Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
SAGE Genie
  • Human SAGE Genie Tools
  • Downloads
  • Digital Karyotyping
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Digital Northern Results

Search query: CCTGTAAAGC

Color Code                              
Tags per 200,000 <2 <4 <8 <16 <32 <64 <128 <256 <512 >512

LibraryTotal Tags
in Library
Tag CountsTags per
200,000
Color
Code
SAGE_Leukocytes_normal_B_1478732187   
SAGE_Breast_Carcinoma_CD24+_C3_IDC384117410115956   
SAGE_Lymph_node_Lymphoma_B_hs02045178993140954   
SAGE_Brain_meningioma_grade_II_B_SF3622448571149   
SAGE_Brain_ependymoma_B_1150623731548   
SAGE_Breast_normal_organoid_B581811448   
SAGE_Brain_ependymoma_B_R353738221643   
SAGE_Brain_glioblastoma_B_H8331006002243   
SAGE_Brain_medulloblastoma_B_98-05-P608484511041   
SAGE_Brain_ependymoma_B_R6281204312439   
SAGE_Brain_ependymoblastoma_B_81933975635   
SAGE_Brain_ependymoma_B_R510840731535   
SAGE_Brain_medulloblastoma_B_H876674041235   
SAGE_Breast_carcinoma_epithelium_CD24+_AP_IDC2639361735   
SAGE_Brain_astrocytoma_grade_III_B_H10551098861934   
SAGE_Brain_medulloblastoma_B_H484574691034   
SAGE_Breast_normal_myoepithelium_CD10+_AP_IDC7690061234   
SAGE_Brain_glioblastoma_B_H1425C889901533   
SAGE_Spinal_cord_normal_B_154785932   
SAGE_Brain_astrocytoma_grade_II_B_H5011283092031   
SAGE_Brain_ependymoma_B_R512753791231   
SAGE_Brain_ependymoma_B_R10231226901930   
SAGE_Brain_medulloblastoma_B_98-13-P30145342730   
SAGE_Brain_medulloblastoma_B_H972853761330   
SAGE_Brain_astrocytoma_grade_III_B_5841030081427   
SAGE_Brain_astrocytoma_grade_II_B_H1271144891627   
SAGE_Brain_medulloblastoma_B_98-04-P49443068627   
SAGE_Brain_medulloblastoma_B_H275723181027   
SAGE_Brain_medulloblastoma_B_96-04-P01952645726   
SAGE_Brain_medulloblastoma_B_C609746121026   
SAGE_Breast_Carcinoma_SSEA4+_C7_IDC40338124045026   
SAGE_Breast_carcinoma_MD_LCIS67834926   
SAGE_Brain_astrocytoma_grade_III_B_R1401187331525   
SAGE_Skin_Melanoma_B_hs0276563180071525   
SAGE_Brain_astrocytoma_grade_III_B_828999391224   
SAGE_Brain_medulloblastoma_B_98-04-P11732570424   
SAGE_Brain_medulloblastoma_B_98-05-P040892581124   
SAGE_Brain_astrocyte_normal_CL_NHA551481623   
SAGE_Breast_carcinoma_CL_MCF7estradiol_10H60725723   
SAGE_Bladder_Cancer_B_hs0265464019852422   
SAGE_Brain_astrocytoma_grade_II_B_H3591057641222   
SAGE_Breast_carcinoma_epithelium_CD44+_AP_PE252342622   
SAGE_Lung_normal_B_1887081022   
SAGE_Skin_Melanoma_B_hs0273388177043122   
SAGE_Liver_cholangiocarcinoma_CL_K354842621   
SAGE_Skin_Cancer_B_hs0279570329860421   
SAGE_Vascular_endothelium_hemangioma_B_14675680821   
SAGE_Brain_astrocytoma_grade_III_B_H272960591020   
SAGE_Brain_astrocytoma_grade_III_B_R9271073441120   
SAGE_Brain_astrocytoma_grade_II_B_H56388568920   
SAGE_Brain_medulloblastoma_B_H132259498620   
SAGE_Breast_carcinoma_B_95-25939364420   
SAGE_Breast_phyllodes_tumor_fibroblasts_AP_07020259575620   
SAGE_Brain_glioblastoma_B_R201010531019   
SAGE_Brain_medulloblastoma_B_H30660454619   
SAGE_Breast_normal_epithelium_CD24+_AP_N241551419   
SAGE_Skin_Melanoma_B_hs0274389521137819   
SAGE_Stomach_carcinoma_B_xenograph_X4351620519   
SAGE_Stomach_normal_MD_14S73353719   
SAGE_Thyroid_follicular_carcinoma_B_TT0041246641219   
SAGE_Universal_reference_human_RNA_CL51729519   
SAGE_Brain_meningioma_grade_I_B_SF446554647518   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC965935618   
SAGE_Ovary_cystadenoma_CL_ML10-1055144518   
SAGE_Breast_carcinoma_associated_stroma_B_DCIS657049517   
SAGE_Breast_carcinoma_associated_stroma_B_IDC768024617   
SAGE_Pancreas_adenocarcinoma_B_91-1611333582317   
SAGE_Placenta_first_trimester_normal_B_189265817   
SAGE_Brain_glioblastoma_B_GBM106259762516   
SAGE_Brain_glioblastoma_B_H13531248051016   
SAGE_Brain_glioblastoma_B_H137149338416   
SAGE_Brain_glioblastoma_B_R7099099816   
SAGE_Brain_normal_leptomeninges_B_AL272473616   
SAGE_Breast_metastatic_carcinoma_B_LN260343516   
SAGE_Colon_normal_B_NC149610416   
SAGE_Colon_normal_B_NC248479416   
SAGE_Placenta_normal_B_11180831016   
SAGE_Brain_astrocytoma_grade_II_B_H530102439815   
SAGE_Brain_ependymoma_B_R58252189415   
SAGE_Brain_medulloblastoma_B_127338614315   
SAGE_Brain_normal_cerebellum_B_150385415   
SAGE_Breast_Carcinoma_CD24+_C4_IDC40357091027215   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIEK037747315   
SAGE_Prostate_carcinoma_CL_PC3_Mock38819315   
SAGE_Stomach_adenocarcinoma_B_G23464925515   
SAGE_Thyroid_follicular_adenoma_B_TT005101578815   
SAGE_Uterus_Normal_B_hs0194645262348515   
SAGE_Vascular_endothelium_breast_carcinoma_associated_P1H12+_AP_DCIS665314515   
SAGE_White_Blood_Cells_breast_carcinoma_associated_CD45+_AP_DCIS666176515   
SAGE_Bladder_Cancer_B_hs0264583396841814   
SAGE_Brain_ependymoma_B_139456314414   
SAGE_Brain_medulloblastoma_B_97-05-P01569971514   
SAGE_Brain_oligodendroglioma_B_H98827864214   
SAGE_Skin_melanoma_B_DB241338314   
SAGE_Bladder_Cancer_B_hs0241333580121713   
SAGE_Brain_glioblastoma_B_R336102322713   
SAGE_Brain_medulloblastoma_B_98-09-P55885984613   
SAGE_Brain_meningioma_grade_III_B_SF236659786413   
SAGE_Breast_carcinoma_CL_MCF7control_0h59877413   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS-357402413   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS672857513   
SAGE_Breast_carcinoma_epithelium_BerEP4+AP_IDC773410513   
SAGE_Lung_normal_CL_L1628983213   
SAGE_Ovary_endometriosis_CL_E1276097513   
SAGE_Retina_Retinoblastoma_B_188490613   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P1102873713   
SAGE_Brain_Medulloblastoma_CL_UW228-N94937612   
SAGE_Brain_glioblastoma_CS_TA246678312   
SAGE_Brain_medulloblastoma_B_H141361853412   
SAGE_Brain_medulloblastoma_CL_mhh-147858312   
SAGE_Brain_meningioma_grade_II_B_SF217648711312   
SAGE_Breast_carcinoma_CL_MDA435H2446631312   
SAGE_Breast_normal_epithelium_BEREP4+_AP_N148729312   
SAGE_Breast_normal_stroma_AP_179152512   
SAGE_Liver_cholangiocarcinoma_B_K2D46853312   
SAGE_Ovary_adenocarcinoma_B_OVT-831987212   
SAGE_Pancreas_adenocarcinoma_B_96-625233213212   
SAGE_Prostate_adenocarcinoma_MD_PR31764951412   
SAGE_Stomach_adenocarcinoma_MD_G32946802312   
SAGE_Stomach_adenocarcinoma_MD_HG793714612   
SAGE_Stomach_carcinoma_B_G18963075412   
SAGE_Brain_astrocytoma_grade_III_B_H970106982611   
SAGE_Brain_ependymoma_B_R45551825311   
SAGE_Brain_meningioma_grade_I_B_SF427169253411   
SAGE_Breast_carcinoma_B_95-34767070411   
SAGE_Lung_adenocarcinoma_MD_L935916211   
SAGE_Uterus_normal_B_hs0195371846321311   
SAGE_Brain_glioblastoma_B_pooled56428310   
SAGE_Breast_normal_epithelium_MUC1+_AP_N576227410   
SAGE_Colon_adenocarcinoma_CL_HCT11655641310   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES1151735810   
SAGE_Peripheral_Blood_Cancer_B_hs0430639970535110   
SAGE_Prostate_normal_MD_PR31759277310   
SAGE_Thyroid_normal_B_001115938610   
SAGE_Vascular_endothelium_normal_breast_associated_P1H12+_AP_157023310   
SAGE_Bladder_Cancer_B_hs024062164262869   
SAGE_Brain_astrocytoma_grade_III_B_34310015859   
SAGE_Brain_astrocytoma_grade_III_B_43910782459   
SAGE_Brain_astrocytoma_grade_II_B_H38810628559   
SAGE_Brain_astrocytoma_grade_II_B_H51610811659   
SAGE_Brain_medulloblastoma_CL_4-HCR6659939   
SAGE_Brain_medulloblastoma_CL_H3414392029   
SAGE_Brain_normal_cerebellum_B_BB5424050029   
SAGE_Breast_carcinoma_B_CT15_IDC2184019   
SAGE_Breast_carcinoma_B_DCIS-54309829   
SAGE_Breast_carcinoma_B_IDC-56045139   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS-26616839   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N156399439   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIFK08594449   
SAGE_Embryonic_stem_cell_H1_normal_p31_CL_SHE17276203139   
SAGE_Kidney_embryonic_CL_293-control4195529   
SAGE_Ovary_adenocarcinoma_B_OVT-64144329   
SAGE_Ovary_carcinoma_CL_A27802136919   
SAGE_Peripheral_Blood_Cancer_B_hs042957568482839   
SAGE_Prostate_carcinoma_CL_PC3_AS24076829   
SAGE_Rheumatoid_arthritis_synovial_fibroblast_CS4247229   
SAGE_Uterus_endometrium_normal_CS_DI12199119   
SAGE_Bladder_Cancer_B_hs026642446121718   
SAGE_Brain_ependymoma_B_2394665328   
SAGE_Brain_glioblastoma_hypoxia_CL_H2477176538   
SAGE_Brain_medulloblastoma_B_DL76839238   
SAGE_Brain_normal_thalamus_B_12401518   
SAGE_Breast_carcinoma_epithelium_BEREP4+_AP_DCIS78918448   
SAGE_Breast_carcinoma_metastasis_B_24979428   
SAGE_Embryonic_stem_cell_HSF6_normal_p50_CL_SHES922448898   
SAGE_Eye_Retinoblastoma_B_hs0389124342325368   
SAGE_Kidney_embryonic_CL_293+beta-catenin2351918   
SAGE_Lymph_Node_Lymphoma_B_17200838   
SAGE_Lymph_Node_normal_B_19942648   
SAGE_Stomach_carcinoma_B_xenograft_X1016974938   
SAGE_Testis_Embryonal_Carcinoma_CL_hs021359354902498   
SAGE_White_Blood_Cells_monocytes_normal_AP_A29878648   
SAGE_Brain_astrocytoma_grade_III_B_H10205157327   
SAGE_Breast_Carcinoma_CD24+_C2_IDC3447209601717   
SAGE_Breast_Normal_Epithelium_CD44+_N7_N58110078643987   
SAGE_Breast_carcinoma_epithelium_PROCR+_AP_IDC295408027   
SAGE_Breast_fibroadenoma_MD5568827   
SAGE_Breast_normal_epithelium_CD24+_AP_N57646937   
SAGE_Embryonic_stem_cell_BG01_normal_p20_CL_SHE1920166887   
SAGE_Liver_cholangiocarcinoma_CL_K45297327   
SAGE_Peritoneum_normal_B_135352727   
SAGE_Placenta_hydatidiform_mole_B_110167747   
SAGE_Skin_Normal_B_hs027243975501557   
SAGE_White_Blood_Cells_plaque_macrophage_normal_AP_P25029727   
SAGE_Bone_Marrow_AML_FS_CD34+CD38+6151926   
SAGE_Bone_marrow_normal_AP_CD34+/CD38-/lin-8639136   
SAGE_Brain_medulloblastoma_CL_D2836631626   
SAGE_Breast_Normal_Epithelium_CD24+_N4_N481802274576   
SAGE_Breast_carcinoma_B_DCIS-46060526   
SAGE_Breast_carcinoma_B_IDC-46409526   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC96353926   
SAGE_Embryonic_stem_cell_H14_normal_p22_CL_SHE1421217076   
SAGE_Embryonic_stem_cell_H9_normal_p38_CL_SHES2401432146   
SAGE_Embryonic_stem_cell_HES3_normal_p16_CL_SHE1020535376   
SAGE_Lung_adenocarcinoma_MD_L108688736   
SAGE_Ovary_carcinoma_CL_ES2-13115916   
SAGE_Pancreas_normal_CS_H1263222316   
SAGE_Pancreas_normal_CS_HX3198516   
SAGE_Peritoneum_mesothelioma_B_123252916   
SAGE_Retinal_Pigment_Epithelium_normal_B_4PeriRPE9019936   
SAGE_Stomach_adenocarcinoma_MD_HS295883126   
SAGE_White_Blood_Cells_normal_breast_associated_CD45+_AP3198516   
SAGE_Brain_astrocytoma_grade_III_B_40710831235   
SAGE_Brain_astrocytoma_grade_II_B_H51811602235   
SAGE_Brain_medulloblastoma_B_97-05-P3127429525   
SAGE_Breast_carcinoma_B_IDC-36889125   
SAGE_Breast_carcinoma_epithelium_X_MUC1+_AP7514725   
SAGE_Embryo_Pre-Cancer_B_hs032468930161785   
SAGE_Embryonic_stem_cell_normal_CL_hs02383636083965   
SAGE_GallBladder_Adenocarcinoma_B_HAIIb6698825   
SAGE_Lung_adenocarcinoma_B_13625615   
SAGE_Pancreas_adenocarcinoma_CL_CAPAN13767415   
SAGE_Retina_Peripheral_normal_B_210531235   
SAGE_Skin_Cancer_B_hs028438925071005   
SAGE_Skin_normal_B_NS3661515   
SAGE_Vein_normal_B_hs023067556221715   
SAGE_White_Blood_Cells_breast_carcinoma_associated_CD45+_AP_IDC73439915   
SAGE_Bone_marrow_normal_AP_CD34+/CD38+/lin+8159524   
SAGE_Breast_Carcinoma_EPCR+_C5_IDC273796568874   
SAGE_Breast_Carcinoma_EPCR+_C6_IDC314208755934   
SAGE_Breast_carcinoma_CL_MDA435C4727014   
SAGE_Breast_carcinoma_CL_MDA435H484032314   
SAGE_Breast_carcinoma_associated_myoepithelium_CD10+_AP_DCIS68145224   
SAGE_Breast_metastatic_carcinoma_B_LN14508714   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGX08843924   
SAGE_Lung_normal_CL_L154222614   
SAGE_Lung_tumor_associated_chronic_inflammation_B_UIHM09896224   
SAGE_Lymph_node_Lymphoma_B_hs019647914811024   
SAGE_Ovary_normal_CL_IOSE29EC-114715914   
SAGE_Ovary_normal_CS_HOSE_44772814   
SAGE_Retina_Peripheral_normal_B_4Peri12669134   
SAGE_Skin_Normal_B_hs028165170891454   
SAGE_Skin_Normal_B_hs028244116361014   
SAGE_Stomach_normal_MD_13S4590814   
SAGE_Vein_normal_B_hs023761356881344   
SAGE_White_Blood_Cells_monocyte_normal_AP_A19991324   
SAGE_Brain_Medulloblastoma_CL_425C26264213   
SAGE_Brain_glioblastoma_CL_H3925599013   
SAGE_Brain_glioblastoma_CL_H54+EGFRvIII5698213   
SAGE_Brain_glioblastoma_CL_stem_cells10841423   
SAGE_Brain_glioblastoma_control_CL_H2476042813   
SAGE_Brain_normal_cortex_B_pool66245113   
SAGE_Breast_Carcinoma_CD24+_C1_IDC314286604823   
SAGE_Breast_carcinoma_CL_MCF7estradiol_3h6016213   
SAGE_Breast_carcinoma_associated_myoepithelium_CD10+_AP_DCIS75199313   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC76509113   
SAGE_Breast_carcinoma_epithelium_BerEP4+_AP_IDC86652013   
SAGE_Breast_normal_B_gestational hyperplasia16170413   
SAGE_Breast_normal_epithelium_BEREP4+_AP_N25051213   
SAGE_Breast_normal_epithelium_CD44+_AP_N25600813   
SAGE_Breast_normal_myoepithelium_CD10+_AP_N15722213   
SAGE_Breast_normal_stroma_B_IDC85048513   
SAGE_Colon_adenocarcinoma_CL_Caco26068213   
SAGE_Colon_adenocarcinoma_CL_SW8376114813   
SAGE_Embryonic_stem_cell_H7_normal_p33_CL_SHE1327246553   
SAGE_Embryonic_stem_cell_HES4_normal_p36_CL_SHE1120923243   
SAGE_Liver_normal_B_16630813   
SAGE_Muscle_Rhabdomyosarcoma_B_16127013   
SAGE_Muscle_normal_B_young5394713   
SAGE_Prostate_carcinoma_CL_LNCaP6025013   
SAGE_Retina_Macula_normal_B_4Mac10141723   
SAGE_Retina_Peripheral_normal_B_15966113   
SAGE_Retina_macula_normal_B_HMAC210241723   
SAGE_Skin_Cancer_B_hs02803618498713   
SAGE_Skin_Melanoma_B_hs02754128221813   
SAGE_Skin_Normal_B_hs02775269789823   
SAGE_Skin_Normal_B_hs02783042221483   
SAGE_Testis_Embryonal_Carcinoma_CL_hs021263701611043   
SAGE_Urothelium_normal_B_hs02393114307553   
SAGE_Vascular_normal_CS_VEGF+5731613   
SAGE_Vascular_normal_CS_control5164213   
SAGE_White_Blood_Cells_lung_macrophage_normal_AP_L15187213   
SAGE_White_Blood_Cells_monocyte_depleted_mononuclear_cells_normal_AP_A15379513   
SAGE_White_Blood_Cells_monocyte_depleted_mononuclear_cells_normal_AP_P15163413   
SAGE_Bone_Marrow_Cancer_FS_hs04054900037662   
SAGE_Brain_Medulloblastoma_CL_425Otx2siRNA9729112   
SAGE_Brain_Medulloblastoma_CL_UW228-V28082712   
SAGE_Brain_astrocytoma_grade_I_B_H10437592212   
SAGE_Brain_ependymoma_B_H5806861412   
SAGE_Brain_glioblastoma_B_H11106898612   
SAGE_Brain_glioblastoma_CL_H54+LacZ6690812   
SAGE_Brain_normal_cortex_B_BB5429423312   
SAGE_Brain_normal_peds_cortex_B_H15717755412   
SAGE_Breast_carcinoma_associated_myofibroblast_CD10+_AP_IDC87396712   
SAGE_Breast_normal_epithelium_CD44+_AP_N58046412   
SAGE_Cartilage_chondrosarcoma_grade_2_CL_UIFU07501912   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Anoxia7905312   
SAGE_Colon_carcinoma_CL_Hct116_p53_knockout_Normal_Oxygen7928412   
SAGE_Colon_carcinoma_CL_Hct116_wildtype_p53_Anoxia7901512   
SAGE_Embryonic_stem_cell_H13_normal_p22_CL_SHE1522110132   
SAGE_Esophagus_Dysplasia_B_LGD017490412   
SAGE_Eye_lens_B_UIHI08589812   
SAGE_Foreskin_normal_B_hs03053940350452   
SAGE_GallBladder_Adenocarcinoma_B_C018138012   
SAGE_GallBladder_Normal_B_HN8570612   
SAGE_Heart_normal_B_18306312   
SAGE_Prostate_normal_epithelium_CS_confluent7189712   
SAGE_Skin_Cancer_B_hs02833692239382   
SAGE_Skin_Normal_B_hs02715807686772   
SAGE_Vascular_endothelium_normal_liver_associated_AP_NLEC17775912   
SAGE_Brain_fetal_normal_B_S130554631   
SAGE_Brain_glioblastoma_CL_28d11062411   
SAGE_Brain_glioblastoma_CL_4d11521211   
SAGE_Breast_Normal_Epithelium_CD24+_N3_N473036002281   
SAGE_Breast_Normal_Epithelium_CD44+_N6_N48104876561   
SAGE_Cartilage_dedifferentiated_chondrosarcoma_metastasis_CL_UIGP010831911   
SAGE_Embryonic_stem_cell_H1_normal_p54_CL_SHE1621821421   
SAGE_Retina_normal_B_4cRet10370111   
SAGE_White_Blood_Cells_monocyte_normal_AP_P110115811   
SAGE_White_Blood_Cells_monocytes_normal_AP_C110165611   
SAGE_Bone_Marrow_Normal_FS_hs04044842547100   
SAGE_Breast_Normal_Epithelium_CD24+_N1_N339646880400   
SAGE_Breast_Normal_Epithelium_CD24+_N2_N3513584223520   
SAGE_Breast_Normal_Epithelium_CD44+_N5_N47189093870