Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
SAGE Genie
  • Human SAGE Genie Tools
  • Downloads
  • Digital Karyotyping
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Digital Northern Results

Search query: CTGACTTTCT

Color Code                              
Tags per 200,000 <2 <4 <8 <16 <32 <64 <128 <256 <512 >512

LibraryTotal Tags
in Library
Tag CountsTags per
200,000
Color
Code
SAGE_Prostate_adenocarcinoma_CL_LNCaP22344217   
SAGE_Breast_phyllodes_tumor_fibroblasts_AP_07020259575413   
SAGE_Brain_ependymoma_B_23946653312   
SAGE_Brain_glioblastoma_CS_TA246678312   
SAGE_Breast_carcinoma_B_IDC-464095412   
SAGE_Placenta_hydatidiform_mole_B_1101677611   
SAGE_Lymph_Node_normal_B_199426510   
SAGE_Prostate_carcinoma_CL_PC3_Mock38819210   
SAGE_Spinal_cord_normal_B_154785310   
SAGE_Brain_medulloblastoma_B_98-04-P4944306829   
SAGE_Prostate_carcinoma_B_pool26603439   
SAGE_Prostate_carcinoma_CL_LNCaP-T4354229   
SAGE_Retina_Retinoblastoma_B_18849049   
SAGE_Stomach_carcinoma_B_G1896307539   
SAGE_Vascular_endothelium_breast_carcinoma_associated_P1H12+_AP_DCIS66531439   
SAGE_White_Blood_Cells_breast_carcinoma_associated_CD45+_AP_DCIS66617639   
SAGE_Brain_ependymoma_B_R3537382238   
SAGE_Brain_medulloblastoma_B_97-05-P0156997138   
SAGE_Brain_meningioma_grade_II_B_SF21764871128   
SAGE_Kidney_embryonic_CL_293+beta-catenin2351918   
SAGE_Liver_cholangiocarcinoma_B_K2D4685328   
SAGE_Pancreas_adenocarcinoma_CL_Panc12474918   
SAGE_Brain_ependymoma_B_R4555182527   
SAGE_Brain_glioblastoma_B_pooled5642827   
SAGE_Brain_medulloblastoma_B_96-04-P0195264527   
SAGE_Brain_normal_peds_cortex_B_H15717755437   
SAGE_Colon_adenocarcinoma_B_Tu1025570027   
SAGE_Colon_adenocarcinoma_CL_RKO5129427   
SAGE_Liver_cholangiocarcinoma_CL_K35484227   
SAGE_Ovary_cystadenoma_CL_ML10-105514427   
SAGE_Vascular_endothelium_normal_breast_associated_P1H12+_AP_15702327   
SAGE_Vascular_normal_CS_control5164227   
SAGE_White_Blood_Cells_monocyte_depleted_mononuclear_cells_normal_AP_P15163427   
SAGE_Brain_glioblastoma_B_R709909936   
SAGE_Brain_medulloblastoma_B_98-09-P5588598436   
SAGE_Brain_medulloblastoma_B_H13225949826   
SAGE_Brain_medulloblastoma_CL_4-HCR6659926   
SAGE_Brain_normal_cortex_B_pool66245126   
SAGE_Breast_carcinoma_B_IDC-56045126   
SAGE_Breast_carcinoma_CL_MCF7estradiol_3h6016226   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES115173556   
SAGE_Lung_normal_CL_L162898316   
SAGE_Pancreas_adenocarcinoma_B_96-62523321316   
SAGE_Prostate_normal_B_26405826   
SAGE_Stomach_adenocarcinoma_MD_HS295883126   
SAGE_White_Blood_Cells_normal_breast_associated_CD45+_AP3198516   
SAGE_Bone_marrow_normal_B_D013657715   
SAGE_Brain_astrocytoma_grade_II_B_H35910576435   
SAGE_Brain_medulloblastoma_B_12733861415   
SAGE_Brain_medulloblastoma_B_C6097461225   
SAGE_Brain_medulloblastoma_B_DL76839225   
SAGE_Brain_medulloblastoma_B_H8766740425   
SAGE_Breast_carcinoma_B_95-2593936415   
SAGE_Breast_carcinoma_MD_LCIS6783425   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIEK03774715   
SAGE_Esophagus_Dysplasia_B_HGD027861125   
SAGE_Lung_adenocarcinoma_B_13625615   
SAGE_Lung_adenocarcinoma_MD_L93591615   
SAGE_Lymph_Node_Lymphoma_B_17200825   
SAGE_Ovary_endometriosis_CL_E127609725   
SAGE_Retina_Macula_normal_B_4Mac10141735   
SAGE_Vascular_endothelium_hemangioma_B_1467568025   
SAGE_Brain_Medulloblastoma_CL_UW228-N9493724   
SAGE_Brain_medulloblastoma_B_98-05-P0408925824   
SAGE_Brain_meningioma_grade_II_B_SF36224485714   
SAGE_Breast_carcinoma_B_DCIS-54309814   
SAGE_Breast_carcinoma_CL_MDA435C4727014   
SAGE_Breast_carcinoma_CL_MDA435H244663114   
SAGE_Breast_normal_epithelium_CD24+_AP_N154143014   
SAGE_Breast_normal_epithelium_CD24+_AP_N24155114   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIFK08594424   
SAGE_GallBladder_Normal_B_HN8570624   
SAGE_Kidney_embryonic_CL_293-control4195514   
SAGE_Leukocytes_normal_B_14787314   
SAGE_Ovary_normal_CL_IOSE29EC-114715914   
SAGE_Retina_Peripheral_normal_B_4Peri12669134   
SAGE_Skin_melanoma_B_DB24133814   
SAGE_Stomach_adenocarcinoma_MD_G3294680214   
SAGE_Stomach_adenocarcinoma_MD_HG79371424   
SAGE_Bone_Marrow_AML_FS_CD34+CD38+6151913   
SAGE_Brain_Medulloblastoma_CL_425C26264213   
SAGE_Brain_astrocytoma_grade_III_B_H10205157313   
SAGE_Brain_astrocytoma_grade_III_B_R14011873323   
SAGE_Brain_astrocytoma_grade_III_B_R92710734423   
SAGE_Brain_astrocytoma_grade_II_B_H12711448923   
SAGE_Brain_astrocytoma_grade_II_B_H50112830923   
SAGE_Brain_ependymoma_B_11506237313   
SAGE_Brain_ependymoma_B_R102312269023   
SAGE_Brain_ependymoma_B_R5825218913   
SAGE_Brain_glioblastoma_CL_4d11521223   
SAGE_Brain_medulloblastoma_CL_D2836631613   
SAGE_Brain_meningioma_grade_I_B_SF44655464713   
SAGE_Breast_carcinoma_CL_MCF7estradiol_10H6072513   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS-26616813   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC86652013   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_IDC285795613   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_PE25013213   
SAGE_Breast_fibroadenoma_MD5568813   
SAGE_Breast_normal_epithelium_BEREP4+_AP_N25051213   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGD010986223   
SAGE_Colon_adenocarcinoma_CL_Caco26068213   
SAGE_Colon_adenocarcinoma_CL_HCT1165564113   
SAGE_Colon_adenocarcinoma_CL_SW8376114813   
SAGE_Embryonic_stem_cell_H13_normal_p22_CL_SHE1522110143   
SAGE_Embryonic_stem_cell_H1_normal_p31_CL_SHE1727620353   
SAGE_Embryonic_stem_cell_H1_normal_p54_CL_SHE1621821443   
SAGE_Liver_cholangiocarcinoma_B_K16031913   
SAGE_Liver_cholangiocarcinoma_CL_K45297313   
SAGE_Lymph_node_Lymphoma_B_hs02045178993913   
SAGE_Muscle_Rhabdomyosarcoma_B_16127013   
SAGE_Peritoneum_normal_B_135352713   
SAGE_Prostate_adenocarcinoma_MD_PR3176495113   
SAGE_Retina_Peripheral_normal_B_210531223   
SAGE_Retina_macula_normal_B_HMAC210241723   
SAGE_Thyroid_follicular_adenoma_B_TT00510157823   
SAGE_White_Blood_Cells_monocytes_normal_AP_P25442613   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P110287323   
SAGE_Bladder_Cancer_B_hs02645833968722   
SAGE_Brain_Medulloblastoma_CL_425Otx2siRNA9729112   
SAGE_Brain_Medulloblastoma_CL_UW228-V28082712   
SAGE_Brain_astrocytoma_grade_III_B_8289993912   
SAGE_Brain_ependymoma_B_R5108407312   
SAGE_Brain_ependymoma_B_R5127537912   
SAGE_Brain_fetal_normal_B_S130554642   
SAGE_Brain_glioblastoma_B_H1425C8899012   
SAGE_Brain_glioblastoma_CL_H54+LacZ6690812   
SAGE_Brain_medulloblastoma_B_H9728537612   
SAGE_Brain_meningioma_grade_I_B_SF42716925312   
SAGE_Breast_Carcinoma_CD24+_C1_IDC314286604552   
SAGE_Breast_Carcinoma_CD24+_C4_IDC403570910452   
SAGE_Breast_carcinoma_B_95-3476707012   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS67285712   
SAGE_Embryonic_stem_cell_H14_normal_p22_CL_SHE1421217032   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES240143262   
SAGE_Esophagus_Dysplasia_B_LGD017490412   
SAGE_Eye_Retinoblastoma_B_hs0389124342321272   
SAGE_Lung_normal_B_18870812   
SAGE_Lung_tumor_associated_chronic_inflammation_B_UIHM09896212   
SAGE_Prostate_normal_epithelium_CS_senescent7171712   
SAGE_Stomach_normal_MD_14S7335312   
SAGE_Bladder_Cancer_B_hs02664244612231   
SAGE_Brain_astrocytoma_grade_III_B_40710831211   
SAGE_Brain_astrocytoma_grade_III_B_43910782411   
SAGE_Brain_astrocytoma_grade_III_B_H97010698211   
SAGE_Brain_astrocytoma_grade_II_B_H51610811611   
SAGE_Brain_astrocytoma_grade_II_B_H51811602211   
SAGE_Brain_astrocytoma_grade_II_B_H53010243911   
SAGE_Brain_ependymoma_B_R62812043111   
SAGE_Brain_glioblastoma_B_H83310060011   
SAGE_Brain_glioblastoma_CL_stem_cells10841411   
SAGE_Breast_Carcinoma_EPCR+_C6_IDC314208755331   
SAGE_Breast_Carcinoma_SSEA4+_C7_IDC403381240281   
SAGE_Embryonic_stem_cell_H7_normal_p33_CL_SHE1327246521   
SAGE_Kidney_carcinoma_B_D210028111   
SAGE_Lymph_node_Lymphoma_B_hs01964791481301   
SAGE_Peripheral_Blood_Cancer_B_hs04295756848411   
SAGE_Peripheral_Blood_Cancer_B_hs04306399705361   
SAGE_Retina_normal_B_4cRet10370111   
SAGE_Skin_Cancer_B_hs02795703298291   
SAGE_Thyroid_follicular_carcinoma_B_TT00412466411   
SAGE_Thyroid_normal_B_00111593811   
SAGE_Uterus_Normal_B_hs01946452623631   
SAGE_Uterus_normal_B_hs01953718463261   
SAGE_Vein_normal_B_hs02376135688491   
SAGE_White_Blood_Cells_monocytes_normal_AP_C110165611   
SAGE_Bladder_Cancer_B_hs02406216426130   
SAGE_Bladder_Cancer_B_hs02654640198110   
SAGE_Bone_Marrow_Cancer_FS_hs04054900037140   
SAGE_Bone_Marrow_Normal_FS_hs0404484254720   
SAGE_Breast_Carcinoma_CD24+_C2_IDC344720960230   
SAGE_Breast_Carcinoma_CD24+_C3_IDC38411741080   
SAGE_Breast_Carcinoma_EPCR+_C5_IDC27379656830   
SAGE_Breast_Normal_Epithelium_CD24+_N1_N339646880110   
SAGE_Breast_Normal_Epithelium_CD24+_N2_N3513584223230   
SAGE_Breast_Normal_Epithelium_CD24+_N3_N47303600250   
SAGE_Breast_Normal_Epithelium_CD24+_N4_N48180227410   
SAGE_Breast_Normal_Epithelium_CD44+_N5_N47189093850   
SAGE_Breast_Normal_Epithelium_CD44+_N6_N48104876550   
SAGE_Breast_Normal_Epithelium_CD44+_N7_N5811007864380   
SAGE_Embryo_Pre-Cancer_B_hs0324689301660   
SAGE_Embryonic_stem_cell_BG01_normal_p20_CL_SHE1920166810   
SAGE_Embryonic_stem_cell_HES3_normal_p16_CL_SHE1020535310   
SAGE_Embryonic_stem_cell_normal_CL_hs0238363608320   
SAGE_Foreskin_normal_B_hs03053940350150   
SAGE_Skin_Cancer_B_hs02803618498100   
SAGE_Skin_Cancer_B_hs0283369223950   
SAGE_Skin_Cancer_B_hs0284389250780   
SAGE_Skin_Melanoma_B_hs0273388177060   
SAGE_Skin_Melanoma_B_hs0274389521120   
SAGE_Skin_Melanoma_B_hs02754128221200   
SAGE_Skin_Melanoma_B_hs02765631800250   
SAGE_Skin_Normal_B_hs02715807686150   
SAGE_Skin_Normal_B_hs02724397550100   
SAGE_Skin_Normal_B_hs02775269789220   
SAGE_Skin_Normal_B_hs0278304222150   
SAGE_Skin_Normal_B_hs0281651708960   
SAGE_Testis_Embryonal_Carcinoma_CL_hs02126370161280   
SAGE_Testis_Embryonal_Carcinoma_CL_hs02135935490260   
SAGE_Urothelium_normal_B_hs0239311430720   
SAGE_Vein_normal_B_hs02306755622100