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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Digital Northern Results

Search query: CTGAGCAAGG

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Tags per 200,000 <2 <4 <8 <16 <32 <64 <128 <256 <512 >512

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SAGE_Breast_carcinoma_CL_ZR75_1_tamoxifen40052629   
SAGE_Lung_adenocarcinoma_B_136256527   
SAGE_Breast_carcinoma_CL_ZR75_1_estrogen38797315   
SAGE_Prostate_carcinoma_CL_LNCaP-C40029314   
SAGE_Breast_metastatic_carcinoma_B_LN260343413   
SAGE_Lung_normal_CL_L1628983213   
SAGE_Breast_carcinoma_CL_ZR75_1_untreated32303212   
SAGE_Embryonic_stem_cell_H7_normal_p33_CL_SHE132724651410   
SAGE_Brain_glioblastoma_control_CL_H2476042839   
SAGE_Breast_carcinoma_B_DCIS-54309829   
SAGE_Breast_carcinoma_B_IDC-46409539   
SAGE_Breast_carcinoma_CL_MDA435H484032329   
SAGE_Colon_adenocarcinoma_CL_Caco26068239   
SAGE_Ovary_carcinoma_CL_A27802136919   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES2401432178   
SAGE_Kidney_embryonic_CL_293+beta-catenin2351918   
SAGE_Prostate_normal_epithelium_CS_senescent7171738   
SAGE_Stomach_adenocarcinoma_MD_G3294680228   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGP010831947   
SAGE_Colon_carcinoma_CL_Hct116_wildtype_p53_Normal_Oxygen8039837   
SAGE_Embryonic_stem_cell_HES4_normal_p36_CL_SHE1120923287   
SAGE_Brain_meningioma_grade_III_B_SF23665978626   
SAGE_Brain_oligodendroglioma_B_10013244216   
SAGE_Breast_carcinoma_CL_MCF7estradiol_3h6016226   
SAGE_Embryonic_stem_cell_BG01_normal_p20_CL_SHE1920166876   
SAGE_Embryonic_stem_cell_HES3_normal_p16_CL_SHE1020535376   
SAGE_Lung_tumor_associated_chronic_inflammation_B_UIHM09896236   
SAGE_Ovary_carcinoma_CL_ES2-13115916   
SAGE_Pancreas_adenocarcinoma_B_96-62523321316   
SAGE_Pancreas_normal_CS_H1263222316   
SAGE_Pancreas_normal_CS_HX3198516   
SAGE_Prostate_carcinoma_CL_LNCaP6025026   
SAGE_Prostate_normal_B_26405826   
SAGE_Stomach_adenocarcinoma_B_G2346492526   
SAGE_Stomach_adenocarcinoma_MD_HG79371436   
SAGE_Testis_Embyronal_Carcinoma_B_16635226   
SAGE_Brain_astrocytoma_grade_III_B_43910782435   
SAGE_Brain_ependymoblastoma_B_8193397515   
SAGE_Brain_glioblastoma_CL_H54+LacZ6690825   
SAGE_Brain_medulloblastoma_B_12733861415   
SAGE_Brain_normal_peds_cortex_B_H15717755425   
SAGE_Breast_Carcinoma_EPCR+_C6_IDC3142087551105   
SAGE_Breast_Normal_Epithelium_CD24+_N2_N35135842233485   
SAGE_Breast_Normal_Epithelium_CD24+_N4_N481802274465   
SAGE_Breast_carcinoma_B_95-2593936415   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS67285725   
SAGE_Breast_normal_FS_NER3456515   
SAGE_Breast_normal_epithelium_CD24+_AP_N57646925   
SAGE_Breast_normal_epithelium_MUC1+_AP_N57622725   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Anoxia7905325   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Normal_Oxygen7928425   
SAGE_Colon_carcinoma_CL_Hct116_wildtype_p53_Anoxia7901525   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES115173545   
SAGE_GallBladder_Adenocarcinoma_B_NAM017854825   
SAGE_Brain_Medulloblastoma_CL_425Otx2siRNA9729124   
SAGE_Brain_ependymoma_B_2394665314   
SAGE_Brain_glioblastoma_B_H13714933814   
SAGE_Brain_glioblastoma_B_R709909924   
SAGE_Brain_medulloblastoma_B_98-04-P4944306814   
SAGE_Brain_meningioma_grade_II_B_SF21764871114   
SAGE_Brain_meningioma_grade_II_B_SF36224485714   
SAGE_Breast_Normal_Epithelium_CD24+_N1_N3396468802284   
SAGE_Breast_Normal_Epithelium_CD44+_N7_N58110078642354   
SAGE_Breast_carcinoma_metastasis_B_24979414   
SAGE_Breast_normal_epithelium_BEREP4+_AP_N14872914   
SAGE_Breast_normal_epithelium_CD24+_AP_N154143014   
SAGE_Colon_adenocarcinoma_B_Tu984137114   
SAGE_Colon_normal_B_NC24847914   
SAGE_GallBladder_Normal_B_HN8570624   
SAGE_Kidney_normal_B_14099314   
SAGE_Lymph_Node_normal_B_19942624   
SAGE_Ovary_normal_CL_IOSE29EC-114715914   
SAGE_Prostate_carcinoma_CL_PC3_AS24076814   
SAGE_Retinal_Pigment_Epithelium_normal_B_4PeriRPE9019924   
SAGE_Brain_glioblastoma_CL_H54+EGFRvIII5698213   
SAGE_Brain_normal_cortex_B_pool66245113   
SAGE_Breast_Carcinoma_CD24+_C1_IDC314286604673   
SAGE_Breast_Carcinoma_CD24+_C2_IDC344720960893   
SAGE_Breast_carcinoma_B_IDC-56045113   
SAGE_Breast_carcinoma_CL_MCF7control_0h5987713   
SAGE_Breast_carcinoma_CL_MCF7estradiol_10H6072513   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC96353913   
SAGE_Breast_carcinoma_associated_stroma_B_DCIS65704913   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC86652013   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC96593513   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_IDC285795613   
SAGE_Breast_carcinoma_epithelium_CD44+_AP_ASC35247813   
SAGE_Breast_carcinoma_epithelium_PROCR+_AP_IDC295408013   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N15722213   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N156399413   
SAGE_Breast_normal_stroma_B_IDC85048513   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGD010986223   
SAGE_Embryonic_stem_cell_H13_normal_p22_CL_SHE1522110143   
SAGE_Embryonic_stem_cell_H14_normal_p22_CL_SHE1421217043   
SAGE_Embryonic_stem_cell_HSF6_normal_p50_CL_SHES922448843   
SAGE_Liver_cholangiocarcinoma_CL_K35484213   
SAGE_Liver_normal_B_16630813   
SAGE_Muscle_Rhabdomyosarcoma_B_16127013   
SAGE_Muscle_normal_B_old5388913   
SAGE_Ovary_cystadenoma_CL_ML10-105514413   
SAGE_Peripheral_Blood_Cancer_B_hs04295756848953   
SAGE_Prostate_carcinoma_CL_LNCaP_no-DHT6216013   
SAGE_Retina_Pigment_epithelium_normal_B_15366613   
SAGE_Stomach_adenocarcinoma_MD_HS295883113   
SAGE_Thyroid_follicular_adenoma_B_TT00510157823   
SAGE_Vascular_normal_CS_VEGF+5731613   
SAGE_Vascular_normal_CS_control5164213   
SAGE_White_Blood_Cells_monocyte_normal_AP_P110115823   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P25029713   
SAGE_Bone_marrow_normal_AP_CD34+/CD38-/lin-8639112   
SAGE_Brain_medulloblastoma_B_H8766740412   
SAGE_Breast_Carcinoma_CD24+_C3_IDC384117410452   
SAGE_Breast_Carcinoma_CD24+_C4_IDC403570910482   
SAGE_Breast_Carcinoma_SSEA4+_C7_IDC403381240402   
SAGE_Breast_Normal_Epithelium_CD24+_N3_N473036002322   
SAGE_Breast_Normal_Epithelium_CD44+_N5_N471890938192   
SAGE_Breast_carcinoma_B_IDC-36889112   
SAGE_Breast_carcinoma_associated_myoepithelium_CD10+_AP_DCIS68145212   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS78918412   
SAGE_Breast_normal_epithelium_MUC1+_AP_N157170412   
SAGE_Cartilage_chondrosarcoma_grade_2_B_UIGA09384612   
SAGE_Cartilage_chondrosarcoma_grade_2_CL_UIGE07775712   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIFK08594412   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGX08843912   
SAGE_Embryonic_stem_cell_H1_normal_p31_CL_SHE1727620342   
SAGE_Esophagus_Dysplasia_B_LGD017490412   
SAGE_GallBladder_Adenocarcinoma_B_HAIIb6698812   
SAGE_Heart_normal_B_18306312   
SAGE_Ovary_endometriosis_CL_E127609712   
SAGE_Pelvis_mixoid_chondrosarcoma_grade2_B_UIHT08357712   
SAGE_Placenta_first_trimester_normal_B_18926512   
SAGE_Prostate_normal_epithelium_CS_confluent7189712   
SAGE_Retina_Retinoblastoma_B_18849012   
SAGE_Retinal_Pigment_Epithelium_normal_B_4MacRPE7726212   
SAGE_Skin_Normal_B_hs02824411636502   
SAGE_Stomach_carcinoma_B_xenograft_X1016974912   
SAGE_Testis_Embryonal_Carcinoma_CL_hs02135935490842   
SAGE_Vascular_endothelium_normal_liver_associated_AP_NLEC17775912   
SAGE_White_Blood_Cells_monocyte_normal_AP_A19991312   
SAGE_Bladder_Cancer_B_hs02413335801201   
SAGE_Bladder_Cancer_B_hs02645833968351   
SAGE_Bladder_Cancer_B_hs02654640198261   
SAGE_Brain_astrocytoma_grade_III_B_R92710734411   
SAGE_Brain_astrocytoma_grade_II_B_H51811602211   
SAGE_Brain_ependymoma_B_R102312269011   
SAGE_Brain_glioblastoma_B_H135312480511   
SAGE_Brain_glioblastoma_CL_4d11521211   
SAGE_Breast_Carcinoma_EPCR+_C5_IDC273796568221   
SAGE_Embryonic_stem_cell_H1_normal_p54_CL_SHE1621821421   
SAGE_Kidney_carcinoma_B_D210028111   
SAGE_Lymph_node_Lymphoma_B_hs02045178993461   
SAGE_Peripheral_Blood_Cancer_B_hs04306399705371   
SAGE_Placenta_normal_B_111808311   
SAGE_Retina_Peripheral_normal_B_4Peri12669111   
SAGE_Skin_Melanoma_B_hs02765631800301   
SAGE_Skin_Normal_B_hs02775269789411   
SAGE_Skin_Normal_B_hs02783042221161   
SAGE_Thyroid_follicular_carcinoma_B_TT00412466411   
SAGE_Vein_normal_B_hs02306755622641   
SAGE_Vein_normal_B_hs02376135688431   
SAGE_Bladder_Cancer_B_hs0240621642650   
SAGE_Bladder_Cancer_B_hs0266424461270   
SAGE_Bone_Marrow_Normal_FS_hs0404484254720   
SAGE_Brain_fetal_normal_B_S130554610   
SAGE_Breast_Normal_Epithelium_CD44+_N6_N48104876530   
SAGE_Embryo_Pre-Cancer_B_hs03246893016130   
SAGE_Eye_Retinoblastoma_B_hs038912434232190   
SAGE_Foreskin_normal_B_hs03053940350160   
SAGE_Lymph_node_Lymphoma_B_hs0196479148180   
SAGE_Skin_Cancer_B_hs0279570329850   
SAGE_Skin_Cancer_B_hs0280361849860   
SAGE_Skin_Cancer_B_hs0283369223990   
SAGE_Skin_Cancer_B_hs0284389250790   
SAGE_Skin_Melanoma_B_hs0273388177070   
SAGE_Skin_Melanoma_B_hs0274389521130   
SAGE_Skin_Normal_B_hs0271580768630   
SAGE_Skin_Normal_B_hs02724397550160   
SAGE_Skin_Normal_B_hs0281651708960   
SAGE_Testis_Embryonal_Carcinoma_CL_hs02126370161290   
SAGE_Uterus_Normal_B_hs01946452623250   
SAGE_Uterus_normal_B_hs0195371846390