGE_Stomach_normal_MD_13S4590814   
SAGE_Thyroid_follicular_carcinoma_B_TT00412466434   
SAGE_Brain_astrocytoma_grade_II_B_H51811602223   
SAGE_Brain_glioblastoma_B_GBM10625976213   
SAGE_Brain_normal_cortex_B_pool66245113   
SAGE_Breast_Normal_Epithelium_CD44+_N6_N481048765193   
SAGE_Breast_Normal_Epithelium_CD44+_N7_N58110078641713   
SAGE_Breast_carcinoma_B_IDC-46409513   
SAGE_Breast_carcinoma_B_IDC-56045113   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS-35740213   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC96593513   
SAGE_Breast_carcinoma_epithelium_PROCR+_AP_IDC295408013   
SAGE_Breast_metastatic_carcinoma_B_LN26034313   
SAGE_Breast_normal_epithelium_BEREP4+_AP_N25051213   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N15722213   
SAGE_Breast_normal_myoepithelium_CL_HME505551613   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGD010986223   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGP010831923   
SAGE_Muscle_Rhabdomyosarcoma_B_16127013   
SAGE_Placenta_hydatidiform_mole_B_110167723   
SAGE_Retina_Peripheral_normal_B_4Peri12669123   
SAGE_Retina_macula_normal_B_HMAC210241723   
SAGE_Retina_normal_B_4cRet10370123   
SAGE_Stomach_carcinoma_B_xenograph_X435162013   
SAGE_Thyroid_follicular_adenoma_B_TT00510157823   
SAGE_Universal_reference_human_RNA_CL5172913   
SAGE_Vascular_endothelium_breast_carcinoma_associated_P1H12+_AP_DCIS66531413   
SAGE_White_Blood_Cells_lung_macrophage_normal_AP_L15187213   
SAGE_Brain_astrocytoma_grade_I_B_H10437592212   
SAGE_Brain_ependymoma_B_R5108407312   
SAGE_Brain_medulloblastoma_B_97-05-P0156997112   
SAGE_Breast_Normal_Epithelium_CD24+_N4_N481802274202   
SAGE_Breast_carcinoma_B_95-3476707012   
SAGE_Breast_normal_epithelium_CD44+_AP_N58046412   
SAGE_Breast_normal_stroma_AP_17915212   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES115173522   
SAGE_Embryonic_stem_cell_normal_CL_hs02383636083432   
SAGE_GallBladder_Adenocarcinoma_B_HAIIb6698812   
SAGE_Lymph_Node_normal_B_19942612   
SAGE_Prostate_normal_epithelium_CS_senescent7171712   
SAGE_Skin_Melanoma_B_hs02743895211392   
SAGE_Stomach_normal_MD_14S7335312   
SAGE_Vein_normal_B_hs02306755622842   
SAGE_Bladder_Cancer_B_hs02413335801241   
SAGE_Brain_astrocytoma_grade_III_B_34310015811   
SAGE_Brain_astrocytoma_grade_II_B_H35910576411   
SAGE_Brain_glioblastoma_B_H135312480511   
SAGE_Brain_glioblastoma_B_R2010105311   
SAGE_Brain_glioblastoma_B_R33610232211   
SAGE_Breast_Carcinoma_CD24+_C4_IDC403570910291   
SAGE_Breast_Carcinoma_SSEA4+_C7_IDC403381240291   
SAGE_Breast_Normal_Epithelium_CD24+_N1_N339646880611   
SAGE_Breast_Normal_Epithelium_CD24+_N2_N3513584223741   
SAGE_Breast_Normal_Epithelium_CD24+_N3_N473036002191   
SAGE_Skin_Cancer_B_hs02803618498201   
SAGE_Skin_Cancer_B_hs02843892507291   
SAGE_Skin_Melanoma_B_hs02733881770341   
SAGE_Skin_Melanoma_B_hs02754128221321   
SAGE_Skin_Normal_B_hs02775269789381   
SAGE_Skin_Normal_B_hs02783042221161   
SAGE_Skin_Normal_B_hs02824411636391   
SAGE_Testis_Embryonal_Carcinoma_CL_hs02126370161451   
SAGE_Thyroid_normal_B_00111593811   
SAGE_Urothelium_normal_B_hs02393114307161   
SAGE_Vein_normal_B_hs02376135688411   
SAGE_Breast_Normal_Epithelium_CD44+_N5_N47189093890   
SAGE_Foreskin_normal_B_hs03053940350140   
SAGE_Lymph_node_Lymphoma_B_hs01964791481190   
SAGE_Skin_Cancer_B_hs02833692239150