Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
SAGE Genie
  • Human SAGE Genie Tools
  • Downloads
  • Digital Karyotyping
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Digital Northern Results

Search query: CTGAAACAGC

Color Code                              
Tags per 200,000 <2 <4 <8 <16 <32 <64 <128 <256 <512 >512

LibraryTotal Tags
in Library
Tag CountsTags per
200,000
Color
Code
SAGE_Prostate_carcinoma_CL_PC3_AS240768524   
SAGE_Prostate_carcinoma_CL_PC3_Mock38819420   
SAGE_Breast_normal_epithelium_CD24+_AP_N1541430419   
SAGE_Breast_carcinoma_B_95-34767070617   
SAGE_Brain_Medulloblastoma_CL_UW228-N94937714   
SAGE_Brain_medulloblastoma_B_98-04-P11732570212   
SAGE_Breast_carcinoma_B_IDC-464095412   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGP0108319611   
SAGE_Brain_astrocytoma_grade_II_B_H501128309710   
SAGE_Colon_adenocarcinoma_CL_HCT11655641310   
SAGE_Vascular_endothelium_hemangioma_B_14675680410   
SAGE_Bone_marrow_normal_AP_CD34+/CD38-/lin-8639149   
SAGE_Breast_metastatic_carcinoma_B_LN26034339   
SAGE_Colon_adenocarcinoma_CL_SW8376114839   
SAGE_Brain_astrocytoma_grade_III_B_8289993948   
SAGE_Brain_ependymoma_B_2394665328   
SAGE_Brain_glioblastoma_CL_H54+LacZ6690838   
SAGE_Brain_medulloblastoma_B_98-05-P6084845128   
SAGE_Breast_metastatic_carcinoma_B_LN14508728   
SAGE_Cartilage_chondrosarcoma_grade_2_B_UIGA09384648   
SAGE_Kidney_embryonic_CL_293+beta-catenin2351918   
SAGE_Ovary_normal_CS_HOSE_44772828   
SAGE_Stomach_normal_MD_13S4590828   
SAGE_Brain_astrocytoma_grade_II_B_H35910576447   
SAGE_Brain_astrocytoma_grade_II_B_H51610811647   
SAGE_Brain_medulloblastoma_B_96-04-P0195264527   
SAGE_Breast_Carcinoma_CD24+_C4_IDC4035709101267   
SAGE_Breast_normal_myoepithelium_CL_HME505551627   
SAGE_GallBladder_Adenocarcinoma_B_C018138037   
SAGE_Ovary_adenocarcinoma_B_OVT-75351427   
SAGE_Stomach_carcinoma_B_xenograph_X435162027   
SAGE_White_Blood_Cells_monocyte_depleted_mononuclear_cells_normal_AP_P15163427   
SAGE_Brain_medulloblastoma_B_H13225949826   
SAGE_Brain_medulloblastoma_B_H3066045426   
SAGE_Brain_medulloblastoma_B_H4845746926   
SAGE_Brain_medulloblastoma_CL_4-HCR6659926   
SAGE_Breast_Carcinoma_CD24+_C2_IDC3447209601546   
SAGE_Breast_carcinoma_B_IDC-56045126   
SAGE_Breast_carcinoma_CL_MCF7estradiol_10H6072526   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS-26616826   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N15722226   
SAGE_Eye_lens_B_UIHI08589836   
SAGE_Lung_normal_CL_L162898316   
SAGE_Pancreas_normal_CS_H1263222316   
SAGE_Pancreas_normal_CS_HX3198516   
SAGE_Prostate_carcinoma_CL_A+3029816   
SAGE_Prostate_carcinoma_CL_LNCaP_no-DHT6216026   
SAGE_Prostate_normal_MD_PR3175927726   
SAGE_Stomach_carcinoma_B_G1896307526   
SAGE_White_Blood_Cells_normal_breast_associated_CD45+_AP3198516   
SAGE_Brain_astrocytoma_grade_III_B_R14011873335   
SAGE_Brain_ependymoma_B_R3537382225   
SAGE_Brain_fetal_normal_B_S130554685   
SAGE_Brain_glioblastoma_B_R33610232235   
SAGE_Brain_medulloblastoma_B_97-05-P3127429525   
SAGE_Brain_normal_peds_cortex_B_H15717755425   
SAGE_Breast_carcinoma_B_95-2593936415   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS67285725   
SAGE_Breast_normal_FS_NER3456515   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES115173545   
SAGE_Pancreas_adenocarcinoma_CL_CAPAN13767415   
SAGE_Retina_Macula_normal_B_4Mac10141735   
SAGE_Bone_marrow_normal_AP_CD34+/CD38+/lin+8159524   
SAGE_Brain_Medulloblastoma_CL_425Otx2siRNA9729124   
SAGE_Brain_Medulloblastoma_CL_UW228-V28082724   
SAGE_Brain_astrocytoma_grade_II_B_H5638856824   
SAGE_Brain_ependymoma_B_R5108407324   
SAGE_Brain_medulloblastoma_CL_H3414392014   
SAGE_Brain_medulloblastoma_CL_mhh-14785814   
SAGE_Brain_meningioma_grade_II_B_SF21764871114   
SAGE_Breast_carcinoma_B_DCIS-54309814   
SAGE_Breast_carcinoma_CL_MDA435C4727014   
SAGE_Breast_carcinoma_MD_DCIS4078314   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGX08843924   
SAGE_Colon_normal_B_NC14961014   
SAGE_Kidney_embryonic_CL_293-control4195514   
SAGE_Lung_adenocarcinoma_MD_L108688724   
SAGE_Lung_tumor_associated_chronic_inflammation_B_UIHM09896224   
SAGE_Ovary_adenocarcinoma_B_OVT-64144314   
SAGE_Rheumatoid_arthritis_synovial_fibroblast_CS4247214   
SAGE_Stomach_adenocarcinoma_MD_G3294680214   
SAGE_Uterus_normal_B_hs01953718463774   
SAGE_Brain_astrocytoma_grade_III_B_43910782423   
SAGE_Brain_astrocytoma_grade_III_B_58410300823   
SAGE_Brain_astrocytoma_grade_III_B_H10205157313   
SAGE_Brain_astrocytoma_grade_III_B_H105510988623   
SAGE_Brain_astrocytoma_grade_III_B_H97010698223   
SAGE_Brain_ependymoma_B_R4555182513   
SAGE_Brain_ependymoma_B_R62812043123   
SAGE_Brain_glioblastoma_B_H135312480523   
SAGE_Brain_glioblastoma_CL_28d11062423   
SAGE_Brain_glioblastoma_CL_4d11521223   
SAGE_Brain_glioblastoma_CL_stem_cells10841423   
SAGE_Brain_medulloblastoma_CL_D2836631613   
SAGE_Breast_Carcinoma_SSEA4+_C7_IDC403381240573   
SAGE_Breast_carcinoma_CL_MCF7estradiol_3h6016213   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC76509113   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS-35740213   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_IDC285795613   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_PE25013213   
SAGE_Breast_normal_B_gestational hyperplasia16170413   
SAGE_Breast_normal_stroma_B_IDC85048513   
SAGE_Colon_adenocarcinoma_CL_Caco26068213   
SAGE_Colon_adenocarcinoma_CL_RKO5129413   
SAGE_Kidney_carcinoma_B_D210028123   
SAGE_Liver_cholangiocarcinoma_CL_K35484213   
SAGE_Liver_cholangiocarcinoma_CL_K45297313   
SAGE_Liver_normal_B_16630813   
SAGE_Muscle_Rhabdomyosarcoma_B_16127013   
SAGE_Peritoneum_normal_B_135352713   
SAGE_Prostate_adenocarcinoma_MD_PR3176495113   
SAGE_Prostate_carcinoma_B_pool26603413   
SAGE_Prostate_carcinoma_CL_LNCaP6025013   
SAGE_Stomach_adenocarcinoma_MD_HS295883113   
SAGE_Universal_reference_human_RNA_CL5172913   
SAGE_Vascular_endothelium_breast_carcinoma_associated_P1H12+_AP_DCIS66531413   
SAGE_White_Blood_Cells_monocyte_depleted_mononuclear_cells_normal_AP_A15379513   
SAGE_White_Blood_Cells_monocytes_normal_AP_P25442613   
SAGE_Brain_astrocytoma_grade_III_B_H2729605912   
SAGE_Brain_ependymoma_B_H5806861412   
SAGE_Brain_ependymoma_B_R5127537912   
SAGE_Brain_glioblastoma_B_H1425C8899012   
SAGE_Brain_glioblastoma_B_R709909912   
SAGE_Brain_medulloblastoma_B_97-05-P0156997112   
SAGE_Brain_medulloblastoma_B_98-09-P5588598412   
SAGE_Brain_medulloblastoma_B_DL76839212   
SAGE_Brain_medulloblastoma_B_H8766740412   
SAGE_Brain_medulloblastoma_B_H9728537612   
SAGE_Breast_Carcinoma_CD24+_C3_IDC384117410512   
SAGE_Breast_carcinoma_B_IDC-36889112   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC87396712   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS78918412   
SAGE_Breast_carcinoma_epithelium_BerEP4+AP_IDC77341012   
SAGE_Breast_carcinoma_myoepithelium_X_ITGB6+_AP7878512   
SAGE_Breast_normal_epithelium_CD24+_AP_N57646912   
SAGE_Breast_normal_myoepithelium_CD10+_AP_IDC76900612   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N57617312   
SAGE_Cartilage_chondrosarcoma_grade_2_CL_UIFU07501912   
SAGE_Colon_carcinoma_CL_Hct116_wildtype_p53_Normal_Oxygen8039812   
SAGE_Embryonic_stem_cell_BG01_normal_p20_CL_SHE1920166832   
SAGE_Embryonic_stem_cell_H14_normal_p22_CL_SHE1421217032   
SAGE_Esophagus_Adenocarcinoma_B_CA1D7379312   
SAGE_Esophagus_Dysplasia_B_HGD027861112   
SAGE_Esophagus_Dysplasia_B_LGD017490412   
SAGE_GallBladder_Adenocarcinoma_B_HAIIb6698812   
SAGE_Lymph_Node_normal_B_19942612   
SAGE_Placenta_first_trimester_normal_B_18926512   
SAGE_Retina_Retinoblastoma_B_18849012   
SAGE_Stomach_adenocarcinoma_MD_HG79371412   
SAGE_Testis_Embryonal_Carcinoma_CL_hs02126370161712   
SAGE_Testis_Embryonal_Carcinoma_CL_hs02135935490712   
SAGE_Uterus_Normal_B_hs01946452623882   
SAGE_Vascular_endothelium_normal_liver_associated_AP_NLEC17775912   
SAGE_Bone_Marrow_Cancer_FS_hs04054900037391   
SAGE_Brain_astrocytoma_grade_III_B_34310015811   
SAGE_Brain_astrocytoma_grade_III_B_40710831211   
SAGE_Brain_astrocytoma_grade_II_B_H38810628511   
SAGE_Brain_ependymoma_B_R102312269011   
SAGE_Brain_glioblastoma_B_H83310060011   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGD010986211   
SAGE_Embryonic_stem_cell_H13_normal_p22_CL_SHE1522110121   
SAGE_Embryonic_stem_cell_H1_normal_p54_CL_SHE1621821421   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES240143241   
SAGE_Thyroid_follicular_adenoma_B_TT00510157811   
SAGE_Thyroid_follicular_carcinoma_B_TT00412466411   
SAGE_White_Blood_Cells_monocyte_normal_AP_P110115811   
SAGE_Bladder_Cancer_B_hs0240621642680   
SAGE_Bladder_Cancer_B_hs02645833968130   
SAGE_Bladder_Cancer_B_hs0265464019840   
SAGE_Bladder_Cancer_B_hs02664244612130   
SAGE_Bone_Marrow_Normal_FS_hs04044842547220   
SAGE_Breast_Carcinoma_CD24+_C1_IDC31428660450   
SAGE_Breast_Carcinoma_EPCR+_C5_IDC27379656820   
SAGE_Breast_Carcinoma_EPCR+_C6_IDC31420875530   
SAGE_Breast_Normal_Epithelium_CD24+_N1_N33964688010   
SAGE_Breast_Normal_Epithelium_CD24+_N2_N351358422350   
SAGE_Breast_Normal_Epithelium_CD24+_N4_N48180227420   
SAGE_Breast_Normal_Epithelium_CD44+_N7_N5811007864350   
SAGE_Embryonic_stem_cell_H1_normal_p31_CL_SHE1727620310   
SAGE_Embryonic_stem_cell_HES3_normal_p16_CL_SHE1020535310   
SAGE_Embryonic_stem_cell_HES4_normal_p36_CL_SHE1120923210   
SAGE_Embryonic_stem_cell_HSF6_normal_p50_CL_SHES922448810   
SAGE_Embryonic_stem_cell_normal_CL_hs0238363608360   
SAGE_Eye_Retinoblastoma_B_hs038912434232340   
SAGE_Foreskin_normal_B_hs03053940350130   
SAGE_Lymph_node_Lymphoma_B_hs01964791481180   
SAGE_Lymph_node_Lymphoma_B_hs02045178993220   
SAGE_Peripheral_Blood_Cancer_B_hs0429575684890   
SAGE_Peripheral_Blood_Cancer_B_hs04306399705130   
SAGE_Skin_Cancer_B_hs02795703298250   
SAGE_Skin_Cancer_B_hs02833692239110   
SAGE_Skin_Cancer_B_hs0284389250750   
SAGE_Skin_Melanoma_B_hs0273388177060   
SAGE_Skin_Melanoma_B_hs0274389521140   
SAGE_Skin_Melanoma_B_hs0275412822140   
SAGE_Skin_Melanoma_B_hs02765631800210   
SAGE_Skin_Normal_B_hs02715807686110   
SAGE_Skin_Normal_B_hs02724397550150   
SAGE_Skin_Normal_B_hs0277526978970   
SAGE_Skin_Normal_B_hs0278304222180   
SAGE_Urothelium_normal_B_hs0239311430790   
SAGE_Vein_normal_B_hs0230675562280   
SAGE_Vein_normal_B_hs02376135688210